Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.13G140000 Glycine max HOM05D009612 ORTHO05D010824 2.0e-22 108.2 54 100.0
Phvul.007G220400 Phaseolus vulgaris HOM05D009612 ORTHO05D010824 2.7e-19 97.8 53 90.6
Glyma.10G053000 Glycine max HOM05D009612 ORTHO05D010824 1.3e-18 95.5 54 92.6
Lalb_Chr21g0314811 Lupinus albus HOM05D009612 ORTHO05D010824 9.8e-14 79.3 44 84.1
COL.COLO4_27026 Corchorus olitorius HOM05D009612 ORTHO05D010824 2.7e-11 71.2 46 73.9
Phvul.001G177100 Phaseolus vulgaris HOM05D009612 ORTHO05D010824 2.7e-11 71.2 50 70.0
Thecc.05G060400 Theobroma cacao HOM05D009612 ORTHO05D010824 1.0e-10 69.3 46 67.4
Glyma.03G181000 Glycine max HOM05D009612 ORTHO05D010824 3.9e-10 67.4 37 83.8
Gohir.D13G024100 Gossypium hirsutum HOM05D009612 ORTHO05D010824 3.9e-10 67.4 46 71.7
Gorai.013G027200 Gossypium raimondii HOM05D009612 ORTHO05D010824 3.9e-10 67.4 46 71.7
Glyma.19G181700 Glycine max HOM05D009612 ORTHO05D010824 6.6e-10 66.6 40 80.0
Gohir.A13G025500 Gossypium hirsutum HOM05D009612 ORTHO05D010824 8.6e-10 66.2 46 69.6
Lalb_Chr01g0018831 Lupinus albus HOM05D009612 ORTHO05D010824 8.6e-10 66.2 51 72.5
Prupe.6G236900 Prunus persica HOM05D009612 ORTHO05D010824 3.3e-09 64.3 44 68.2
COL.COLO4_27027 Corchorus olitorius HOM05D010724 ORTHO05D010824 4.7e-08 60.5 44 68.2
FAN14G2400 Fragaria x ananassa HOM05D001565 ORTHO05D001725 4.7e-08 60.5 45 64.4
Hma1.2p1_0205F.1_g087490 Hydrangea macrophylla HOM05D009612 ORTHO05D010824 8.0e-08 59.7 47 61.7
CiPaw.10G133900 Carya illinoinensis HOM05D009612 ORTHO05D010824 1.0e-07 59.3 42 71.4
Manes.09G068872 Manihot esculenta HOM05D009612 ORTHO05D010824 1.0e-07 59.3 43 67.4
Potri.006G128300 Populus trichocarpa HOM05D009612 ORTHO05D010824 1.8e-07 58.5 44 61.4
CANSAT80G2554 Cannabis sativa HOM05D009612 ORTHO05D010824 3.1e-07 57.8 48 62.5
QL07p044551 Quercus lobata HOM05D010724 ORTHO05D010824 3.1e-07 57.8 44 68.2
Thecc.05G060300 Theobroma cacao HOM05D010724 ORTHO05D010824 3.1e-07 57.8 44 65.9
Nn3g20424 Nelumbo nucifera HOM05D010724 ORTHO05D010824 4.0e-07 57.4 48 58.3
Nn3g20444 Nelumbo nucifera HOM05D009612 ORTHO05D010824 5.2e-07 57.0 51 54.9
Oeu059089.1 Olea europaea HOM05D009612 ORTHO05D010824 8.9e-07 56.2 44 63.6
Potri.016G089400 Populus trichocarpa HOM05D010724 ORTHO05D010824 8.9e-07 56.2 44 70.5
Haze_20597 Corylus avellana HOM05D010724 ORTHO05D010824 1.2e-06 55.8 44 63.6
Cc07_g13770 Coffea canephora HOM05D023480 ORTHO05D025134 1.5e-06 55.5 44 56.8
Migut.J00547 Erythranthe guttata HOM05D009612 ORTHO05D010824 1.5e-06 55.5 40 57.5
Lalb_Chr02g0156161 Lupinus albus HOM05D009612 ORTHO05D238678 2.0e-06 55.1 27 92.6
Nn2g13096 Nelumbo nucifera HOM05D009612 ORTHO05D010824 2.6e-06 54.7 42 64.3
Gohir.A04G074400 Gossypium hirsutum HOM05D010724 ORTHO05D010824 4.4e-06 53.9 46 60.9


User provided reference genes

Program Settings