Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.13G103400 Glycine max HOM05D002570 ORTHO05D002689 2.5e-83 312.0 149 100.0
Glyma.17G055600 Glycine max HOM05D002570 ORTHO05D002689 7.1e-38 161.0 121 69.4
VMungo1215G3302 Vigna mungo HOM05D002570 ORTHO05D002689 4.7e-34 148.3 108 71.3
Phvul.003G137400 Phaseolus vulgaris HOM05D002570 ORTHO05D002689 2.9e-23 112.5 85 68.2
Lj4g0013925 Lotus japonicus HOM05D002570 ORTHO05D002689 1.0e-20 104.0 113 51.3
TPR.G27566 Trifolium pratense HOM05D002570 ORTHO05D002689 1.2e-16 90.5 114 43.9
arahy.Tifrunner.gnm1.ann1.ANT7GU Arachis hypogaea HOM05D002570 ORTHO05D002689 9.9e-16 87.4 102 51.0
arahy.Tifrunner.gnm1.ann1.G00P8D Arachis hypogaea HOM05D002570 ORTHO05D002689 1.3e-15 87.0 102 53.9
Medtr4g126400 Medicago truncatula HOM05D002570 ORTHO05D002689 1.3e-15 87.0 112 42.0
Psat4g014680 Pisum sativum HOM05D002570 ORTHO05D002689 1.1e-14 84.0 112 42.9
Lalb_Chr12g0199761 Lupinus albus HOM05D002570 ORTHO05D002689 1.0e-12 77.4 101 44.6
Cfa013397 Carpinus fangiana HOM05D002570 ORTHO05D002689 3.3e-11 72.4 133 37.6
Sabra06G0052300 Salix brachista HOM05D002570 ORTHO05D002689 7.4e-11 71.2 112 42.0
Potri.006G070200 Populus trichocarpa HOM05D002570 ORTHO05D002689 2.1e-10 69.7 108 41.7
Potri.018G131900 Populus trichocarpa HOM05D002570 ORTHO05D002689 4.8e-10 68.6 111 46.8
Dinv25488 Davidia involucrata HOM05D002570 ORTHO05D002689 1.4e-09 67.0 106 39.6
Ciclev10010203m.g Citrus clementina HOM05D002570 ORTHO05D002689 5.3e-09 65.1 116 37.1
Hma1.2p1_0235F.1_g098980 Hydrangea macrophylla HOM05D002570 ORTHO05D002689 5.3e-09 65.1 63 50.8
FvH4_4g06680 Fragaria vesca HOM05D030384 ORTHO05D002689 5.8e-08 61.6 100 40.0
FAN12G3444 Fragaria x ananassa HOM05D030384 ORTHO05D002689 5.8e-08 61.6 100 40.0
PGR102G1262 Punica granatum HOM05D002570 ORTHO05D002689 9.9e-08 60.8 117 35.9
Cc04_g05480 Coffea canephora HOM05D002570 ORTHO05D002689 1.3e-07 60.5 60 46.7
Thecc.02G311400 Theobroma cacao HOM05D002570 ORTHO05D002689 1.3e-07 60.5 70 40.0
FAN22G1225 Fragaria x ananassa HOM05D002570 ORTHO05D002689 2.2e-07 59.7 73 47.9
Nitab4.5_0004194g0090 Nicotiana tabacum HOM05D002570 ORTHO05D002689 2.2e-07 59.7 66 47.0
Nitab4.5_0007293g0020 Nicotiana tabacum HOM05D002570 ORTHO05D002689 2.2e-07 59.7 66 47.0
Duzib251G0386 Durio zibethinus HOM05D002570 ORTHO05D002689 2.9e-07 59.3 113 34.5
TWI60G0727 Tripterygium wilfordii HOM05D002570 ORTHO05D002689 3.8e-07 58.9 89 42.7
Actinidia08926 Actinidia chinensis HOM05D002570 ORTHO05D002689 8.4e-07 57.8 66 42.4
Dinv13685 Davidia involucrata HOM05D002570 ORTHO05D002689 1.9e-06 56.6 66 43.9
Dinv21443 Davidia involucrata HOM05D002570 ORTHO05D002689 1.9e-06 56.6 66 43.9
Lsat_1_v5_gn_1_30640 Lactuca sativa HOM05D002570 ORTHO05D002689 1.9e-06 56.6 103 33.0
Solyc03g117840.4 Solanum lycopersicum HOM05D002570 ORTHO05D002689 1.9e-06 56.6 66 43.9
Gohir.D10G050000 Gossypium hirsutum HOM05D002570 ORTHO05D002689 2.4e-06 56.2 68 42.6
Gorai.011G053600 Gossypium raimondii HOM05D002570 ORTHO05D002689 2.4e-06 56.2 66 43.9
Gohir.A12G155900 Gossypium hirsutum HOM05D002570 ORTHO05D002689 3.2e-06 55.8 68 42.6
HanXRQChr04g0099961 Helianthus annuus HOM05D002570 ORTHO05D002689 3.2e-06 55.8 61 45.9
Oeu012866.1 Olea europaea HOM05D002570 ORTHO05D002689 3.2e-06 55.8 67 43.3
Thecc.06G132900 Theobroma cacao HOM05D002570 ORTHO05D002689 3.2e-06 55.8 66 47.0
CiPaw.01G051100 Carya illinoinensis HOM05D002570 ORTHO05D002689 4.2e-06 55.5 108 33.3
Eucgr.J03139 Eucalyptus grandis HOM05D002570 ORTHO05D002689 4.2e-06 55.5 110 34.5
Gohir.D12G159000 Gossypium hirsutum HOM05D002570 ORTHO05D002689 4.2e-06 55.5 73 41.1
MD09G1230400 Malus domestica HOM05D002570 ORTHO05D002689 4.2e-06 55.5 117 33.3
Peaxi162Scf00314g00938 Petunia axillaris HOM05D002570 ORTHO05D002689 4.2e-06 55.5 66 43.9
Sopen03g036750 Solanum pennellii HOM05D002570 ORTHO05D002689 4.2e-06 55.5 66 42.4
CSS0011601 Camellia sinensis var. sinensis HOM05D002570 ORTHO05D002689 5.5e-06 55.1 113 34.5
CSS0038527 Camellia sinensis var. sinensis HOM05D002570 ORTHO05D002689 5.5e-06 55.1 113 34.5
Gorai.008G172100 Gossypium raimondii HOM05D002570 ORTHO05D002689 5.5e-06 55.1 73 41.1
COL.COLO4_30895 Corchorus olitorius HOM05D002570 ORTHO05D002689 7.1e-06 54.7 66 45.5
Haze_15246 Corylus avellana HOM05D002570 ORTHO05D002689 7.1e-06 54.7 118 33.1
Prupe.1G069600 Prunus persica HOM05D002570 ORTHO05D002689 9.3e-06 54.3 117 34.2
PGSC0003DMG400014220 Solanum tuberosum HOM05D002570 ORTHO05D002689 9.3e-06 54.3 66 42.4
GSVIVG01016063001 Vitis vinifera HOM05D002570 ORTHO05D002689 9.3e-06 54.3 118 35.6


User provided reference genes

Program Settings