Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.13G138100 Glycine max HOM05D007569 ORTHO05D009268 8.9e-53 209.9 100 100.0
Glyma.10G050600 Glycine max HOM05D007569 ORTHO05D009268 1.5e-44 182.6 98 91.8
Phvul.007G107600 Phaseolus vulgaris HOM05D007569 ORTHO05D009268 5.4e-26 120.9 97 73.2
Lj5g0021553 Lotus japonicus HOM05D007569 ORTHO05D009268 1.7e-19 99.4 101 63.4
Psat6g070160 Pisum sativum HOM05D007569 ORTHO05D009268 1.6e-14 82.8 101 55.4
Medtr7g100860 Medicago truncatula HOM05D007569 ORTHO05D009268 1.1e-13 80.1 103 54.4
Medtr1g066720 Medicago truncatula HOM05D007569 ORTHO05D009268 2.4e-13 79.0 97 54.6
TPR.G28044 Trifolium pratense HOM05D007569 ORTHO05D009268 2.6e-12 75.5 94 55.3
QL07p045078 Quercus lobata HOM05D007569 ORTHO05D009268 5.8e-12 74.3 96 45.8
CiPaw.09G178900 Carya illinoinensis HOM05D007569 ORTHO05D009268 2.2e-11 72.4 100 47.0
Haze_20627 Corylus avellana HOM05D007569 ORTHO05D009268 4.9e-11 71.2 97 44.3
Actinidia19698 Actinidia chinensis HOM05D007569 ORTHO05D009268 6.5e-11 70.9 99 50.5
Potri.016G087000 Populus trichocarpa HOM05D007569 ORTHO05D009268 1.1e-10 70.1 97 49.5
CiPaw.10G136600 Carya illinoinensis HOM05D007569 ORTHO05D009268 3.2e-10 68.6 97 50.5
Thecc.05G055900 Theobroma cacao HOM05D007569 ORTHO05D009268 3.2e-10 68.6 86 43.0
Ciclev10013224m.g Citrus clementina HOM05D007569 ORTHO05D009268 4.2e-10 68.2 97 49.5
Psat3g044160 Pisum sativum HOM05D007569 ORTHO05D009268 4.2e-10 68.2 64 59.4
Potri.006G130400 Populus trichocarpa HOM05D007569 ORTHO05D009268 4.2e-10 68.2 98 43.9
COL.COLO4_27060 Corchorus olitorius HOM05D007569 ORTHO05D009268 5.5e-10 67.8 88 50.0
CiPaw.10G136400 Carya illinoinensis HOM05D007569 ORTHO05D009268 7.1e-10 67.4 97 49.5
Duzib093G0005 Durio zibethinus HOM05D007569 ORTHO05D009268 9.3e-10 67.0 86 48.8
Lalb_Chr25g0289201 Lupinus albus HOM05D007569 ORTHO05D009268 9.3e-10 67.0 102 45.1
AT5G03120 Arabidopsis thaliana HOM05D007569 ORTHO05D009268 6.0e-09 64.3 78 44.9
Sabra16G0093200 Salix brachista HOM05D007569 ORTHO05D009268 6.0e-09 64.3 98 50.0
Lsat_1_v5_gn_6_30260 Lactuca sativa HOM05D007569 ORTHO05D009268 1.0e-08 63.5 101 41.6
MD04G1102400 Malus domestica HOM05D007569 ORTHO05D009268 1.8e-08 62.8 99 42.4
Prupe.6G240500 Prunus persica HOM05D007569 ORTHO05D009268 1.8e-08 62.8 98 45.9
Gorai.013G026900 Gossypium raimondii HOM05D007569 ORTHO05D009268 3.0e-08 62.0 86 44.2
Lalb_Chr01g0018971 Lupinus albus HOM05D007569 ORTHO05D009268 3.0e-08 62.0 104 43.3
Manes.08G004500 Manihot esculenta HOM05D007569 ORTHO05D009268 3.9e-08 61.6 99 40.4
TAR623G1008 Trochodendron aralioides HOM05D007569 ORTHO05D009268 3.9e-08 61.6 57 61.4
AL6G12400 Arabidopsis lyrata HOM05D007569 ORTHO05D009268 5.1e-08 61.2 70 48.6
Nitab4.5_0000669g0110 Nicotiana tabacum HOM05D007569 ORTHO05D009268 5.1e-08 61.2 101 42.6
PGR004G0018 Punica granatum HOM05D007569 ORTHO05D009268 6.7e-08 60.8 102 40.2
Cpa.g.sc368.3 Carica papaya HOM05D007569 ORTHO05D009268 8.7e-08 60.5 97 47.4
Dinv35729 Davidia involucrata HOM05D007569 ORTHO05D009268 8.7e-08 60.5 100 44.0
RcHm_v2.0_Chr3g0469031 Rosa chinensis HOM05D007569 ORTHO05D009268 1.1e-07 60.1 99 45.5
Actinidia05265 Actinidia chinensis HOM05D007569 ORTHO05D009268 1.5e-07 59.7 100 42.0
arahy.Tifrunner.gnm1.ann1.PY3JPZ Arachis hypogaea HOM05D007569 ORTHO05D009268 1.9e-07 59.3 77 51.9
Peaxi162Scf00005g00394 Petunia axillaris HOM05D007569 ORTHO05D009268 1.9e-07 59.3 102 42.2
Manes.09G078021 Manihot esculenta HOM05D007569 ORTHO05D009268 4.3e-07 58.2 97 39.2
CSS0032625 Camellia sinensis var. sinensis HOM05D007569 ORTHO05D009268 5.7e-07 57.8 99 38.4
Gohir.D13G023800 Gossypium hirsutum HOM05D007569 ORTHO05D009268 5.7e-07 57.8 86 43.0
GSVIVG01025645001 Vitis vinifera HOM05D007569 ORTHO05D009268 5.7e-07 57.8 77 49.4
Carub.0006s0192 Capsella rubella HOM05D007569 ORTHO05D009268 7.4e-07 57.4 65 49.2
DCAR_020844 Daucus carota HOM05D007569 ORTHO05D009268 1.3e-06 56.6 43 55.8
Nitab4.5_0006156g0030 Nicotiana tabacum HOM05D007569 ORTHO05D009268 1.3e-06 56.6 100 41.0
arahy.Tifrunner.gnm1.ann1.4H2E4D Arachis hypogaea HOM05D007569 ORTHO05D009268 1.6e-06 56.2 72 52.8
CARHR210230 Cardamine hirsuta HOM05D007569 ORTHO05D009268 1.6e-06 56.2 57 54.4
Nitab4.5_0003871g0030 Nicotiana tabacum HOM05D007569 ORTHO05D009268 1.6e-06 56.2 99 39.4
Gohir.A13G025100 Gossypium hirsutum HOM05D007569 ORTHO05D009268 2.1e-06 55.8 86 41.9
Sp6g39590 Schrenkiella parvula HOM05D007569 ORTHO05D009268 2.8e-06 55.5 60 51.7
Thhalv10015759m.g Eutrema salsugineum HOM05D007569 ORTHO05D009268 3.7e-06 55.1 60 53.3
Sabra06G0102400 Salix brachista HOM05D007569 ORTHO05D009268 3.7e-06 55.1 53 50.9
Gorai.002G249500 Gossypium raimondii HOM05D007569 ORTHO05D009268 4.8e-06 54.7 73 42.5
BraA02t04745Z Brassica rapa HOM05D007569 ORTHO05D009268 6.2e-06 54.3 82 43.9
FvH4_6g15530 Fragaria vesca HOM05D007569 ORTHO05D009268 6.2e-06 54.3 104 42.3
FAN14G4266 Fragaria x ananassa HOM05D007569 ORTHO05D009268 6.2e-06 54.3 104 42.3
Gohir.A01G216400 Gossypium hirsutum HOM05D007569 ORTHO05D009268 6.2e-06 54.3 73 42.5
RhsimUnG0115600 Rhododendron simsii HOM05D007569 ORTHO05D009268 6.2e-06 54.3 83 45.8


User provided reference genes

Program Settings