Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.13G129600 Glycine max HOM05D014010 ORTHO05D010367 0.0e+00 1352.4 663 100.0
Phvul.007G155700 Phaseolus vulgaris HOM05D014010 ORTHO05D010367 2.1e-235 819.3 591 72.1
VMungo0720G0709 Vigna mungo HOM05D014010 ORTHO05D010367 1.4e-223 780.0 701 60.6
Lj5g0020428 Lotus japonicus HOM05D014010 ORTHO05D010367 2.7e-190 669.5 662 55.9
Ca_09627_v3 Cicer arietinum L. HOM05D014010 ORTHO05D010367 5.5e-183 645.2 732 50.8
TPR.G25869 Trifolium pratense HOM05D014010 ORTHO05D010367 4.6e-182 642.1 773 48.3
Medtr1g069195 Medicago truncatula HOM05D014010 ORTHO05D010367 9.1e-178 627.9 760 48.6
Psat6g065120 Pisum sativum HOM05D014010 ORTHO05D010367 1.8e-170 603.6 733 49.1
arahy.Tifrunner.gnm1.ann1.201IN6 Arachis hypogaea HOM05D014010 ORTHO05D010367 1.3e-115 421.4 785 38.6
Lalb_Chr02g0152931 Lupinus albus HOM05D014010 ORTHO05D010367 3.0e-104 383.6 529 46.5
arahy.Tifrunner.gnm1.ann1.S5Q210 Arachis hypogaea HOM05D014010 ORTHO05D010367 5.3e-85 319.7 606 37.5
Cfa002512 Carpinus fangiana HOM05D009210 ORTHO05D010367 4.5e-28 130.6 588 26.7
Gohir.A07G202550 Gossypium hirsutum HOM05D009210 ORTHO05D010367 3.0e-19 101.3 308 29.2
QL07p009176 Quercus lobata HOM05D009210 ORTHO05D010367 6.6e-19 100.1 250 31.2
QL09p043508 Quercus lobata HOM05D009210 ORTHO05D010367 6.6e-19 100.1 250 31.2
Gohir.D07G208750 Gossypium hirsutum HOM05D009210 ORTHO05D010367 1.9e-18 98.6 309 29.8
QL09p043802 Quercus lobata HOM05D009210 ORTHO05D010367 2.5e-18 98.2 239 31.8
Gorai.001G235700 Gossypium raimondii HOM05D009210 ORTHO05D010367 7.3e-18 96.7 309 29.4
Haze_24738 Corylus avellana HOM05D009210 ORTHO05D010367 4.7e-17 94.0 288 28.8
QL09p043653 Quercus lobata HOM05D009210 ORTHO05D010367 3.1e-16 91.3 226 32.3
Manes.13G042500 Manihot esculenta HOM05D009210 ORTHO05D010367 6.8e-16 90.1 662 23.7
CiPaw.04G192300 Carya illinoinensis HOM05D009210 ORTHO05D010367 4.4e-15 87.4 135 40.0
TWI59G1397 Tripterygium wilfordii HOM05D009210 ORTHO05D010367 1.3e-14 85.9 220 30.9
CANSAT01G1047 Cannabis sativa HOM05D009210 ORTHO05D010367 1.9e-13 82.0 221 33.0
Prupe.8G209900 Prunus persica HOM05D016859 ORTHO05D010367 2.1e-12 78.6 197 36.0
Actinidia30107 Actinidia chinensis HOM05D009210 ORTHO05D010367 1.0e-11 76.3 237 29.5
Ciclev10019870m.g Citrus clementina HOM05D009210 ORTHO05D010367 3.0e-11 74.7 142 33.1
Hund18342 Selenicereus undatus HOM05D017699 ORTHO05D019543 7.3e-10 70.1 201 30.3
CsaV3_7G025420 Cucumis sativus L. HOM05D026148 ORTHO05D010367 3.6e-09 67.8 407 25.8
Oeu052100.2 Olea europaea HOM05D013334 ORTHO05D015998 4.7e-09 67.4 209 31.6
Atru.chr5.1921 Acer truncatum HOM05D009210 ORTHO05D010367 8.1e-09 66.6 168 34.5
Nitab4.5_0002330g0020 Nicotiana tabacum HOM05D013334 ORTHO05D015998 8.1e-09 66.6 222 31.5
MELO3C024146.2 Cucumis melo HOM05D026148 ORTHO05D010367 3.1e-08 64.7 416 25.7
FvH4_2g19950 Fragaria vesca HOM05D016859 ORTHO05D010367 2.0e-07 62.0 276 29.3
Nn3g19852 Nelumbo nucifera HOM05D009210 ORTHO05D010367 3.4e-07 61.2 685 23.6
ClCG09G009440 Citrullus lanatus HOM05D026148 ORTHO05D010367 4.4e-07 60.8 358 26.0
Dinv19248 Davidia involucrata HOM05D009210 ORTHO05D010367 4.4e-07 60.8 250 24.8
THA.LOC104814711 Tarenaya hassleriana HOM05D012015 ORTHO05D014750 4.4e-07 60.8 262 28.2
Duzib211G0683 Durio zibethinus HOM05D009210 ORTHO05D010367 5.8e-07 60.5 678 23.5
FAN24G1655 Fragaria x ananassa HOM05D016859 ORTHO05D010367 7.5e-07 60.1 279 28.3
Lj1A79G19 Lonicera japonica HOM05D009210 ORTHO05D010367 3.7e-06 57.8 302 25.5
DCAR_000542 Daucus carota HOM05D009210 ORTHO05D010367 6.4e-06 57.0 236 27.5


User provided reference genes

Program Settings