Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.13G131900 Glycine max HOM05D004269 ORTHO05D007106 1.5e-259 899.0 465 100.0
Glyma.10G044300 Glycine max HOM05D004269 ORTHO05D007106 1.3e-244 849.4 465 95.1
Phvul.007G158000 Phaseolus vulgaris HOM05D004269 ORTHO05D007106 8.7e-244 846.7 465 93.3
Lalb_Chr06g0171031 Lupinus albus HOM05D004269 ORTHO05D007106 3.0e-228 795.0 473 86.9
Ca_09614_v3 Cicer arietinum L. HOM05D004269 ORTHO05D007106 7.4e-227 790.4 470 88.1
Lj5g0017615 Lotus japonicus HOM05D004269 ORTHO05D007106 1.7e-226 789.3 468 88.5
Medtr1g068845 Medicago truncatula HOM05D004269 ORTHO05D007106 2.8e-226 788.5 471 87.9
Psat6g067760 Pisum sativum HOM05D004269 ORTHO05D007106 1.1e-222 776.5 470 86.4
arahy.Tifrunner.gnm1.ann1.FJP50F Arachis hypogaea HOM05D004269 ORTHO05D007106 6.7e-220 767.3 471 84.9
arahy.Tifrunner.gnm1.ann1.5YT5MY Arachis hypogaea HOM05D004269 ORTHO05D007106 4.2e-214 748.0 447 86.8
Atru.chr8.1955 Acer truncatum HOM05D004269 ORTHO05D007106 1.1e-201 706.8 470 78.3
QL07p047335 Quercus lobata HOM05D004269 ORTHO05D007106 9.1e-201 703.7 447 82.6
Prupe.6G250400 Prunus persica HOM05D004269 ORTHO05D007106 1.2e-200 703.4 469 78.7
FvH4_6g14300 Fragaria vesca HOM05D004269 ORTHO05D007106 8.5e-199 697.2 469 77.6
QL05p010548 Quercus lobata HOM05D004269 ORTHO05D007106 1.9e-198 696.0 447 81.9
Potri.012G115900 Populus trichocarpa HOM05D004269 ORTHO05D007106 7.2e-198 694.1 482 76.1
RcHm_v2.0_Chr3g0467271 Rosa chinensis HOM05D004269 ORTHO05D007106 1.2e-197 693.3 469 76.8
CANSAT56G4185 Cannabis sativa HOM05D004269 ORTHO05D007106 2.7e-197 692.2 447 80.3
MD04G1121900 Malus domestica HOM05D004269 ORTHO05D007106 6.1e-197 691.0 469 78.3
TAR369G0704 Trochodendron aralioides HOM05D004269 ORTHO05D007106 1.0e-196 690.3 447 80.5
Lj2C99G10 Lonicera japonica HOM05D004269 ORTHO05D007106 5.2e-196 688.0 447 80.5
QL09p012946 Quercus lobata HOM05D004269 ORTHO05D007106 5.2e-196 688.0 466 78.3
Ciclev10011653m.g Citrus clementina HOM05D004269 ORTHO05D007106 8.8e-196 687.2 472 76.9
arahy.Tifrunner.gnm1.ann1.L55DKK Arachis hypogaea HOM05D004269 ORTHO05D007106 1.2e-195 686.8 420 86.4
Dinv35635 Davidia involucrata HOM05D004269 ORTHO05D007106 2.0e-195 686.0 471 77.3
MD12G1138500 Malus domestica HOM05D004269 ORTHO05D007106 5.7e-195 684.5 446 80.5
GSVIVG01025529001 Vitis vinifera HOM05D004269 ORTHO05D007106 2.8e-194 682.2 471 76.6
Eucgr.K03158 Eucalyptus grandis HOM05D004269 ORTHO05D007106 1.1e-193 680.2 470 75.3
CSS0004421 Camellia sinensis var. sinensis HOM05D004269 ORTHO05D007106 3.1e-193 678.7 447 78.7
TWI74G1158 Tripterygium wilfordii HOM05D004269 ORTHO05D007106 1.2e-192 676.8 472 76.1
FAN02G4217 Fragaria x ananassa HOM05D004269 ORTHO05D007106 1.6e-192 676.4 469 75.9
PSO206G0015 Papaver somniferum HOM05D004269 ORTHO05D007106 2.7e-192 675.6 445 78.9
HanXRQChr14g0453741 Helianthus annuus HOM05D004269 ORTHO05D007106 4.5e-192 674.9 472 74.6
MELO3C009277.2 Cucumis melo HOM05D004269 ORTHO05D007106 1.0e-191 673.7 461 75.7
Cfa017428 Carpinus fangiana HOM05D004269 ORTHO05D007106 2.9e-191 672.2 472 75.6
CsaV3_3G035070 Cucumis sativus L. HOM05D004269 ORTHO05D007106 8.6e-191 670.6 461 75.3
FAN14G0717 Fragaria x ananassa HOM05D004269 ORTHO05D007106 8.6e-191 670.6 441 79.4
Sed0027746 Sechium edule HOM05D004269 ORTHO05D007106 8.6e-191 670.6 461 76.8
Cpa.g.sc11.168 Carica papaya HOM05D004269 ORTHO05D007106 1.5e-190 669.8 441 78.0
PSO339G5566 Papaver somniferum HOM05D004269 ORTHO05D007106 2.5e-190 669.1 471 75.2
ClCG10G020940 Citrullus lanatus HOM05D004269 ORTHO05D007106 7.2e-190 667.5 461 76.1
TPR.G11806 Trifolium pratense HOM05D004269 ORTHO05D007106 9.5e-190 667.2 422 85.3
CiPaw.09G188900 Carya illinoinensis HOM05D004269 ORTHO05D007106 1.2e-189 666.8 470 75.3
PGSC0003DMG400008852 Solanum tuberosum HOM05D004269 ORTHO05D007106 1.2e-189 666.8 447 77.6
THA.LOC104815237 Tarenaya hassleriana HOM05D004269 ORTHO05D007106 1.2e-189 666.8 449 76.8
Solyc09g010420.4 Solanum lycopersicum HOM05D004269 ORTHO05D007106 1.6e-189 666.4 447 77.9
ECA238G4253 Erigeron canadensis HOM05D004269 ORTHO05D007106 2.8e-189 665.6 447 77.4
Haze_20743 Corylus avellana HOM05D004269 ORTHO05D007106 4.7e-189 664.8 486 73.3
Sabra12G0084000 Salix brachista HOM05D004269 ORTHO05D007106 6.1e-189 664.5 509 71.7
Sopen09g005160 Solanum pennellii HOM05D004269 ORTHO05D007106 8.0e-189 664.1 425 80.9
Aqoxy2G02034 Aquilegia oxysepala HOM05D004269 ORTHO05D007106 2.3e-188 662.5 441 77.8
MBI14_g24308_MAGBIO Magnolia biondii HOM05D004269 ORTHO05D007106 2.3e-188 662.5 448 76.8
Peaxi162Scf00039g01234 Petunia axillaris HOM05D004269 ORTHO05D007106 5.2e-188 661.4 430 80.0
PGR044G1633 Punica granatum HOM05D004269 ORTHO05D007106 1.2e-187 660.2 449 76.2
Hund02377 Selenicereus undatus HOM05D004269 ORTHO05D007106 3.4e-187 658.7 453 75.7
MSTRG.19100 Avicennia marina HOM05D004269 ORTHO05D007106 4.4e-187 658.3 425 80.2
BraA05t19815Z Brassica rapa HOM05D004269 ORTHO05D007106 5.7e-187 657.9 470 74.9
Carub.0004s1942 Capsella rubella HOM05D004269 ORTHO05D007106 9.8e-187 657.1 470 74.9
A05p08460 Brassica napus HOM05D004269 ORTHO05D007106 1.7e-186 656.4 470 74.5
AL4G33990 Arabidopsis lyrata HOM05D004269 ORTHO05D007106 2.2e-186 656.0 470 74.7
CARHR132110 Cardamine hirsuta HOM05D004269 ORTHO05D007106 2.2e-186 656.0 471 73.9
BolC4t28100H Brassica oleracea HOM05D004269 ORTHO05D007106 4.9e-186 654.8 470 74.5
BcaB02g09282 Brassica carinata HOM05D004269 ORTHO05D007106 6.3e-186 654.4 466 74.7
BcaC02g11857 Brassica carinata HOM05D004269 ORTHO05D007106 6.3e-186 654.4 470 74.0
Thecc.05G044300 Theobroma cacao HOM05D004269 ORTHO05D007106 8.3e-186 654.1 472 73.5
BraA04t18341Z Brassica rapa HOM05D004269 ORTHO05D007106 2.4e-185 652.5 470 74.3
Aa31LG5G19670 Aethionema arabicum HOM05D004269 ORTHO05D007106 3.2e-185 652.1 450 75.6
A04p28640 Brassica napus HOM05D004269 ORTHO05D007106 7.0e-185 651.0 470 74.3
AUR62036580 Chenopodium quinoa HOM05D004269 ORTHO05D007106 9.2e-185 650.6 424 79.0
Cc06_g02960 Coffea canephora HOM05D004269 ORTHO05D007106 1.2e-184 650.2 470 74.0
AUR62031166 Chenopodium quinoa HOM05D004269 ORTHO05D007106 1.6e-184 649.8 425 78.8
C04p10550 Brassica napus HOM05D004269 ORTHO05D007106 2.7e-184 649.0 470 73.8
Gohir.D09G153600 Gossypium hirsutum HOM05D004269 ORTHO05D007106 2.7e-184 649.0 474 73.0
BcaB06g28999 Brassica carinata HOM05D004269 ORTHO05D007106 3.5e-184 648.7 471 73.7
DCAR_009253 Daucus carota HOM05D004269 ORTHO05D007106 4.6e-184 648.3 453 75.3
Lsat_1_v5_gn_2_110500 Lactuca sativa HOM05D004269 ORTHO05D007106 4.6e-184 648.3 469 72.9
Thhalv10016608m.g Eutrema salsugineum HOM05D004269 ORTHO05D007106 7.8e-184 647.5 470 74.3
BolC4t22646H Brassica oleracea HOM05D004269 ORTHO05D007106 1.0e-183 647.1 465 74.2
Gorai.006G175100 Gossypium raimondii HOM05D004269 ORTHO05D007106 1.0e-183 647.1 474 72.4
Gohir.A09G158200 Gossypium hirsutum HOM05D004269 ORTHO05D007106 1.7e-183 646.4 474 72.4
Sp4g19820 Schrenkiella parvula HOM05D004269 ORTHO05D007106 1.7e-183 646.4 469 73.8
CDE05G0081 Ceratophyllum demersum HOM05D004269 ORTHO05D007106 1.5e-182 643.3 431 76.1
C04p65960 Brassica napus HOM05D004269 ORTHO05D007106 8.0e-181 637.5 496 70.4
EL10Ac8g18791 Beta vulgaris HOM05D004269 ORTHO05D007106 2.6e-179 632.5 449 73.3
CAN.G97.19 Capsicum annuum HOM05D004269 ORTHO05D007106 2.6e-179 632.5 433 76.2
Nn2g10437 Nelumbo nucifera HOM05D004269 ORTHO05D007106 2.2e-178 629.4 423 79.0
Nitab4.5_0002077g0090 Nicotiana tabacum HOM05D004269 ORTHO05D007106 3.7e-178 628.6 409 80.0
ATR0559G147 Amborella trichopoda HOM05D004269 ORTHO05D007106 6.4e-178 627.9 425 76.2
Manes.09G086800 Manihot esculenta HOM05D004269 ORTHO05D007106 6.4e-178 627.9 399 82.2
vmacro08669 Vaccinium macrocarpon HOM05D004269 ORTHO05D007106 5.4e-177 624.8 457 73.1
AT2G37500 Arabidopsis thaliana HOM05D004269 ORTHO05D007106 2.3e-175 619.4 406 79.6
Duzib128G0641 Durio zibethinus HOM05D004269 ORTHO05D007106 4.3e-174 615.1 478 69.5
Os03g0279400 Oryza sativa ssp. japonica HOM05D004269 ORTHO05D007106 1.2e-173 613.6 464 69.6
SGA_v2.0_scaffold75G24934 Striga asiatica HOM05D004269 ORTHO05D007106 6.2e-173 611.3 483 68.7
Migut.J00361 Erythranthe guttata HOM05D004269 ORTHO05D007106 5.8e-171 604.7 433 73.7
SalBow3G0454 Salvia bowleyana HOM05D004269 ORTHO05D007106 4.9e-170 601.7 513 65.7
Mapoly0082s0028 Marchantia polymorpha HOM05D004269 ORTHO05D007106 4.6e-168 595.1 449 69.7
Sc20g0004610 Simmondsia chinensis HOM05D004269 ORTHO05D007106 6.6e-167 591.3 397 78.6
TAR623G0301 Trochodendron aralioides HOM05D004269 ORTHO05D007106 5.2e-164 581.6 423 73.8
Pp3c9_2270 Physcomitrium patens HOM05D004269 ORTHO05D007106 2.6e-163 579.3 423 71.9
VMungo0720G1352 Vigna mungo HOM05D004269 ORTHO05D007106 1.0e-159 567.4 320 91.6
Nitab4.5_0009149g0030 Nicotiana tabacum HOM05D004269 ORTHO05D007106 5.6e-158 561.6 409 72.6
unitig_578.g15701 Utricularia gibba HOM05D004269 ORTHO05D007106 3.6e-157 558.9 430 68.4
TAR623G0331 Trochodendron aralioides HOM05D004269 ORTHO05D007106 9.9e-155 550.8 393 75.6
SMO347G0094 Selaginella moellendorffii HOM05D004269 ORTHO05D007106 3.8e-154 548.9 423 68.8
HPP92_001489 Vanilla planifolia HOM05D004269 ORTHO05D007106 7.1e-153 544.7 386 71.2
Dinv37204 Davidia involucrata HOM05D004269 ORTHO05D007106 2.4e-137 493.0 346 77.2
Actinidia05298 Actinidia chinensis HOM05D004269 ORTHO05D007106 6.7e-135 485.0 478 60.0
Cre16.g694850 Chlamydomonas reinhardtii HOM05D004269 ORTHO05D007106 8.7e-135 484.6 435 60.5
AagrBONN_evm.TU.Sc2ySwM_228.5429 Anthoceros agrestis HOM05D004269 ORTHO05D007106 1.6e-128 463.8 360 67.2
EL10Ac7g17097 Beta vulgaris HOM05D004269 ORTHO05D007106 6.0e-128 461.8 401 64.8
PRCOL_00001324 Prasinoderma coloniale HOM05D004269 ORTHO05D007106 6.9e-124 448.4 437 57.7
Zm00001eb012670 Zea mays HOM05D004269 ORTHO05D007106 7.6e-123 444.9 329 69.6
MCO14G482 Micromonas commoda HOM05D004269 ORTHO05D007106 3.7e-117 426.0 434 55.8
Hma1.2p1_1535F.1_g289500 Hydrangea macrophylla HOM05D004269 ORTHO05D007106 1.3e-106 391.0 253 81.8
SHI29092 Sapria himalayana HOM05D004269 ORTHO05D007106 4.7e-104 382.5 388 57.2
Actinidia13128 Actinidia chinensis HOM05D004269 ORTHO05D007106 6.5e-82 308.9 241 69.3
Rhsim04G0153900 Rhododendron simsii HOM05D004269 ORTHO05D007106 4.0e-79 299.7 201 79.1
Actinidia13127 Actinidia chinensis HOM05D004269 ORTHO05D007106 1.4e-76 291.2 202 75.2
Hma1.2p1_1535F.1_g289480 Hydrangea macrophylla HOM05D004269 ORTHO05D007106 1.8e-76 290.8 195 76.4
VMungo0720G1280 Vigna mungo HOM05D004269 ORTHO05D007106 7.0e-76 288.9 147 96.6
Hma1.2p1_1004F.1_g246860 Hydrangea macrophylla HOM05D004269 ORTHO05D007106 9.8e-70 268.5 204 69.1
CBR_g37471 Chara braunii HOM05D004269 ORTHO05D007106 2.8e-64 250.4 218 58.7
Hma1.2p1_1004F.1_g246850 Hydrangea macrophylla HOM05D004269 ORTHO05D007106 2.3e-63 247.3 182 75.3
Cfa024613 Carpinus fangiana HOM05D004269 ORTHO05D007106 2.7e-51 207.2 458 35.8
SEGI_16124 Sequoiadendron giganteum HOM05D004269 ORTHO05D007106 4.0e-47 193.4 124 75.8
SEGI_30751 Sequoiadendron giganteum HOM05D004269 ORTHO05D007106 3.2e-36 157.1 140 65.0
SEGI_32622 Sequoiadendron giganteum HOM05D004269 ORTHO05D007106 5.4e-36 156.4 137 65.7
Potri.015G112400 Populus trichocarpa HOM05D004269 ORTHO05D007106 7.3e-33 146.0 141 58.9
Lsat_1_v5_gn_4_171201 Lactuca sativa HOM05D004269 ORTHO05D000661 5.3e-31 139.8 264 37.9
Cc02_g24250 Coffea canephora HOM05D004269 ORTHO05D007106 1.5e-30 138.3 102 68.6
Lsat_1_v5_gn_7_20760 Lactuca sativa HOM05D004269 ORTHO05D020149 4.5e-30 136.7 158 55.7
QL09p013305 Quercus lobata HOM05D004269 ORTHO05D010618 4.5e-30 136.7 101 73.3
Lsat_1_v5_gn_6_110780 Lactuca sativa HOM05D004269 ORTHO05D000661 3.2e-28 130.6 264 36.0
SEGI_12229 Sequoiadendron giganteum HOM05D004269 ORTHO05D007106 7.9e-27 125.9 127 56.7
Cfa017427 Carpinus fangiana HOM05D004269 ORTHO05D021565 2.4e-23 114.4 106 57.5
Lsat_1_v5_gn_1_18180 Lactuca sativa HOM05D000819 ORTHO05D000661 3.0e-18 97.4 121 51.2
SalBow6G0271 Salvia bowleyana HOM05D004269 ORTHO05D000571 3.7e-16 90.5 87 52.9
Glyma.18G131800 Glycine max HOM05D004269 ORTHO05D213362 2.4e-15 87.8 73 64.4
Lsat_1_v5_gn_1_104560 Lactuca sativa HOM05D001098 ORTHO05D003515 1.0e-13 82.4 46 76.1
Lsat_1_v5_gn_9_124300 Lactuca sativa HOM05D001098 ORTHO05D003515 1.0e-13 82.4 46 76.1
C02p59220 Brassica napus HOM05D004269 ORTHO05D013520 3.8e-13 80.5 76 57.9
AUR62004247 Chenopodium quinoa HOM05D004269 ORTHO05D021565 8.4e-13 79.3 44 79.5
Sabra15G0134100 Salix brachista HOM05D004269 ORTHO05D007106 8.4e-13 79.3 90 54.4
ECA236G0058 Erigeron canadensis HOM05D000039 ORTHO05D000370 1.1e-12 79.0 64 67.2
AUR62035732 Chenopodium quinoa HOM05D004269 ORTHO05D021565 1.9e-12 78.2 72 52.8
BcaC06g34343 Brassica carinata HOM05D004269 ORTHO05D013520 3.2e-12 77.4 80 56.2
BcaC01g04800 Brassica carinata HOM05D004269 ORTHO05D013520 4.2e-12 77.0 133 43.6
C05p40550 Brassica napus HOM05D004269 ORTHO05D013520 9.3e-12 75.9 86 53.5
C01p38510 Brassica napus HOM05D004269 ORTHO05D013520 1.2e-11 75.5 108 48.1
C04p14230 Brassica napus HOM05D004269 ORTHO05D013520 1.2e-11 75.5 108 48.1
BolC5t30237H Brassica oleracea HOM05D004269 ORTHO05D013520 1.2e-11 75.5 108 48.1
BcaC05g28037 Brassica carinata HOM05D004269 ORTHO05D013520 2.1e-11 74.7 64 62.5
C02p38620 Brassica napus HOM05D004269 ORTHO05D013520 2.1e-11 74.7 64 62.5
C05p46330 Brassica napus HOM05D004269 ORTHO05D013520 2.1e-11 74.7 108 47.2
C07p30140 Brassica napus HOM05D004269 ORTHO05D013520 2.1e-11 74.7 64 62.5
BolC5t33714H Brassica oleracea HOM05D004269 ORTHO05D013520 2.1e-11 74.7 64 62.5
BolC5t33363H Brassica oleracea HOM05D004269 ORTHO05D013520 3.5e-11 73.9 64 62.5
BcaB08g34435 Brassica carinata HOM05D004269 ORTHO05D000659 1.0e-10 72.4 61 52.5
Lsat_1_v5_gn_3_125120 Lactuca sativa HOM05D004623 ORTHO05D005100 1.8e-10 71.6 177 31.6
Lsat_1_v5_gn_7_15681 Lactuca sativa HOM05D004269 ORTHO05D007106 3.0e-10 70.9 165 33.9
COL.COLO4_35964 Corchorus olitorius HOM05D001211 ORTHO05D001084 5.1e-10 70.1 76 52.6
BolC6t36588H Brassica oleracea HOM05D004269 ORTHO05D013520 2.5e-09 67.8 110 46.4
CARHR249580 Cardamine hirsuta HOM05D004269 ORTHO05D021565 8.2e-08 62.8 52 63.5
CAN.G1327.6 Capsicum annuum HOM05D004269 ORTHO05D007861 5.3e-07 60.1 48 66.7
BcaC07g37638 Brassica carinata HOM05D004269 ORTHO05D016737 6.9e-07 59.7 39 74.4
BcaC04g20716 Brassica carinata HOM05D004269 ORTHO05D013520 9.0e-07 59.3 43 69.8
BcaC07g37609 Brassica carinata HOM05D004269 ORTHO05D013520 3.4e-06 57.4 58 55.2


User provided reference genes

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