Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.13G098900 Glycine max HOM05D005971 ORTHO05D007459 2.1e-45 185.3 89 100.0
Glyma.13G052500 Glycine max HOM05D005971 ORTHO05D007459 7.9e-45 183.3 89 98.9
Glyma.15G255000 Glycine max HOM05D005971 ORTHO05D007459 1.0e-23 113.2 66 84.8
Phvul.005G056400 Phaseolus vulgaris HOM05D005971 ORTHO05D007459 9.4e-22 106.7 66 78.8
VMungo1080G0173 Vigna mungo HOM05D005971 ORTHO05D007459 1.2e-21 106.3 66 77.3
Ca_03684_v3 Cicer arietinum L. HOM05D005971 ORTHO05D007459 8.8e-20 100.1 66 69.7
Lj3g0007743 Lotus japonicus HOM05D005971 ORTHO05D007459 7.0e-17 90.5 66 59.1
Psat1g011400 Pisum sativum HOM05D005971 ORTHO05D007459 9.1e-17 90.1 63 65.1
arahy.Tifrunner.gnm1.ann1.MUD8D6 Arachis hypogaea HOM05D005971 ORTHO05D007459 4.5e-16 87.8 66 63.6
Medtr2g069560 Medicago truncatula HOM05D005971 ORTHO05D007459 1.7e-15 85.9 63 63.5
TPR.G9756 Trifolium pratense HOM05D005971 ORTHO05D007459 3.8e-15 84.7 63 61.9
Lalb_Chr25g0285011 Lupinus albus HOM05D005971 ORTHO05D007459 2.1e-13 79.0 66 60.6
Cfa019419 Carpinus fangiana HOM05D005971 ORTHO05D007459 1.3e-10 69.7 64 48.4
Dinv19623 Davidia involucrata HOM05D005971 ORTHO05D007459 1.1e-09 66.6 66 48.5
FAN11G3334 Fragaria x ananassa HOM05D005971 ORTHO05D007459 5.4e-09 64.3 66 45.5
FAN16G0465 Fragaria x ananassa HOM05D005971 ORTHO05D007459 5.4e-09 64.3 66 45.5
FAN21G1476 Fragaria x ananassa HOM05D005971 ORTHO05D007459 5.4e-09 64.3 66 45.5
FvH4_3g15860 Fragaria vesca HOM05D005971 ORTHO05D007459 7.0e-09 63.9 66 45.5
QL04p073974 Quercus lobata HOM05D005971 ORTHO05D007459 7.0e-09 63.9 66 42.4
RcHm_v2.0_Chr5g0026671 Rosa chinensis HOM05D005971 ORTHO05D007459 2.7e-08 62.0 66 45.5
MD05G1219300 Malus domestica HOM05D005971 ORTHO05D007459 1.0e-07 60.1 66 43.9
Prupe.4G140600 Prunus persica HOM05D005971 ORTHO05D007459 1.0e-07 60.1 66 43.9
Sabra16G0310100 Salix brachista HOM05D005971 ORTHO05D007459 2.9e-07 58.5 63 44.4
Actinidia35435 Actinidia chinensis HOM05D005971 ORTHO05D007459 5.0e-07 57.8 66 42.4
Potri.001G457550 Populus trichocarpa HOM05D005971 ORTHO05D007459 5.0e-07 57.8 63 44.4
Manes.14G015836 Manihot esculenta HOM05D005971 ORTHO05D007459 2.5e-06 55.5 66 40.9
Gorai.013G178300 Gossypium raimondii HOM05D005971 ORTHO05D007459 3.3e-06 55.1 66 47.0
TWI39G0032 Tripterygium wilfordii HOM05D005971 ORTHO05D007459 3.3e-06 55.1 66 42.4
CARHR003720 Cardamine hirsuta HOM05D005971 ORTHO05D007459 7.3e-06 53.9 66 45.5
Lj1C905G3 Lonicera japonica HOM05D005971 ORTHO05D007459 7.3e-06 53.9 66 43.9
Thecc.07G154200 Theobroma cacao HOM05D005971 ORTHO05D007459 7.3e-06 53.9 66 42.4


User provided reference genes

Program Settings