Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.13G103300 Glycine max HOM05D008207 ORTHO05D010373 1.6e-227 792.3 377 100.0
Phvul.003G137466 Phaseolus vulgaris HOM05D008207 ORTHO05D010373 1.2e-169 600.1 353 81.3
VMungo1215G1326 Vigna mungo HOM05D008207 ORTHO05D010373 2.2e-168 595.9 346 80.9
Ca_21275_v3 Cicer arietinum L. HOM05D008207 ORTHO05D010373 8.9e-154 547.4 380 71.8
TPR.G5411 Trifolium pratense HOM05D008207 ORTHO05D010373 6.6e-149 531.2 364 73.4
Medtr4g126910 Medicago truncatula HOM05D008207 ORTHO05D010373 5.2e-146 521.5 374 70.3
Lj4g0004064 Lotus japonicus HOM05D008207 ORTHO05D010373 8.9e-146 520.8 357 72.8
Lalb_Chr12g0199751 Lupinus albus HOM05D008207 ORTHO05D010373 1.9e-143 513.1 349 73.1
arahy.Tifrunner.gnm1.ann1.PC6R8Z Arachis hypogaea HOM05D008207 ORTHO05D010373 1.1e-138 497.3 372 69.6
arahy.Tifrunner.gnm1.ann1.7T8Q8E Arachis hypogaea HOM05D008207 ORTHO05D010373 5.2e-138 495.0 389 67.4
CiPaw.07G200900 Carya illinoinensis HOM05D008207 ORTHO05D010373 9.9e-129 464.2 279 76.3
RcHm_v2.0_Chr4g0398551 Rosa chinensis HOM05D008207 ORTHO05D010373 3.2e-127 459.1 319 67.7
FAN17G2040 Fragaria x ananassa HOM05D008207 ORTHO05D010373 9.2e-127 457.6 289 72.3
TAR625G1057 Trochodendron aralioides HOM05D008207 ORTHO05D010373 2.1e-123 446.4 320 66.2
GSVIVG01029258001 Vitis vinifera HOM05D008207 ORTHO05D010373 2.8e-123 446.0 289 73.0
FAN22G1797 Fragaria x ananassa HOM05D008207 ORTHO05D010373 1.5e-121 440.3 307 67.4
CSS0025795 Camellia sinensis var. sinensis HOM05D008207 ORTHO05D010373 5.4e-119 431.8 284 71.1
Dinv41210 Davidia involucrata HOM05D008207 ORTHO05D010373 1.6e-118 430.3 291 71.8
MELO3C017404.2 Cucumis melo HOM05D008207 ORTHO05D010373 2.1e-118 429.9 296 68.9
CsaV3_1G032120 Cucumis sativus L. HOM05D008207 ORTHO05D010373 1.3e-117 427.2 277 72.2
FAN07G0484 Fragaria x ananassa HOM05D008207 ORTHO05D010373 3.0e-117 426.0 306 65.4
Hma1.2p1_0235F.1_g099000 Hydrangea macrophylla HOM05D008207 ORTHO05D010373 1.9e-116 423.3 287 71.8
Sed0019966 Sechium edule HOM05D008207 ORTHO05D010373 5.6e-116 421.8 280 70.0
Aqoxy7G02948 Aquilegia oxysepala HOM05D008207 ORTHO05D010373 1.3e-115 420.6 283 70.3
MBI14_g19451_MAGBIO Magnolia biondii HOM05D008207 ORTHO05D010373 1.4e-114 417.2 329 62.3
ClCG06G013910 Citrullus lanatus HOM05D008207 ORTHO05D010373 3.4e-113 412.5 297 67.7
Prupe.1G068900 Prunus persica HOM05D008207 ORTHO05D010373 4.9e-112 408.7 243 77.4
Eucgr.C00072 Eucalyptus grandis HOM05D008207 ORTHO05D010373 3.2e-111 406.0 264 70.1
Psat4g014640 Pisum sativum HOM05D008207 ORTHO05D010373 5.4e-111 405.2 259 75.7
PSO170G1964 Papaver somniferum HOM05D008207 ORTHO05D010373 6.6e-109 398.3 281 66.2
AUR62033242 Chenopodium quinoa HOM05D008207 ORTHO05D010373 1.5e-108 397.1 289 66.8
Sabra12G0024900 Salix brachista HOM05D008207 ORTHO05D010373 7.4e-108 394.8 353 58.1
FAN12G1624 Fragaria x ananassa HOM05D008207 ORTHO05D000286 4.5e-105 385.6 276 67.0
ATR0580G068 Amborella trichopoda HOM05D008207 ORTHO05D010373 2.2e-104 383.3 284 64.1
Hund26321 Selenicereus undatus HOM05D008207 ORTHO05D010373 6.0e-102 375.2 303 63.0
Rhsim01G0002700 Rhododendron simsii HOM05D008207 ORTHO05D010373 5.5e-95 352.1 210 76.7
Aqoxy5G03535 Aquilegia oxysepala HOM05D008207 ORTHO05D010373 3.9e-93 345.9 256 67.6
AUR62021326 Chenopodium quinoa HOM05D008207 ORTHO05D010373 8.7e-93 344.7 282 62.1
DCAR_009922 Daucus carota HOM05D008207 ORTHO05D010373 1.5e-92 344.0 223 71.3
vmacro13136 Vaccinium macrocarpon HOM05D008207 ORTHO05D010373 3.8e-88 329.3 312 55.8
CDE05G0633 Ceratophyllum demersum HOM05D008207 ORTHO05D010373 1.1e-87 327.8 277 58.5
Pp3c22_15400 Physcomitrium patens HOM05D008207 ORTHO05D010373 1.6e-86 323.9 301 53.5
EL10Ac8g18310 Beta vulgaris HOM05D008207 ORTHO05D010373 4.1e-82 309.3 256 62.5
Haze_22076 Corylus avellana HOM05D008207 ORTHO05D010373 1.7e-80 303.9 197 75.1
FvH4_4g06651 Fragaria vesca HOM05D008207 ORTHO05D010373 2.1e-78 297.0 195 71.3
Mapoly0010s0073 Marchantia polymorpha HOM05D008207 ORTHO05D010373 2.2e-72 276.9 244 54.1
MD16G1242100 Malus domestica HOM05D008207 ORTHO05D010373 2.5e-71 273.5 225 60.4
Eucgr.L03679 Eucalyptus grandis HOM05D008207 ORTHO05D010373 1.1e-55 221.5 166 62.7
Potri.012G036400 Populus trichocarpa HOM05D008207 ORTHO05D010373 3.7e-51 206.5 149 68.5
SMO351G0474 Selaginella moellendorffii HOM05D008207 ORTHO05D010373 8.0e-46 188.7 280 39.6
Actinidia01309 Actinidia chinensis HOM05D008207 ORTHO05D010373 2.3e-45 187.2 113 74.3
Glyma.16G118000 Glycine max HOM05D008207 ORTHO05D010373 2.6e-44 183.7 94 91.5
Actinidia01310 Actinidia chinensis HOM05D008207 ORTHO05D010373 3.7e-43 179.9 129 65.1
Os02g0462401 Oryza sativa ssp. japonica HOM05D008207 ORTHO05D010373 5.0e-40 169.5 208 47.6
Psat0s6286g0080 Pisum sativum HOM05D008207 ORTHO05D010373 2.6e-36 157.1 93 79.6
arahy.Tifrunner.gnm1.ann1.G9LR05 Arachis hypogaea HOM05D008207 ORTHO05D010373 4.4e-36 156.4 95 78.9
MD16G1242000 Malus domestica HOM05D008207 ORTHO05D010373 5.4e-34 149.4 97 68.0
Glyma.02G093251 Glycine max HOM05D008207 ORTHO05D010373 3.9e-32 143.3 70 95.7
arahy.Tifrunner.gnm1.ann1.QBT4P1 Arachis hypogaea HOM05D008207 ORTHO05D010373 1.4e-29 134.8 103 67.0
Psat0s6286g0040 Pisum sativum HOM05D003133 ORTHO05D010373 6.4e-27 125.9 70 81.4
SEGI_04181 Sequoiadendron giganteum HOM05D008207 ORTHO05D010373 1.1e-26 125.2 78 75.6
SEGI_33506 Sequoiadendron giganteum HOM05D008207 ORTHO05D010373 5.0e-24 116.3 118 46.6
MCO11G473 Micromonas commoda HOM05D008207 ORTHO05D010373 1.5e-23 114.8 249 34.1
Haze_22075 Corylus avellana HOM05D008207 ORTHO05D010373 1.6e-22 111.3 55 89.1
Os02g0462300 Oryza sativa ssp. japonica HOM05D008207 ORTHO05D010373 1.4e-18 98.2 58 72.4
SEGI_16784 Sequoiadendron giganteum HOM05D008207 ORTHO05D010373 8.6e-16 89.0 49 73.5
Sabra15G0023300 Salix brachista HOM05D001936 ORTHO05D002296 7.8e-09 65.9 63 57.1


User provided reference genes

Program Settings