Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.13G130600 Glycine max HOM05D007427 ORTHO05D006413 5.9e-19 97.4 47 100.0
Glyma.10G043100 Glycine max HOM05D007427 ORTHO05D006413 4.2e-17 91.3 48 95.8
Phvul.007G156700 Phaseolus vulgaris HOM05D007427 ORTHO05D006413 1.7e-13 79.3 47 78.7
MD05G1181500 Malus domestica HOM05D007427 ORTHO05D006413 1.9e-09 65.9 52 71.2
Prupe.8G208000 Prunus persica HOM05D007427 ORTHO05D006413 2.5e-09 65.5 52 69.2
Glyma.19G171900 Glycine max HOM05D007427 ORTHO05D006413 3.3e-09 65.1 54 63.0
QL09p044390 Quercus lobata HOM05D007427 ORTHO05D006413 3.3e-09 65.1 52 61.5
Medtr7g099670 Medicago truncatula HOM05D007427 ORTHO05D006413 4.3e-09 64.7 51 66.7
Thecc.01G231600 Theobroma cacao HOM05D007427 ORTHO05D006413 4.3e-09 64.7 52 65.4
VMungo1383G3325 Vigna mungo HOM05D007427 ORTHO05D006413 4.3e-09 64.7 52 67.3
CiPaw.04G107800 Carya illinoinensis HOM05D007427 ORTHO05D006413 7.3e-09 63.9 50 62.0
Glyma.03G170900 Glycine max HOM05D007427 ORTHO05D006413 9.5e-09 63.5 54 64.8
Psat3g049800 Pisum sativum HOM05D007427 ORTHO05D006413 9.5e-09 63.5 52 67.3
Glyma.03G170800 Glycine max HOM05D007427 ORTHO05D006413 1.2e-08 63.2 54 63.0
Phvul.001G168900 Phaseolus vulgaris HOM05D007427 ORTHO05D006413 1.2e-08 63.2 52 65.4
Lj1g0018605 Lotus japonicus HOM05D007427 ORTHO05D006413 2.8e-08 62.0 52 59.6
Duzib138G0914 Durio zibethinus HOM05D007427 ORTHO05D006413 4.7e-08 61.2 53 67.9
Haze_24760 Corylus avellana HOM05D007427 ORTHO05D006413 1.0e-07 60.1 52 63.5
Lalb_Chr01g0019331 Lupinus albus HOM05D007427 ORTHO05D006413 1.0e-07 60.1 52 55.8
Duzib211G0080 Durio zibethinus HOM05D007427 ORTHO05D006413 1.4e-07 59.7 49 65.3
Lalb_Chr25g0289621 Lupinus albus HOM05D007427 ORTHO05D006413 1.4e-07 59.7 52 57.7
Ca_08774_v3 Cicer arietinum L. HOM05D007427 ORTHO05D006413 1.8e-07 59.3 52 57.7
COL.COLO4_28358 Corchorus olitorius HOM05D007427 ORTHO05D006413 2.3e-07 58.9 60 56.7
Duzib138G1712 Durio zibethinus HOM05D007427 ORTHO05D006413 2.3e-07 58.9 38 76.3
Psat6g064560 Pisum sativum HOM05D007427 ORTHO05D006413 2.3e-07 58.9 50 66.0
RcHm_v2.0_Chr6g0285411 Rosa chinensis HOM05D007427 ORTHO05D006413 3.0e-07 58.5 54 66.7
Medtr1g069085 Medicago truncatula HOM05D007427 ORTHO05D006413 4.0e-07 58.2 51 66.7
Ciclev10022773m.g Citrus clementina HOM05D007427 ORTHO05D006413 6.8e-07 57.4 70 50.0
CSS0029156 Camellia sinensis var. sinensis HOM05D007427 ORTHO05D006413 1.2e-06 56.6 57 57.9
CSS0036288 Camellia sinensis var. sinensis HOM05D007427 ORTHO05D006413 1.2e-06 56.6 57 57.9
QL09p044388 Quercus lobata HOM05D007427 ORTHO05D006413 1.5e-06 56.2 52 55.8
Dinv19234 Davidia involucrata HOM05D007427 ORTHO05D006413 2.0e-06 55.8 54 51.9
Lalb_Chr02g0152981 Lupinus albus HOM05D007427 ORTHO05D006413 2.6e-06 55.5 52 61.5
Actinidia23744 Actinidia chinensis HOM05D007427 ORTHO05D006413 4.4e-06 54.7 53 54.7
CiPaw.04G107700 Carya illinoinensis HOM05D007427 ORTHO05D006413 5.7e-06 54.3 54 50.0
Duzib138G0919 Durio zibethinus HOM05D007427 ORTHO05D006413 7.5e-06 53.9 76 46.1
Glyma.19G171800 Glycine max HOM05D007427 ORTHO05D006413 7.5e-06 53.9 54 50.0
Ciclev10022672m.g Citrus clementina HOM05D007427 ORTHO05D006413 9.8e-06 53.5 70 48.6
Hma1.2p1_1858F.1_g305540 Hydrangea macrophylla HOM05D007427 ORTHO05D006413 9.8e-06 53.5 54 48.1


User provided reference genes

Program Settings