Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.13G132002 Glycine max HOM05D004206 ORTHO05D003325 8.9e-69 263.5 132 100.0
Glyma.10G044400 Glycine max HOM05D004206 ORTHO05D003325 5.5e-42 174.5 114 82.5
VMungo0720G2610 Vigna mungo HOM05D004206 ORTHO05D003325 1.4e-34 149.8 117 71.8
Phvul.007G158100 Phaseolus vulgaris HOM05D004206 ORTHO05D003325 2.7e-33 145.6 117 70.9
Ca_09615_v3 Cicer arietinum L. HOM05D004206 ORTHO05D003325 1.0e-24 117.1 133 56.4
Lalb_Chr02g0153081 Lupinus albus HOM05D004206 ORTHO05D003325 4.1e-21 105.1 125 55.2
Lalb_Chr06g0171041 Lupinus albus HOM05D004206 ORTHO05D003325 1.4e-18 96.7 116 54.3
Lalb_Chr21g0314341 Lupinus albus HOM05D004206 ORTHO05D003325 1.6e-17 93.2 121 50.4
Lj5g0023302 Lotus japonicus HOM05D004206 ORTHO05D003325 1.0e-16 90.5 111 52.3
Psat6g067720 Pisum sativum HOM05D004206 ORTHO05D003325 3.9e-16 88.6 134 47.0
Ca_08787_v3 Cicer arietinum L. HOM05D004206 ORTHO05D003325 2.0e-15 86.3 132 44.7
Glyma.19G173300 Glycine max HOM05D004206 ORTHO05D003325 1.3e-14 83.6 126 46.0
Lalb_Chr25g0289551 Lupinus albus HOM05D004206 ORTHO05D003325 1.3e-14 83.6 124 48.4
Glyma.03G172400 Glycine max HOM05D004206 ORTHO05D003325 4.8e-14 81.6 126 44.4
Medtr1g068825 Medicago truncatula HOM05D004206 ORTHO05D003325 1.1e-13 80.5 106 50.9
Phvul.001G170100 Phaseolus vulgaris HOM05D004206 ORTHO05D003325 1.4e-13 80.1 120 48.3
Lalb_Chr20g0113171 Lupinus albus HOM05D004206 ORTHO05D003325 1.2e-12 77.0 127 44.9
RcHm_v2.0_Chr3g0467301 Rosa chinensis HOM05D004206 ORTHO05D003325 7.7e-12 74.3 120 44.2
arahy.Tifrunner.gnm1.ann1.72TEPU Arachis hypogaea HOM05D004206 ORTHO05D003325 1.3e-11 73.6 141 39.0
FvH4_6g14310 Fragaria vesca HOM05D004206 ORTHO05D003325 1.3e-11 73.6 120 47.5
FAN05G4716 Fragaria x ananassa HOM05D004206 ORTHO05D003325 1.3e-11 73.6 121 47.1
FAN02G2861 Fragaria x ananassa HOM05D004206 ORTHO05D003325 1.7e-11 73.2 120 47.5
FAN09G1551 Fragaria x ananassa HOM05D004206 ORTHO05D003325 1.7e-11 73.2 120 47.5
Gohir.A04G080300 Gossypium hirsutum HOM05D004206 ORTHO05D003325 2.2e-11 72.8 136 39.7
MD12G1138400 Malus domestica HOM05D004206 ORTHO05D003325 6.5e-11 71.2 122 44.3
VMungo1383G1995 Vigna mungo HOM05D004206 ORTHO05D003325 6.5e-11 71.2 130 44.6
TPR.G25989 Trifolium pratense HOM05D004206 ORTHO05D003325 8.5e-11 70.9 107 44.9
Medtr7g099950 Medicago truncatula HOM05D004206 ORTHO05D003325 3.2e-10 68.9 125 40.0
Duzib093G1984 Durio zibethinus HOM05D004206 ORTHO05D003325 4.2e-10 68.6 135 39.3
Aa31LG10G9300 Aethionema arabicum HOM05D008508 ORTHO05D003325 5.5e-10 68.2 63 61.9
GSVIVG01025530001 Vitis vinifera HOM05D004206 ORTHO05D003325 5.5e-10 68.2 125 39.2
Lj1g0028211 Lotus japonicus HOM05D004206 ORTHO05D003325 9.4e-10 67.4 40 80.0
Atru.chr8.1956 Acer truncatum HOM05D004206 ORTHO05D003325 2.1e-09 66.2 128 40.6
Aqoxy2G02033 Aquilegia oxysepala HOM05D004206 ORTHO05D003325 3.6e-09 65.5 120 40.0
Prupe.6G250300 Prunus persica HOM05D004206 ORTHO05D003325 4.7e-09 65.1 122 42.6
Duzib106G1929 Durio zibethinus HOM05D004206 ORTHO05D003325 1.0e-08 63.9 133 39.1
MD04G1121200 Malus domestica HOM05D004206 ORTHO05D003325 1.4e-08 63.5 121 40.5
Rhsim05G0188200 Rhododendron simsii HOM05D004206 ORTHO05D003325 1.8e-08 63.2 134 37.3
Psat3g048840 Pisum sativum HOM05D004206 ORTHO05D003325 2.3e-08 62.8 42 69.0
Gohir.D04G119400 Gossypium hirsutum HOM05D004206 ORTHO05D003325 3.0e-08 62.4 135 39.3
Gorai.012G101500 Gossypium raimondii HOM05D004206 ORTHO05D003325 3.0e-08 62.4 135 39.3
Psat2g133080 Pisum sativum HOM05D000159 ORTHO05D000148 3.0e-08 62.4 42 69.0
TAR371G1160 Trochodendron aralioides HOM05D004206 ORTHO05D003325 3.0e-08 62.4 75 52.0
Dinv35636 Davidia involucrata HOM05D004206 ORTHO05D003325 5.2e-08 61.6 125 40.0
Potri.006G082100 Populus trichocarpa HOM05D004206 ORTHO05D003325 6.7e-08 61.2 41 65.9
Thecc.05G044400 Theobroma cacao HOM05D004206 ORTHO05D003325 8.8e-08 60.8 133 34.6
MSTRG.26756 Avicennia marina HOM05D004206 ORTHO05D003325 1.5e-07 60.1 119 38.7
CANSAT35G0311 Cannabis sativa HOM05D004206 ORTHO05D003325 1.5e-07 60.1 134 35.1
DCAR_009254 Daucus carota HOM05D004206 ORTHO05D003325 1.5e-07 60.1 129 38.8
TAR633G1790 Trochodendron aralioides HOM05D004206 ORTHO05D003325 2.0e-07 59.7 80 48.8
MSTRG.5685 Avicennia marina HOM05D004206 ORTHO05D003325 2.6e-07 59.3 126 42.1
Sc20g0004600 Simmondsia chinensis HOM05D004206 ORTHO05D003325 4.4e-07 58.5 77 54.5
Hma1.2p1_1707F.1_g298550 Hydrangea macrophylla HOM05D004206 ORTHO05D003325 7.5e-07 57.8 120 38.3
Carub.0005s2025 Capsella rubella HOM05D008508 ORTHO05D003325 1.3e-06 57.0 55 58.2
Manes.08G076700 Manihot esculenta HOM05D004206 ORTHO05D003325 1.3e-06 57.0 117 36.8
AUR62037393 Chenopodium quinoa HOM05D004206 ORTHO05D003325 1.7e-06 56.6 99 40.4
Nitab4.5_0000349g0070 Nicotiana tabacum HOM05D004206 ORTHO05D003325 2.2e-06 56.2 56 60.7
TPR.G21456 Trifolium pratense HOM05D004206 ORTHO05D003325 2.2e-06 56.2 88 38.6
ATR0559G289 Amborella trichopoda HOM05D004206 ORTHO05D003325 2.8e-06 55.8 45 60.0
CARHR132120 Cardamine hirsuta HOM05D008508 ORTHO05D003325 2.8e-06 55.8 73 50.7
Manes.09G086700 Manihot esculenta HOM05D004206 ORTHO05D003325 3.7e-06 55.5 41 61.0
Aqoxy4G02996 Aquilegia oxysepala HOM05D004206 ORTHO05D003325 4.8e-06 55.1 124 37.1
AT3G53670 Arabidopsis thaliana HOM05D008508 ORTHO05D003325 4.8e-06 55.1 55 56.4
Migut.J00362 Erythranthe guttata HOM05D004206 ORTHO05D003325 4.8e-06 55.1 130 33.8
Cc06_g02970 Coffea canephora HOM05D004206 ORTHO05D003325 6.3e-06 54.7 72 47.2
Hma1.2p1_0350F.1_g132380 Hydrangea macrophylla HOM05D004206 ORTHO05D003325 6.3e-06 54.7 127 37.8
Hma1.2p1_1065F.1_g253750 Hydrangea macrophylla HOM05D004206 ORTHO05D003325 6.3e-06 54.7 127 37.8
Hund07780 Selenicereus undatus HOM05D004206 ORTHO05D003325 6.3e-06 54.7 137 38.0
Actinidia26442 Actinidia chinensis HOM05D004206 ORTHO05D003325 8.2e-06 54.3 95 40.0
CSS0004803 Camellia sinensis var. sinensis HOM05D004206 ORTHO05D003325 8.2e-06 54.3 126 38.9
Solyc10g086360.2 Solanum lycopersicum HOM05D004206 ORTHO05D003325 8.2e-06 54.3 54 55.6
TWI74G0821 Tripterygium wilfordii HOM05D004206 ORTHO05D003325 8.2e-06 54.3 117 40.2


User provided reference genes

Program Settings