Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.13G105501 Glycine max HOM05D001412 ORTHO05D021557 1.9e-75 285.8 146 100.0
Glyma.17G053900 Glycine max HOM05D001412 ORTHO05D002473 1.5e-48 196.4 119 88.2
Lj4g0010593 Lotus japonicus HOM05D001412 ORTHO05D002473 3.5e-42 175.3 109 83.5
Phvul.003G135600 Phaseolus vulgaris HOM05D001412 ORTHO05D002473 6.7e-41 171.0 109 81.7
arahy.Tifrunner.gnm1.ann1.HY2LYN Arachis hypogaea HOM05D001412 ORTHO05D002473 8.2e-39 164.1 110 77.3
arahy.Tifrunner.gnm1.ann1.Y11TJZ Arachis hypogaea HOM05D001412 ORTHO05D002473 8.2e-39 164.1 110 77.3
Lalb_Chr07g0180891 Lupinus albus HOM05D001412 ORTHO05D002473 8.2e-39 164.1 109 77.1
Medtr4g126040 Medicago truncatula HOM05D001412 ORTHO05D002473 1.7e-36 156.4 109 77.1
TPR.G9470 Trifolium pratense HOM05D001412 ORTHO05D002473 5.0e-36 154.8 109 75.2
VMungo1215G0238 Vigna mungo HOM05D001412 ORTHO05D002473 5.0e-36 154.8 89 89.9
Dinv36777 Davidia involucrata HOM05D001412 ORTHO05D002473 1.1e-35 153.7 110 72.7
Dinv42330 Davidia involucrata HOM05D001412 ORTHO05D002473 1.6e-34 149.8 110 72.7
Medtr2g039670 Medicago truncatula HOM05D001412 ORTHO05D002473 2.7e-34 149.1 115 72.2
Lalb_Chr08g0232301 Lupinus albus HOM05D001412 ORTHO05D002473 4.6e-34 148.3 105 74.3
TAR622G0136 Trochodendron aralioides HOM05D005263 ORTHO05D006891 4.6e-34 148.3 110 71.8
GSVIVG01015188001 Vitis vinifera HOM05D001412 ORTHO05D002473 4.6e-34 148.3 110 71.8
Hma1.2p1_0672F.1_g201100 Hydrangea macrophylla HOM05D001412 ORTHO05D002473 7.9e-34 147.5 112 71.4
arahy.Tifrunner.gnm1.ann1.D3QW6U Arachis hypogaea HOM05D001412 ORTHO05D002473 1.0e-33 147.1 123 67.5
CSS0042918 Camellia sinensis var. sinensis HOM05D001412 ORTHO05D002473 1.0e-33 147.1 109 68.8
Lj6g0021045 Lotus japonicus HOM05D001412 ORTHO05D002473 1.0e-33 147.1 118 71.2
arahy.Tifrunner.gnm1.ann1.K2HVP1 Arachis hypogaea HOM05D001412 ORTHO05D002473 2.3e-33 146.0 123 66.7
Ca_02171_v3 Cicer arietinum L. HOM05D001412 ORTHO05D002473 3.0e-33 145.6 117 71.8
Thecc.09G087100 Theobroma cacao HOM05D001412 ORTHO05D002473 5.1e-33 144.8 110 70.9
MD15G1209000 Malus domestica HOM05D001412 ORTHO05D002473 1.5e-32 143.3 110 69.1
Actinidia38452 Actinidia chinensis HOM05D001412 ORTHO05D002473 1.9e-32 142.9 110 68.2
Psat1g140080 Pisum sativum HOM05D001412 ORTHO05D002473 1.9e-32 142.9 117 70.9
TPR.G13421 Trifolium pratense HOM05D001412 ORTHO05D002473 2.5e-32 142.5 117 69.2
Potri.006G148700 Populus trichocarpa HOM05D001412 ORTHO05D002473 3.3e-32 142.1 110 67.3
AUR62029049 Chenopodium quinoa HOM05D001412 ORTHO05D002473 1.3e-31 140.2 111 66.7
TWI63G0787 Tripterygium wilfordii HOM05D001412 ORTHO05D002473 1.3e-31 140.2 110 63.6
Prupe.7G207400 Prunus persica HOM05D001412 ORTHO05D002473 1.7e-31 139.8 110 67.3
Gohir.D13G198400 Gossypium hirsutum HOM05D001412 ORTHO05D002473 2.2e-31 139.4 110 69.1
Gorai.013G227300 Gossypium raimondii HOM05D001412 ORTHO05D002473 2.2e-31 139.4 110 69.1
Ah.14g085150 Amaranthus hybridus HOM05D001412 ORTHO05D002473 2.8e-31 139.0 110 68.2
Cfa003069 Carpinus fangiana HOM05D001412 ORTHO05D002473 2.8e-31 139.0 110 67.3
Glyma.15G170600 Glycine max HOM05D001412 ORTHO05D002473 2.8e-31 139.0 116 67.2
Nn3g16219 Nelumbo nucifera HOM05D001412 ORTHO05D002473 3.7e-31 138.7 112 66.1
Glyma.09G064300 Glycine max HOM05D001412 ORTHO05D002473 4.8e-31 138.3 89 77.5
Gohir.A13G193100 Gossypium hirsutum HOM05D001412 ORTHO05D002473 6.3e-31 137.9 110 68.2
Sabra06G0117600 Salix brachista HOM05D001412 ORTHO05D002473 6.3e-31 137.9 110 66.4
MD02G1081700 Malus domestica HOM05D001412 ORTHO05D002473 8.2e-31 137.5 110 67.3
Phvul.009G231500 Phaseolus vulgaris HOM05D001412 ORTHO05D002473 8.2e-31 137.5 89 78.7
Sc14g0000710 Simmondsia chinensis HOM05D001412 ORTHO05D002473 1.4e-30 136.7 110 68.2
Lj4A294T56 Lonicera japonica HOM05D001412 ORTHO05D002473 1.8e-30 136.3 111 67.6
Manes.16G100900 Manihot esculenta HOM05D001412 ORTHO05D002473 1.8e-30 136.3 110 67.3
Rhsim03G0231500 Rhododendron simsii HOM05D001412 ORTHO05D002473 1.8e-30 136.3 110 67.3
VMungo1309G0772 Vigna mungo HOM05D001412 ORTHO05D002473 1.8e-30 136.3 89 76.4
Atru.chr7.1615 Acer truncatum HOM05D001412 ORTHO05D002473 2.4e-30 136.0 111 64.9
CiPaw.04G148400 Carya illinoinensis HOM05D001412 ORTHO05D002473 2.4e-30 136.0 110 66.4
Sc18g0002180 Simmondsia chinensis HOM05D001412 ORTHO05D002473 2.4e-30 136.0 111 64.9
DCAR_011966 Daucus carota HOM05D001412 ORTHO05D002473 3.1e-30 135.6 109 63.3
Duzib150G1378 Durio zibethinus HOM05D001412 ORTHO05D002473 3.1e-30 135.6 110 64.5
PGR142G2286 Punica granatum HOM05D001412 ORTHO05D002473 3.1e-30 135.6 110 66.4
TAR629G0305 Trochodendron aralioides HOM05D001412 ORTHO05D002473 4.1e-30 135.2 110 68.2
ClCG11G001720 Citrullus lanatus HOM05D001412 ORTHO05D002473 5.3e-30 134.8 111 67.6
RcHm_v2.0_Chr2g0093621 Rosa chinensis HOM05D001412 ORTHO05D002473 5.3e-30 134.8 110 64.5
AUR62033945 Chenopodium quinoa HOM05D001412 ORTHO05D002473 6.9e-30 134.4 111 65.8
THA.LOC104814625 Tarenaya hassleriana HOM05D001412 ORTHO05D002473 1.5e-29 133.3 110 63.6
CARHR109930 Cardamine hirsuta HOM05D001412 ORTHO05D002473 2.0e-29 132.9 110 61.8
MBI07_g07552_MAGBIO Magnolia biondii HOM05D001412 ORTHO05D002473 2.0e-29 132.9 110 66.4
Haze_25926 Corylus avellana HOM05D001412 ORTHO05D002473 3.4e-29 132.1 113 64.6
Sp3g32870 Schrenkiella parvula HOM05D001412 ORTHO05D002473 3.4e-29 132.1 110 62.7
Rhsim05G0018500 Rhododendron simsii HOM05D001412 ORTHO05D002473 4.5e-29 131.7 110 62.7
Hund06670 Selenicereus undatus HOM05D001412 ORTHO05D002473 4.5e-29 131.7 138 55.8
BraA07t27919Z Brassica rapa HOM05D001412 ORTHO05D002473 5.9e-29 131.3 110 62.7
Cc06_g11530 Coffea canephora HOM05D001412 ORTHO05D002473 5.9e-29 131.3 115 65.2
Thhalv10022701m.g Eutrema salsugineum HOM05D001412 ORTHO05D002473 5.9e-29 131.3 110 61.8
Gorai.010G084000 Gossypium raimondii HOM05D001412 ORTHO05D002473 5.9e-29 131.3 110 63.6
BcaB03g16735 Brassica carinata HOM05D001412 ORTHO05D002473 1.0e-28 130.6 110 63.6
Carub.0003s3378 Capsella rubella HOM05D001412 ORTHO05D002473 1.0e-28 130.6 110 60.9
QL02p062340 Quercus lobata HOM05D001412 ORTHO05D002473 1.0e-28 130.6 110 62.7
Gohir.A06G073300 Gossypium hirsutum HOM05D001412 ORTHO05D002473 1.3e-28 130.2 110 63.6
Gohir.D06G072000 Gossypium hirsutum HOM05D001412 ORTHO05D002473 1.7e-28 129.8 110 62.7
Potri.018G067900 Populus trichocarpa HOM05D001412 ORTHO05D002473 1.7e-28 129.8 110 63.6
BcaC06g36589 Brassica carinata HOM05D001412 ORTHO05D002473 2.2e-28 129.4 110 62.7
EL10Ac8g19189 Beta vulgaris HOM05D001412 ORTHO05D002473 2.9e-28 129.0 110 62.7
SGA_v2.0_scaffold23G10029 Striga asiatica HOM05D001412 ORTHO05D002473 2.9e-28 129.0 112 63.4
MSTRG.10553 Avicennia marina HOM05D001412 ORTHO05D002473 6.5e-28 127.9 113 65.5
BcaB08g34868 Brassica carinata HOM05D001412 ORTHO05D002473 8.5e-28 127.5 111 62.2
FvH4_1g07730 Fragaria vesca HOM05D001412 ORTHO05D002473 8.5e-28 127.5 110 60.0
FAN28G0937 Fragaria x ananassa HOM05D001412 ORTHO05D002473 8.5e-28 127.5 111 59.5
Sed0000909 Sechium edule HOM05D001412 ORTHO05D002473 8.5e-28 127.5 111 64.0
vmacro06299 Vaccinium macrocarpon HOM05D001412 ORTHO05D002473 8.5e-28 127.5 81 80.2
AT2G19490 Arabidopsis thaliana HOM05D001412 ORTHO05D002473 1.1e-27 127.1 110 60.0
FAN23G2148 Fragaria x ananassa HOM05D001412 ORTHO05D002473 1.4e-27 126.7 112 58.0
BolC7t40656H Brassica oleracea HOM05D001412 ORTHO05D002473 2.5e-27 125.9 112 62.5
COL.COLO4_18188 Corchorus olitorius HOM05D001412 ORTHO05D002473 2.5e-27 125.9 110 60.0
Nitab4.5_0006126g0010 Nicotiana tabacum HOM05D001412 ORTHO05D002473 4.2e-27 125.2 111 63.1
FAN26G1529 Fragaria x ananassa HOM05D001412 ORTHO05D002473 5.5e-27 124.8 112 57.1
Sed0016179 Sechium edule HOM05D001412 ORTHO05D002473 5.5e-27 124.8 111 64.0
Aa31LG8G16510 Aethionema arabicum HOM05D001412 ORTHO05D002473 9.4e-27 124.0 110 58.2
FAN19G1811 Fragaria x ananassa HOM05D001412 ORTHO05D002473 9.4e-27 124.0 115 59.1
Nitab4.5_0003493g0020 Nicotiana tabacum HOM05D001412 ORTHO05D002473 9.4e-27 124.0 111 63.1
FAN26G1795 Fragaria x ananassa HOM05D001412 ORTHO05D002473 1.2e-26 123.6 112 56.2
Aqoxy5G03005 Aquilegia oxysepala HOM05D001412 ORTHO05D002473 2.1e-26 122.9 115 60.0
CsaV3_2G001420 Cucumis sativus L. HOM05D001412 ORTHO05D002473 2.1e-26 122.9 112 59.8
Migut.L01503 Erythranthe guttata HOM05D001412 ORTHO05D002473 2.1e-26 122.9 112 63.4
Eucgr.C03475 Eucalyptus grandis HOM05D001412 ORTHO05D002473 2.1e-26 122.9 110 64.5
DCAR_024711 Daucus carota HOM05D001412 ORTHO05D001460 2.7e-26 122.5 91 70.3
Duzib168G0737 Durio zibethinus HOM05D001412 ORTHO05D002473 3.6e-26 122.1 110 60.0
SHI05040 Sapria himalayana HOM05D001412 ORTHO05D002473 3.6e-26 122.1 95 69.5
Sabra18G0059500 Salix brachista HOM05D001412 ORTHO05D002473 4.7e-26 121.7 92 69.6
CsaV3_2G001430 Cucumis sativus L. HOM05D001412 ORTHO05D002473 7.9e-26 120.9 110 60.9
Solyc05g055780.4 Solanum lycopersicum HOM05D001412 ORTHO05D002473 7.9e-26 120.9 114 59.6
TWI32G1321 Tripterygium wilfordii HOM05D001412 ORTHO05D002473 7.9e-26 120.9 119 60.5
MELO3C031352.2 Cucumis melo HOM05D001412 ORTHO05D002473 1.0e-25 120.6 112 60.7
SGA_v2.0_scaffold21G09396 Striga asiatica HOM05D001412 ORTHO05D002473 1.8e-25 119.8 111 60.4
HanXRQChr06g0178581 Helianthus annuus HOM05D001412 ORTHO05D002473 2.3e-25 119.4 110 60.0
Sopen05g034190 Solanum pennellii HOM05D001412 ORTHO05D002473 2.3e-25 119.4 82 70.7
Cpa.g.sc61.12 Carica papaya HOM05D001412 ORTHO05D002473 3.0e-25 119.0 72 83.3
CSS0044456 Camellia sinensis var. sinensis HOM05D001412 ORTHO05D002473 5.1e-25 118.2 109 63.3
Lsat_1_v5_gn_8_86900 Lactuca sativa HOM05D001412 ORTHO05D002473 5.1e-25 118.2 111 57.7
PGSC0003DMG400023358 Solanum tuberosum HOM05D001412 ORTHO05D002473 5.1e-25 118.2 114 57.9
A09p59300 Brassica napus HOM05D001412 ORTHO05D002473 6.7e-25 117.9 88 68.2
BraA09t41312Z Brassica rapa HOM05D001412 ORTHO05D002473 6.7e-25 117.9 88 68.2
CiPaw.03G214000 Carya illinoinensis HOM05D001412 ORTHO05D002473 6.7e-25 117.9 110 60.0
Ca_21284_v3 Cicer arietinum L. HOM05D001412 ORTHO05D002473 6.7e-25 117.9 72 84.7
CDE05G3022 Ceratophyllum demersum HOM05D001412 ORTHO05D002473 8.8e-25 117.5 104 60.6
CDE05G3162 Ceratophyllum demersum HOM05D001412 ORTHO05D002473 8.8e-25 117.5 110 59.1
HPP92_002720 Vanilla planifolia HOM05D001412 ORTHO05D002473 1.1e-24 117.1 88 65.9
AL3G48760 Arabidopsis lyrata HOM05D001412 ORTHO05D002473 2.6e-24 115.9 110 58.2
Hma1.2p1_0476F.1_g160810 Hydrangea macrophylla HOM05D001412 ORTHO05D002473 2.6e-24 115.9 73 79.5
Hma1.2p1_1838F.1_g304850 Hydrangea macrophylla HOM05D001412 ORTHO05D002473 2.6e-24 115.9 73 79.5
ECA236G3807 Erigeron canadensis HOM05D001412 ORTHO05D002473 3.3e-24 115.5 110 54.5
CSS0000466 Camellia sinensis var. sinensis HOM05D001412 ORTHO05D021557 4.4e-24 115.2 73 75.3
CAN.G694.21 Capsicum annuum HOM05D001412 ORTHO05D002473 9.7e-24 114.0 91 61.5
Actinidia25245 Actinidia chinensis HOM05D001412 ORTHO05D002473 1.3e-23 113.6 71 78.9
C08p42560 Brassica napus HOM05D001412 ORTHO05D002473 1.3e-23 113.6 89 67.4
BolC8t51817H Brassica oleracea HOM05D001412 ORTHO05D002473 1.3e-23 113.6 89 67.4
ClCG03G015460 Citrullus lanatus HOM05D001412 ORTHO05D002473 3.7e-23 112.1 110 60.9
Oeu017606.1 Olea europaea HOM05D001412 ORTHO05D002473 3.7e-23 112.1 82 68.3
ATR0582G297 Amborella trichopoda HOM05D001412 ORTHO05D002473 4.8e-23 111.7 87 64.4
Os01g0901200 Oryza sativa ssp. japonica HOM05D001412 ORTHO05D002473 4.8e-23 111.7 93 62.4
Peaxi162Scf00028g00412 Petunia axillaris HOM05D001412 ORTHO05D002473 6.3e-23 111.3 71 76.1
BcaC07g41250 Brassica carinata HOM05D001412 ORTHO05D002473 8.2e-23 110.9 89 66.3
C07p02580 Brassica napus HOM05D001412 ORTHO05D002473 8.2e-23 110.9 85 64.7
Manes.03G035200 Manihot esculenta HOM05D001412 ORTHO05D002473 8.2e-23 110.9 72 73.6
A07p01290 Brassica napus HOM05D001412 ORTHO05D002473 1.8e-22 109.8 76 72.4
MELO3C004628.2 Cucumis melo HOM05D001412 ORTHO05D002473 1.8e-22 109.8 95 61.1
vmacro17255 Vaccinium macrocarpon HOM05D001412 ORTHO05D002473 1.8e-22 109.8 80 70.0
MSTRG.19503 Avicennia marina HOM05D001412 ORTHO05D021557 4.5e-21 105.1 109 57.8
Sed0001537 Sechium edule HOM05D001412 ORTHO05D002473 7.7e-21 104.4 110 56.4
Zm00001eb365600 Zea mays HOM05D001412 ORTHO05D002473 7.7e-21 104.4 90 62.2
unitig_578.g16417 Utricularia gibba HOM05D001412 ORTHO05D002473 5.0e-20 101.7 72 70.8
PSO478G3238 Papaver somniferum HOM05D001412 ORTHO05D002473 9.4e-19 97.4 113 51.3
Eucgr.C00874 Eucalyptus grandis HOM05D001412 ORTHO05D002473 1.2e-18 97.1 112 50.9
Ciclev10008716m.g Citrus clementina HOM05D001412 ORTHO05D002473 6.1e-18 94.7 56 82.1
PSO017G0435 Papaver somniferum HOM05D001412 ORTHO05D002473 6.1e-18 94.7 113 50.4
Eucgr.L02896 Eucalyptus grandis HOM05D001412 ORTHO05D002473 5.2e-17 91.7 56 80.4
Os11g0302700 Oryza sativa ssp. japonica HOM05D001412 ORTHO05D002473 8.8e-17 90.9 80 58.8
Oeu006023.1 Olea europaea HOM05D001412 ORTHO05D002473 1.5e-16 90.1 56 76.8
SEGI_37152 Sequoiadendron giganteum HOM05D001412 ORTHO05D002473 5.7e-16 88.2 81 51.9
Migut.J00582 Erythranthe guttata HOM05D001412 ORTHO05D002473 1.8e-14 83.2 56 71.4
Cc00_g30950 Coffea canephora HOM05D001412 ORTHO05D021557 3.1e-14 82.4 56 71.4
Zm00001eb144420 Zea mays HOM05D001412 ORTHO05D002473 9.1e-14 80.9 56 71.4
HanXRQChr04g0126181 Helianthus annuus HOM05D001412 ORTHO05D002473 2.6e-13 79.3 56 66.1
Psat7g019560 Pisum sativum HOM05D001412 ORTHO05D002473 4.5e-13 78.6 56 73.2
vmacro07388 Vaccinium macrocarpon HOM05D001412 ORTHO05D021557 1.6e-10 70.1 62 61.3
Mapoly0006s0306 Marchantia polymorpha HOM05D001412 ORTHO05D002473 4.7e-10 68.6 85 49.4
PSO210G0216 Papaver somniferum HOM05D001412 ORTHO05D002473 2.3e-09 66.2 43 67.4
PSO210G0559 Papaver somniferum HOM05D001412 ORTHO05D002473 4.0e-09 65.5 43 67.4
Haze_19777 Corylus avellana HOM05D001412 ORTHO05D002473 1.4e-06 57.0 62 46.8
Cfa016766 Carpinus fangiana HOM05D001412 ORTHO05D002473 1.8e-06 56.6 60 48.3
ClCG04G003900 Citrullus lanatus HOM05D001412 ORTHO05D002473 1.8e-06 56.6 61 44.3
Thecc.06G067700 Theobroma cacao HOM05D001412 ORTHO05D002473 1.8e-06 56.6 60 48.3
MD08G1164600 Malus domestica HOM05D001412 ORTHO05D002473 2.4e-06 56.2 115 37.4
Prupe.7G052200 Prunus persica HOM05D001412 ORTHO05D002473 4.1e-06 55.5 91 37.4
Duzib093G1519 Durio zibethinus HOM05D001412 ORTHO05D002473 7.0e-06 54.7 60 50.0
QL03p000878 Quercus lobata HOM05D001412 ORTHO05D002473 7.0e-06 54.7 60 46.7
QL93p0140_0005 Quercus lobata HOM05D001412 ORTHO05D002473 7.0e-06 54.7 60 46.7
SEGI_13396 Sequoiadendron giganteum HOM05D001412 ORTHO05D002473 7.0e-06 54.7 55 50.9
Migut.J01711 Erythranthe guttata HOM05D001412 ORTHO05D002473 9.1e-06 54.3 65 44.6
Peaxi162Scf00002g00362 Petunia axillaris HOM05D001412 ORTHO05D002473 9.1e-06 54.3 60 48.3


User provided reference genes

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