Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.13G102550 Glycine max HOM05D007669 ORTHO05D009624 1.1e-140 503.4 273 100.0
Glyma.17G056500 Glycine max HOM05D007669 ORTHO05D009624 2.6e-110 402.5 274 83.6
VMungo1215G2771 Vigna mungo HOM05D007669 ORTHO05D009624 7.2e-105 384.4 275 78.9
Phvul.003G138500 Phaseolus vulgaris HOM05D007669 ORTHO05D009624 2.6e-99 365.9 273 77.3
Lj4g0015120 Lotus japonicus HOM05D007669 ORTHO05D009624 3.7e-77 292.4 277 63.9
TPR.G5403 Trifolium pratense HOM05D007669 ORTHO05D009624 5.6e-73 278.5 248 64.5
arahy.Tifrunner.gnm1.ann1.YI9GDS Arachis hypogaea HOM05D007669 ORTHO05D009624 8.0e-72 274.6 259 63.3
arahy.Tifrunner.gnm1.ann1.BQQL35 Arachis hypogaea HOM05D007669 ORTHO05D009624 3.4e-70 269.2 259 62.2
Lj2g0020468 Lotus japonicus HOM05D007669 ORTHO05D009624 4.6e-67 258.8 277 60.3
Psat4g013920 Pisum sativum HOM05D007669 ORTHO05D009624 3.1e-63 246.1 267 56.9
Ca_21270_v3 Cicer arietinum L. HOM05D007669 ORTHO05D009624 4.0e-63 245.7 269 56.1
Medtr4g126780 Medicago truncatula HOM05D007669 ORTHO05D009624 4.9e-61 238.8 257 56.0
Lalb_Chr07g0180781 Lupinus albus HOM05D007669 ORTHO05D009624 6.4e-61 238.4 276 53.3
Cfa013482 Carpinus fangiana HOM05D007669 ORTHO05D009624 9.9e-46 188.0 268 43.7
CiPaw.08G030700 Carya illinoinensis HOM05D007669 ORTHO05D009624 7.8e-43 178.3 285 42.8
TWI34G1867 Tripterygium wilfordii HOM05D007669 ORTHO05D009624 6.2e-40 168.7 268 43.3
Dinv25484 Davidia involucrata HOM05D007669 ORTHO05D009624 1.1e-36 157.9 290 40.0
CANSAT11G2077 Cannabis sativa HOM05D007669 ORTHO05D009624 1.7e-34 150.6 281 38.4
Potri.018G133300 Populus trichocarpa HOM05D007669 ORTHO05D009624 8.7e-34 148.3 239 41.8
Ciclev10007518m.g Citrus clementina HOM05D007669 ORTHO05D009624 1.9e-33 147.1 248 39.9
Cpa.g.sc115.51 Carica papaya HOM05D007669 ORTHO05D009624 4.3e-33 146.0 273 39.9
Manes.14G174400 Manihot esculenta HOM05D007669 ORTHO05D009624 1.3e-32 144.4 280 38.9
MD13G1236300 Malus domestica HOM05D007669 ORTHO05D009624 8.1e-32 141.7 273 37.7
Sabra18G0113000 Salix brachista HOM05D007669 ORTHO05D009624 8.1e-32 141.7 239 41.0
GSVIVG01029262001 Vitis vinifera HOM05D007669 ORTHO05D009624 8.1e-32 141.7 272 37.9
Duzib177G0349 Durio zibethinus HOM05D007669 ORTHO05D009624 2.4e-31 140.2 256 38.7
MELO3C017409.2 Cucumis melo HOM05D007669 ORTHO05D009624 5.3e-31 139.0 257 38.9
Sed0018351 Sechium edule HOM05D007669 ORTHO05D009624 9.9e-30 134.8 245 37.6
FAN07G2841 Fragaria x ananassa HOM05D007669 ORTHO05D009624 1.7e-29 134.0 272 35.7
QL11p009976 Quercus lobata HOM05D007669 ORTHO05D009624 2.9e-29 133.3 402 29.4
ClCG06G013870 Citrullus lanatus HOM05D007669 ORTHO05D009624 6.4e-29 132.1 250 37.2
RcHm_v2.0_Chr4g0398451 Rosa chinensis HOM05D007669 ORTHO05D009624 6.4e-29 132.1 271 36.2
Migut.K00227 Erythranthe guttata HOM05D007669 ORTHO05D009624 1.1e-28 131.3 280 35.7
HanXRQChr09g0244441 Helianthus annuus HOM05D007669 ORTHO05D009624 1.4e-28 131.0 261 36.0
Gorai.009G262500 Gossypium raimondii HOM05D007669 ORTHO05D009624 5.4e-28 129.0 206 37.9
Nn8g40420 Nelumbo nucifera HOM05D007669 ORTHO05D009624 9.3e-28 128.3 258 35.7
Oeu025206.1 Olea europaea HOM05D007669 ORTHO05D009624 9.3e-28 128.3 191 42.4
Gohir.D05G246300 Gossypium hirsutum HOM05D007669 ORTHO05D009624 1.2e-27 127.9 206 37.9
Gohir.A05G248100 Gossypium hirsutum HOM05D007669 ORTHO05D009624 2.7e-27 126.7 206 37.4
Cc06_g12900 Coffea canephora HOM05D007669 ORTHO05D009624 4.6e-27 125.9 281 33.5
Sc13g0008100 Simmondsia chinensis HOM05D007669 ORTHO05D009624 4.6e-27 125.9 257 34.6
Lsat_1_v5_gn_7_54021 Lactuca sativa HOM05D007669 ORTHO05D009624 7.9e-27 125.2 262 35.9
FAN17G0559 Fragaria x ananassa HOM05D007669 ORTHO05D009624 1.0e-26 124.8 272 33.8
SalBow1G4073 Salvia bowleyana HOM05D007669 ORTHO05D009624 1.8e-26 124.0 245 35.9
Eucgr.D01111 Eucalyptus grandis HOM05D007669 ORTHO05D009624 6.7e-26 122.1 269 34.9
PGR044G0001 Punica granatum HOM05D007669 ORTHO05D009624 6.7e-26 122.1 264 34.1
PSO170G1866 Papaver somniferum HOM05D007669 ORTHO05D009624 2.8e-24 116.7 260 35.4
SGA_v2.0_scaffold17G07944 Striga asiatica HOM05D007669 ORTHO05D009624 2.8e-24 116.7 252 34.9
Ah.09g232160 Amaranthus hybridus HOM05D007669 ORTHO05D009624 6.2e-24 115.5 279 35.1
Aqoxy7G02932 Aquilegia oxysepala HOM05D007669 ORTHO05D009624 1.1e-23 114.8 253 36.8
Rhsim01G0007900 Rhododendron simsii HOM05D007669 ORTHO05D009624 2.4e-23 113.6 335 31.3
PSO063G2993 Papaver somniferum HOM05D007669 ORTHO05D009624 6.9e-23 112.1 277 34.7
vmacro13101 Vaccinium macrocarpon HOM05D007669 ORTHO05D009624 1.2e-22 111.3 252 35.7
Haze_22063 Corylus avellana HOM05D007669 ORTHO05D009624 7.6e-22 108.6 152 44.7
DCAR_017992 Daucus carota HOM05D007669 ORTHO05D009624 1.3e-21 107.8 194 36.6
Hund06703 Selenicereus undatus HOM05D007669 ORTHO05D009624 8.4e-21 105.1 313 31.6
MBI16_g09333_MAGBIO Magnolia biondii HOM05D007669 ORTHO05D009624 9.3e-20 101.7 255 34.5
AUR62031310 Chenopodium quinoa HOM05D007669 ORTHO05D009624 1.6e-19 100.9 287 32.1
EL10Ac8g19326 Beta vulgaris HOM05D007669 ORTHO05D009624 6.0e-19 99.0 256 32.4
Hma1.2p1_0726F.1_g208990 Hydrangea macrophylla HOM05D007669 ORTHO05D009624 1.8e-18 97.4 258 30.2
ATR0580G240 Amborella trichopoda HOM05D007669 ORTHO05D009624 2.3e-18 97.1 276 30.4
ECA240G0205 Erigeron canadensis HOM05D007669 ORTHO05D009624 5.3e-15 85.9 172 35.5
Lj3A156T43 Lonicera japonica HOM05D007669 ORTHO05D009624 5.8e-14 82.4 172 34.3
FAN22G2123 Fragaria x ananassa HOM05D007669 ORTHO05D009624 7.1e-12 75.5 94 40.4
Prupe.1G068100 Prunus persica HOM05D007669 ORTHO05D009624 4.6e-11 72.8 94 40.4
COL.COLO4_25059 Corchorus olitorius HOM05D007669 ORTHO05D009624 1.0e-10 71.6 165 35.2
Zm00001eb432590 Zea mays HOM05D007669 ORTHO05D009624 8.7e-10 68.6 222 27.0
CDE02G1706 Ceratophyllum demersum HOM05D007669 ORTHO05D009624 6.9e-07 58.9 90 33.3


User provided reference genes

Program Settings