Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.13G101000 Glycine max HOM05D006498 ORTHO05D006377 3.4e-158 562.0 371 100.0
VMungo1215G1417 Vigna mungo HOM05D006498 ORTHO05D006377 1.8e-111 406.8 388 69.8
Phvul.003G140900 Phaseolus vulgaris HOM05D006498 ORTHO05D006377 8.5e-109 397.9 389 71.7
Glyma.17G058700 Glycine max HOM05D006498 ORTHO05D006377 1.0e-98 364.4 377 74.3
Ca_21256_v3 Cicer arietinum L. HOM05D006498 ORTHO05D006377 1.2e-81 307.8 382 59.4
Medtr4g127350 Medicago truncatula HOM05D006498 ORTHO05D006377 1.7e-80 303.9 401 59.4
Lj4g0022386 Lotus japonicus HOM05D006498 ORTHO05D006377 1.4e-79 300.8 316 63.0
arahy.Tifrunner.gnm1.ann1.YNM2K2 Arachis hypogaea HOM05D006498 ORTHO05D006377 6.6e-77 292.0 321 62.6
Psat0s3389g0200 Pisum sativum HOM05D006498 ORTHO05D006377 1.1e-76 291.2 297 64.3
arahy.Tifrunner.gnm1.ann1.XIUU7W Arachis hypogaea HOM05D006498 ORTHO05D006377 7.3e-76 288.5 319 61.4
CiPaw.07G197600 Carya illinoinensis HOM05D006498 ORTHO05D006377 2.1e-59 233.8 384 52.1
CSS0012471 Camellia sinensis var. sinensis HOM05D006498 ORTHO05D006377 8.1e-59 231.9 297 51.9
Manes.14G159400 Manihot esculenta HOM05D006498 ORTHO05D006377 8.1e-59 231.9 294 55.8
Eucgr.C00107 Eucalyptus grandis HOM05D006498 ORTHO05D006377 5.8e-57 225.7 289 55.7
Dinv28799 Davidia involucrata HOM05D006498 ORTHO05D006377 7.6e-57 225.3 253 57.7
Hma1.2p1_0491F.1_g164630 Hydrangea macrophylla HOM05D006498 ORTHO05D006377 1.3e-56 224.6 300 53.0
TWI32G0168 Tripterygium wilfordii HOM05D006498 ORTHO05D006377 1.3e-56 224.6 293 49.8
GSVIVG01029313001 Vitis vinifera HOM05D006498 ORTHO05D006377 1.3e-56 224.6 295 55.9
CANSAT11G0487 Cannabis sativa HOM05D006498 ORTHO05D006377 1.7e-56 224.2 308 53.9
Haze_22031 Corylus avellana HOM05D006498 ORTHO05D006377 6.4e-56 222.2 400 47.0
Thecc.09G186800 Theobroma cacao HOM05D006498 ORTHO05D006377 8.4e-56 221.9 327 48.0
Prupe.1G074500 Prunus persica HOM05D006498 ORTHO05D006377 1.9e-55 220.7 319 50.5
Ciclev10008415m.g Citrus clementina HOM05D006498 ORTHO05D006377 4.2e-55 219.5 305 53.8
Duzib150G1211 Durio zibethinus HOM05D006498 ORTHO05D006377 5.4e-55 219.2 353 45.9
Nn4g25125 Nelumbo nucifera HOM05D006498 ORTHO05D006377 9.3e-55 218.4 290 50.0
SalBow3G4321 Salvia bowleyana HOM05D006498 ORTHO05D006377 1.2e-54 218.0 327 51.1
SGA_v2.0_scaffold95G28702 Striga asiatica HOM05D006498 ORTHO05D006377 1.2e-54 218.0 332 47.6
TWI34G1139 Tripterygium wilfordii HOM05D006498 ORTHO05D006377 6.0e-54 215.7 385 43.4
Gohir.D13G212600 Gossypium hirsutum HOM05D006498 ORTHO05D006377 7.9e-54 215.3 325 44.6
Gorai.013G243000 Gossypium raimondii HOM05D006498 ORTHO05D006377 7.9e-54 215.3 325 44.6
Gohir.A13G208200 Gossypium hirsutum HOM05D006498 ORTHO05D006377 1.0e-53 214.9 324 45.7
FAN12G3360 Fragaria x ananassa HOM05D006498 ORTHO05D006377 1.8e-53 214.2 305 53.1
FvH4_4g07150 Fragaria vesca HOM05D006498 ORTHO05D006377 3.9e-53 213.0 296 53.7
Aqoxy7G02850 Aquilegia oxysepala HOM05D006498 ORTHO05D006377 6.7e-53 212.2 323 47.4
Migut.N00676 Erythranthe guttata HOM05D006498 ORTHO05D006377 8.7e-53 211.8 292 52.4
FAN17G1293 Fragaria x ananassa HOM05D006498 ORTHO05D006377 9.6e-52 208.4 389 49.1
PGR142G3062 Punica granatum HOM05D006498 ORTHO05D006377 9.6e-52 208.4 447 42.5
PGR142G3622 Punica granatum HOM05D006498 ORTHO05D006377 9.6e-52 208.4 447 42.5
Actinidia23350 Actinidia chinensis HOM05D006498 ORTHO05D006377 1.3e-51 208.0 294 49.7
Potri.006G075000 Populus trichocarpa HOM05D006498 ORTHO05D006377 2.8e-51 206.8 298 52.0
Aa31LG8G16310 Aethionema arabicum HOM05D006498 ORTHO05D006377 3.6e-51 206.5 300 51.3
MSTRG.17962 Avicennia marina HOM05D006498 ORTHO05D006377 3.6e-51 206.5 363 43.8
Cfa013457 Carpinus fangiana HOM05D006498 ORTHO05D006377 3.6e-51 206.5 397 47.6
Cc01_g15950 Coffea canephora HOM05D006498 ORTHO05D006377 8.1e-51 205.3 280 50.7
MELO3C017425.2 Cucumis melo HOM05D006498 ORTHO05D006377 1.4e-50 204.5 323 48.0
Sc18g0007220 Simmondsia chinensis HOM05D006498 ORTHO05D006377 1.4e-50 204.5 308 49.4
ClCG06G013640 Citrullus lanatus HOM05D006498 ORTHO05D006377 2.4e-50 203.8 326 47.9
Sed0023189 Sechium edule HOM05D006498 ORTHO05D006377 4.0e-50 203.0 324 50.6
Nitab4.5_0005686g0030 Nicotiana tabacum HOM05D006498 ORTHO05D006377 5.3e-50 202.6 306 49.0
MD13G1239600 Malus domestica HOM05D006498 ORTHO05D006377 1.2e-49 201.4 322 46.3
unitig_60.g25575 Utricularia gibba HOM05D006498 ORTHO05D006377 2.0e-49 200.7 322 40.1
Peaxi162Scf00235g00219 Petunia axillaris HOM05D006498 ORTHO05D006377 4.5e-49 199.5 296 50.0
CAN.G844.1 Capsicum annuum HOM05D006498 ORTHO05D006377 7.6e-49 198.7 298 51.0
Oeu003665.1 Olea europaea HOM05D006498 ORTHO05D006377 1.3e-48 198.0 292 52.4
HanXRQChr07g0190541 Helianthus annuus HOM05D006498 ORTHO05D006377 1.7e-48 197.6 392 46.2
Nitab4.5_0000038g0230 Nicotiana tabacum HOM05D006498 ORTHO05D006377 1.7e-48 197.6 308 48.1
Sopen09g019810 Solanum pennellii HOM05D006498 ORTHO05D006377 1.1e-47 194.9 305 49.5
CsaV3_1G031910 Cucumis sativus L. HOM05D006498 ORTHO05D006377 3.2e-47 193.4 324 48.8
Lsat_1_v5_gn_9_16541 Lactuca sativa HOM05D006498 ORTHO05D006377 3.2e-47 193.4 343 46.9
Lj2A1114T36 Lonicera japonica HOM05D006498 ORTHO05D006377 9.3e-47 191.8 362 46.4
Sabra06G0055700 Salix brachista HOM05D006498 ORTHO05D006377 1.2e-46 191.4 372 44.9
CARHR109730 Cardamine hirsuta HOM05D006498 ORTHO05D006377 3.5e-46 189.9 297 50.5
Sp3g32630 Schrenkiella parvula HOM05D006498 ORTHO05D006377 1.0e-45 188.3 296 49.3
THA.LOC104820009 Tarenaya hassleriana HOM05D006498 ORTHO05D006377 1.0e-45 188.3 324 46.0
DCAR_004773 Daucus carota HOM05D006498 ORTHO05D006377 3.9e-45 186.4 328 43.3
Hma1.2p1_0491F.1_g164640 Hydrangea macrophylla HOM05D006498 ORTHO05D006377 8.7e-45 185.3 120 75.8
RcHm_v2.0_Chr4g0399301 Rosa chinensis HOM05D006498 ORTHO05D006377 1.1e-44 184.9 290 51.7
Atru.chr7.955 Acer truncatum HOM05D006498 ORTHO05D006377 1.3e-43 181.4 405 43.2
FAN22G0654 Fragaria x ananassa HOM05D006498 ORTHO05D006377 3.7e-43 179.9 446 41.9
Lalb_Chr12g0199631 Lupinus albus HOM05D006498 ORTHO05D006377 3.7e-43 179.9 109 81.7
Rhsim13G0054400 Rhododendron simsii HOM05D006498 ORTHO05D006377 6.2e-43 179.1 340 39.7
AT2G19270 Arabidopsis thaliana HOM05D006498 ORTHO05D006377 3.1e-42 176.8 384 41.7
Thhalv10022749m.g Eutrema salsugineum HOM05D006498 ORTHO05D006377 4.0e-42 176.4 295 49.2
AL3G49020 Arabidopsis lyrata HOM05D006498 ORTHO05D006377 9.0e-42 175.3 386 41.2
CDE05G1404 Ceratophyllum demersum HOM05D006498 ORTHO05D006377 1.2e-41 174.9 247 46.2
BcaB03g16716 Brassica carinata HOM05D006498 ORTHO05D006377 2.6e-41 173.7 296 50.0
MBI16_g05840_MAGBIO Magnolia biondii HOM05D006498 ORTHO05D006377 1.0e-40 171.8 329 41.0
PSO063G6554 Papaver somniferum HOM05D006498 ORTHO05D006377 1.3e-40 171.4 251 46.2
EL10Ac8g19141 Beta vulgaris HOM05D006498 ORTHO05D006377 1.7e-40 171.0 391 45.8
BolC7t40702H Brassica oleracea HOM05D006498 ORTHO05D006377 2.2e-40 170.6 395 43.8
PSO170G2385 Papaver somniferum HOM05D006498 ORTHO05D006377 2.2e-40 170.6 253 45.5
C07p03100 Brassica napus HOM05D006498 ORTHO05D006377 4.9e-40 169.5 395 44.3
BcaC06g36544 Brassica carinata HOM05D006498 ORTHO05D006377 1.1e-39 168.3 305 48.2
AUR62025173 Chenopodium quinoa HOM05D006498 ORTHO05D006377 1.4e-39 167.9 242 47.1
ECA247G1929 Erigeron canadensis HOM05D000109 ORTHO05D006377 1.4e-39 167.9 373 37.3
vmacro02834 Vaccinium macrocarpon HOM05D006498 ORTHO05D006377 2.5e-39 167.2 416 38.5
Carub.0003s3350 Capsella rubella HOM05D006498 ORTHO05D006377 4.2e-39 166.4 300 47.7
Lalb_Chr13g0299941 Lupinus albus HOM05D006498 ORTHO05D006377 7.1e-39 165.6 278 44.2
ATR0626G368 Amborella trichopoda HOM05D006498 ORTHO05D006377 1.0e-37 161.8 315 41.0
Lsat_1_v5_gn_3_41001 Lactuca sativa HOM05D006498 ORTHO05D006377 1.3e-37 161.4 111 73.0
BraA07t27953Z Brassica rapa HOM05D006498 ORTHO05D006377 5.1e-37 159.5 387 45.2
Lsat_1_v5_gn_7_52821 Lactuca sativa HOM05D006498 ORTHO05D006377 5.1e-37 159.5 113 71.7
A07p01520 Brassica napus HOM05D006498 ORTHO05D006377 8.7e-37 158.7 392 44.4
Zm00001eb206900 Zea mays HOM05D006498 ORTHO05D006377 2.5e-36 157.1 358 41.1
Os02g0175900 Oryza sativa ssp. japonica HOM05D006498 ORTHO05D006377 4.3e-36 156.4 205 48.8
Zm00001eb233520 Zea mays HOM05D006498 ORTHO05D006377 1.6e-35 154.5 203 48.3
Lsat_1_v5_gn_5_22180 Lactuca sativa HOM05D006498 ORTHO05D006377 2.8e-35 153.7 111 73.0
Lsat_1_v5_gn_4_158461 Lactuca sativa HOM05D006498 ORTHO05D006377 3.7e-35 153.3 121 66.1
HPP92_011644 Vanilla planifolia HOM05D006498 ORTHO05D006377 1.4e-34 151.4 298 38.9
Lsat_1_v5_gn_9_15580 Lactuca sativa HOM05D006498 ORTHO05D006377 3.4e-33 146.7 110 68.2
Cpa.g.sc2680.1 Carica papaya HOM05D006498 ORTHO05D006377 2.2e-32 144.1 261 47.5
AagrBONN_evm.TU.Sc2ySwM_228.1455 Anthoceros agrestis HOM05D006498 ORTHO05D006377 9.7e-28 128.6 247 38.9
Mapoly0001s0081 Marchantia polymorpha HOM05D006498 ORTHO05D006377 2.8e-27 127.1 177 45.2
CDE05G1079 Ceratophyllum demersum HOM05D006498 ORTHO05D006377 4.8e-27 126.3 76 81.6
Actinidia30000 Actinidia chinensis HOM05D006498 ORTHO05D006377 1.0e-24 118.6 238 43.3
SMO361G0453 Selaginella moellendorffii HOM05D006498 ORTHO05D006377 2.2e-24 117.5 249 35.7
Pp3c15_6280 Physcomitrium patens HOM05D006498 ORTHO05D006377 2.9e-24 117.1 281 36.3
COL.COLO4_06397 Corchorus olitorius HOM05D006498 ORTHO05D006377 5.5e-23 112.8 64 79.7
Solyc09g055870.2 Solanum lycopersicum HOM05D006498 ORTHO05D006377 7.2e-23 112.5 258 44.6
CBR_g12030 Chara braunii HOM05D006498 ORTHO05D006377 1.2e-22 111.7 84 64.3
QL02p046691 Quercus lobata HOM05D006498 ORTHO05D000004 1.0e-21 108.6 242 45.5
Lsat_1_v5_gn_4_108221 Lactuca sativa HOM05D006498 ORTHO05D006377 3.9e-21 106.7 76 71.1
Ah.09g231280 Amaranthus hybridus HOM05D006498 ORTHO05D006377 3.3e-20 103.6 336 41.1
Lalb_Chr13g0299961 Lupinus albus HOM05D006498 ORTHO05D006377 1.4e-18 98.2 54 87.0
QL02p046697 Quercus lobata HOM05D006498 ORTHO05D006377 2.4e-18 97.4 54 81.5
SHI03076 Sapria himalayana HOM05D006498 ORTHO05D006377 5.0e-16 89.7 54 77.8
SGA_v2.0_scaffold95G28701 Striga asiatica HOM05D006498 ORTHO05D006377 2.5e-15 87.4 63 65.1
Solyc09g055850.3 Solanum lycopersicum HOM05D006498 ORTHO05D006377 7.2e-15 85.9 53 75.5
Sed0023288 Sechium edule HOM05D006498 ORTHO05D006377 2.3e-13 80.9 241 34.0
Cre06.g278258 Chlamydomonas reinhardtii HOM05D006498 ORTHO05D006377 2.5e-07 60.8 100 39.0
PRCOL_00004634 Prasinoderma coloniale HOM05D006498 ORTHO05D006377 2.5e-07 60.8 161 30.4
MCO07G543 Micromonas commoda HOM05D006498 ORTHO05D006377 4.7e-06 56.6 175 30.9


User provided reference genes

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