Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.13G127200 Glycine max HOM05D006027 ORTHO05D007604 1.5e-121 439.5 222 100.0
Glyma.10G040600 Glycine max HOM05D006027 ORTHO05D007604 2.5e-92 342.4 180 95.6
Phvul.007G153500 Phaseolus vulgaris HOM05D006027 ORTHO05D007604 2.7e-86 322.4 180 90.0
VMungo0720G1620 Vigna mungo HOM05D006027 ORTHO05D007604 5.1e-85 318.2 180 88.3
Lj5g0017558 Lotus japonicus HOM05D006027 ORTHO05D007604 2.0e-81 306.2 180 85.6
TPR.G5919 Trifolium pratense HOM05D006027 ORTHO05D007604 1.4e-77 293.5 187 82.4
Medtr1g069465 Medicago truncatula HOM05D006027 ORTHO05D007604 5.2e-77 291.6 181 81.8
Lalb_Chr02g0152741 Lupinus albus HOM05D006027 ORTHO05D007604 8.8e-77 290.8 190 79.5
Ca_09646_v3 Cicer arietinum L. HOM05D006027 ORTHO05D007604 3.3e-76 288.9 180 82.8
Lalb_Chr06g0170731 Lupinus albus HOM05D006027 ORTHO05D007604 6.3e-75 284.6 180 80.0
Psat6g062520 Pisum sativum HOM05D006027 ORTHO05D007604 1.8e-74 283.1 182 81.3
arahy.Tifrunner.gnm1.ann1.72UZ71 Arachis hypogaea HOM05D006027 ORTHO05D007604 9.1e-74 280.8 180 80.0
arahy.Tifrunner.gnm1.ann1.FRV526 Arachis hypogaea HOM05D006027 ORTHO05D007604 9.1e-74 280.8 180 80.0
QL09p041558 Quercus lobata HOM05D006027 ORTHO05D007604 6.5e-72 274.6 181 79.0
Manes.12G038000 Manihot esculenta HOM05D006027 ORTHO05D007604 2.7e-70 269.2 197 74.1
Gohir.A07G152700 Gossypium hirsutum HOM05D006027 ORTHO05D007604 3.0e-69 265.8 182 75.3
Phvul.001G165200 Phaseolus vulgaris HOM05D006027 ORTHO05D007604 3.0e-69 265.8 179 75.4
Gorai.001G182100 Gossypium raimondii HOM05D006027 ORTHO05D007604 6.8e-69 264.6 182 74.7
Gohir.D07G158900 Gossypium hirsutum HOM05D006027 ORTHO05D007604 1.2e-68 263.8 182 74.7
Duzib138G0534 Durio zibethinus HOM05D006027 ORTHO05D007604 2.0e-68 263.1 183 75.4
VMungo1383G1953 Vigna mungo HOM05D006027 ORTHO05D007604 2.0e-68 263.1 180 75.0
Thecc.01G249800 Theobroma cacao HOM05D006027 ORTHO05D007604 5.7e-68 261.5 182 75.3
CANSAT01G0515 Cannabis sativa HOM05D006027 ORTHO05D007604 9.8e-68 260.8 183 76.5
Duzib211G0648 Durio zibethinus HOM05D006027 ORTHO05D007604 2.8e-67 259.2 182 75.3
Haze_24710 Corylus avellana HOM05D006027 ORTHO05D007604 4.8e-67 258.5 186 73.1
CANSAT01G2333 Cannabis sativa HOM05D006027 ORTHO05D007604 8.3e-67 257.7 183 76.5
Atru.chr5.1865 Acer truncatum HOM05D006027 ORTHO05D007604 2.4e-66 256.1 181 72.9
Sopen09g025650 Solanum pennellii HOM05D006027 ORTHO05D007604 4.1e-66 255.4 181 74.0
Manes.13G039500 Manihot esculenta HOM05D006027 ORTHO05D007604 7.0e-66 254.6 184 75.0
GSVIVG01028434001 Vitis vinifera HOM05D006027 ORTHO05D007604 7.0e-66 254.6 180 71.7
Nitab4.5_0000845g0140 Nicotiana tabacum HOM05D006027 ORTHO05D007604 1.2e-65 253.8 194 71.1
Prupe.8G215000 Prunus persica HOM05D006027 ORTHO05D007604 1.2e-65 253.8 181 72.9
Solyc09g064500.3 Solanum lycopersicum HOM05D006027 ORTHO05D007604 1.2e-65 253.8 181 73.5
PGSC0003DMG400008585 Solanum tuberosum HOM05D006027 ORTHO05D007604 1.6e-65 253.4 181 73.5
Potri.002G256400 Populus trichocarpa HOM05D006027 ORTHO05D007604 2.7e-65 252.7 182 72.5
Eucgr.K01424 Eucalyptus grandis HOM05D006027 ORTHO05D007604 7.7e-65 251.1 182 72.5
Nitab4.5_0002435g0010 Nicotiana tabacum HOM05D006027 ORTHO05D007604 7.7e-65 251.1 181 72.4
Dinv43066 Davidia involucrata HOM05D006027 ORTHO05D007604 1.3e-64 250.4 181 72.4
PGR044G2038 Punica granatum HOM05D006027 ORTHO05D007604 1.7e-64 250.0 184 71.7
Nn3g19801 Nelumbo nucifera HOM05D006027 ORTHO05D007604 2.2e-64 249.6 185 73.0
Sabra02G0194900 Salix brachista HOM05D006027 ORTHO05D007604 6.5e-64 248.1 182 70.3
Aqoxy5G00130 Aquilegia oxysepala HOM05D006027 ORTHO05D007604 8.5e-64 247.7 184 69.6
CAN.G536.12 Capsicum annuum HOM05D006027 ORTHO05D007604 1.5e-63 246.9 181 71.8
Migut.D00479 Erythranthe guttata HOM05D006027 ORTHO05D007604 7.2e-63 244.6 183 69.9
TAR633G0397 Trochodendron aralioides HOM05D006027 ORTHO05D007604 7.2e-63 244.6 183 71.0
PSO764G0320 Papaver somniferum HOM05D006027 ORTHO05D007604 9.5e-63 244.2 185 70.8
MD05G1188500 Malus domestica HOM05D006027 ORTHO05D007604 1.2e-62 243.8 181 71.3
DCAR_000568 Daucus carota HOM05D006027 ORTHO05D007604 8.0e-62 241.1 181 69.6
Cfa002488 Carpinus fangiana HOM05D006027 ORTHO05D007604 1.4e-61 240.4 169 73.4
PSO832G0858 Papaver somniferum HOM05D006027 ORTHO05D007604 1.4e-61 240.4 184 70.1
Actinidia23700 Actinidia chinensis HOM05D006027 ORTHO05D007604 2.3e-61 239.6 198 68.2
SGA_v2.0_scaffold1G00660 Striga asiatica HOM05D006027 ORTHO05D007604 4.0e-61 238.8 186 68.3
FAN27G2528 Fragaria x ananassa HOM05D006027 ORTHO05D007604 6.8e-61 238.0 182 70.3
Lj1C74G4 Lonicera japonica HOM05D006027 ORTHO05D007604 6.8e-61 238.0 152 78.9
MD10G1176000 Malus domestica HOM05D006027 ORTHO05D007604 6.8e-61 238.0 181 70.2
FAN15G2830 Fragaria x ananassa HOM05D006027 ORTHO05D007604 1.2e-60 237.3 182 69.8
vmacro14793 Vaccinium macrocarpon HOM05D006027 ORTHO05D007604 1.5e-60 236.9 184 67.9
Actinidia09513 Actinidia chinensis HOM05D006027 ORTHO05D007604 3.4e-60 235.7 184 69.0
ClCG06G001400 Citrullus lanatus HOM05D006027 ORTHO05D007604 3.4e-60 235.7 186 68.8
MELO3C022393.2 Cucumis melo HOM05D006027 ORTHO05D007604 5.7e-60 235.0 184 69.0
CSS0012566 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 9.8e-60 234.2 180 67.8
Os01g0938100 Oryza sativa ssp. japonica HOM05D006027 ORTHO05D007604 9.8e-60 234.2 179 68.2
Cc01_g17770 Coffea canephora HOM05D006027 ORTHO05D007604 1.7e-59 233.4 181 68.5
FvH4_2g20470 Fragaria vesca HOM05D006027 ORTHO05D007604 1.7e-59 233.4 182 68.7
FAN24G3422 Fragaria x ananassa HOM05D006027 ORTHO05D007604 1.7e-59 233.4 182 68.7
Oeu052083.1 Olea europaea HOM05D006027 ORTHO05D007604 2.2e-59 233.0 145 80.7
TWI18G0031 Tripterygium wilfordii HOM05D006027 ORTHO05D007604 2.2e-59 233.0 181 64.6
Lsat_1_v5_gn_5_181161 Lactuca sativa HOM05D006027 ORTHO05D007604 3.7e-59 232.3 182 67.6
Oeu015437.1 Olea europaea HOM05D006027 ORTHO05D007604 4.9e-59 231.9 151 78.1
Rhsim01G0260300 Rhododendron simsii HOM05D006027 ORTHO05D007604 6.3e-59 231.5 151 75.5
CSS0010160 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 8.3e-59 231.1 180 66.7
TAR362G0914 Trochodendron aralioides HOM05D006027 ORTHO05D007604 1.1e-58 230.7 184 66.3
MBI07_g08912_MAGBIO Magnolia biondii HOM05D006027 ORTHO05D007604 3.1e-58 229.2 182 66.5
HanXRQChr01g0014971 Helianthus annuus HOM05D006027 ORTHO05D007604 4.1e-58 228.8 183 67.2
Ciclev10022322m.g Citrus clementina HOM05D006027 ORTHO05D007604 5.9e-57 224.9 171 66.7
CDE02G4364 Ceratophyllum demersum HOM05D006027 ORTHO05D007604 3.8e-56 222.2 184 65.2
Zm00001eb141830 Zea mays HOM05D006027 ORTHO05D007604 9.5e-55 217.6 154 72.7
AUR62025437 Chenopodium quinoa HOM05D006027 ORTHO05D007604 1.2e-54 217.2 184 64.1
HPP92_027289 Vanilla planifolia HOM05D006027 ORTHO05D007604 2.1e-54 216.5 153 69.3
ECA248G3782 Erigeron canadensis HOM05D006027 ORTHO05D007604 2.8e-54 216.1 155 70.3
EL10Ac7g17691 Beta vulgaris HOM05D006027 ORTHO05D007604 3.6e-54 215.7 154 69.5
BraA01t00872Z Brassica rapa HOM05D006027 ORTHO05D007604 6.1e-54 214.9 159 65.4
Hund18287 Selenicereus undatus HOM05D006027 ORTHO05D007604 6.1e-54 214.9 182 62.6
A03p58340 Brassica napus HOM05D006027 ORTHO05D007604 8.0e-54 214.5 184 59.8
BcaC06g32609 Brassica carinata HOM05D006027 ORTHO05D007604 1.0e-53 214.2 154 68.2
Peaxi162Scf00043g00255 Petunia axillaris HOM05D006027 ORTHO05D007604 1.8e-53 213.4 116 87.1
Sed0007731 Sechium edule HOM05D006027 ORTHO05D007604 1.8e-53 213.4 167 65.3
unitig_8.g3074 Utricularia gibba HOM05D006027 ORTHO05D007604 1.8e-53 213.4 186 60.8
COL.COLO4_10205 Corchorus olitorius HOM05D006027 ORTHO05D007604 2.3e-53 213.0 114 89.5
C01p10860 Brassica napus HOM05D006027 ORTHO05D007604 3.0e-53 212.6 183 58.5
HPP92_008468 Vanilla planifolia HOM05D006027 ORTHO05D007604 4.0e-53 212.2 183 61.2
Cpa.g.sc87.33 Carica papaya HOM05D006027 ORTHO05D007604 6.8e-53 211.5 115 88.7
A01p09280 Brassica napus HOM05D006027 ORTHO05D007604 8.9e-53 211.1 183 57.4
THA.LOC104814531 Tarenaya hassleriana HOM05D006027 ORTHO05D007604 1.2e-52 210.7 182 61.0
BcaNung04696 Brassica carinata HOM05D006027 ORTHO05D007604 2.6e-52 209.5 197 56.9
Sp7g26630 Schrenkiella parvula HOM05D006027 ORTHO05D007604 5.7e-52 208.4 182 61.5
Zm00001eb141870 Zea mays HOM05D006027 ORTHO05D007604 7.5e-52 208.0 180 62.8
CARHR236440 Cardamine hirsuta HOM05D006027 ORTHO05D007604 9.8e-52 207.6 175 61.7
SalBow4G0311 Salvia bowleyana HOM05D006027 ORTHO05D007604 9.8e-52 207.6 116 85.3
BolC7t46115H Brassica oleracea HOM05D006027 ORTHO05D007604 1.3e-51 207.2 187 57.8
C07p56360 Brassica napus HOM05D006027 ORTHO05D007604 2.9e-51 206.1 187 57.2
Aa31LG2G21720 Aethionema arabicum HOM05D006027 ORTHO05D007604 3.7e-51 205.7 183 60.7
AUR62008802 Chenopodium quinoa HOM05D006027 ORTHO05D007604 1.4e-50 203.8 118 80.5
AT4G28660 Arabidopsis thaliana HOM05D006027 ORTHO05D007604 1.8e-50 203.4 182 59.9
THA.LOC104820068 Tarenaya hassleriana HOM05D006027 ORTHO05D007604 2.4e-50 203.0 185 62.2
BolC1t01050H Brassica oleracea HOM05D000022 ORTHO05D000744 7.0e-50 201.4 176 58.5
Carub.0007s1200 Capsella rubella HOM05D006027 ORTHO05D007604 7.0e-50 201.4 185 60.0
Thhalv10026347m.g Eutrema salsugineum HOM05D006027 ORTHO05D007604 2.0e-49 199.9 182 59.3
AL7G23880 Arabidopsis lyrata HOM05D006027 ORTHO05D007604 3.5e-49 199.1 185 60.0
ATR0787G157 Amborella trichopoda HOM05D006027 ORTHO05D007604 4.6e-49 198.7 115 80.9
Sc05g0002880 Simmondsia chinensis HOM05D006027 ORTHO05D007604 4.6e-49 198.7 173 64.2
CiPaw.03G271300 Carya illinoinensis HOM05D006027 ORTHO05D007604 1.7e-48 196.8 181 62.4
Mapoly0042s0085 Marchantia polymorpha HOM05D006027 ORTHO05D007604 8.3e-43 177.9 222 49.5
Pp3c7_5450 Physcomitrium patens HOM05D006027 ORTHO05D007604 7.0e-42 174.9 118 68.6
SMO347G0509 Selaginella moellendorffii HOM05D006027 ORTHO05D007604 2.7e-41 172.9 115 72.2
AagrBONN_evm.TU.Sc2ySwM_340.224 Anthoceros agrestis HOM05D006027 ORTHO05D007604 1.0e-40 171.0 108 72.2
Pp3c11_18280 Physcomitrium patens HOM05D006027 ORTHO05D007604 8.6e-40 167.9 116 66.4
CBR_g12742 Chara braunii HOM05D006027 ORTHO05D007604 2.0e-36 156.8 110 63.6
Cre10.g440450 Chlamydomonas reinhardtii HOM05D006027 ORTHO05D007604 1.6e-33 147.1 108 61.1
Ah.15g092630 Amaranthus hybridus HOM05D006027 ORTHO05D007604 2.1e-33 146.7 111 64.9
PRCOL_00005949 Prasinoderma coloniale HOM05D006027 ORTHO05D007604 2.7e-33 146.4 106 61.3
MCO16G336 Micromonas commoda HOM05D006027 ORTHO05D007604 3.0e-32 142.9 109 58.7
CSS0017427 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 1.4e-26 124.0 171 48.5
Zm00001eb141750 Zea mays HOM05D006027 ORTHO05D007604 1.2e-22 110.9 59 88.1
Zm00001eb141790 Zea mays HOM05D006027 ORTHO05D007604 1.2e-22 110.9 59 88.1
RcHm_v2.0_Chr6g0286561 Rosa chinensis HOM05D006027 ORTHO05D007604 2.9e-19 99.8 102 58.8
TAR362G0025 Trochodendron aralioides HOM05D006027 ORTHO05D007604 1.9e-18 97.1 66 71.2
Zm00001eb141760 Zea mays HOM05D006027 ORTHO05D007604 8.7e-16 88.2 52 78.8
CDE09G0356 Ceratophyllum demersum HOM05D006027 ORTHO05D007604 8.1e-14 81.6 110 48.2


User provided reference genes

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