Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.13G084500 Glycine max HOM05D007182 ORTHO05D008919 8.0e-112 407.1 210 100.0
Glyma.14G166200 Glycine max HOM05D007182 ORTHO05D008919 1.3e-98 363.2 210 91.4
Phvul.008G168400 Phaseolus vulgaris HOM05D007182 ORTHO05D008919 2.7e-91 339.0 210 83.3
VMungo0647G1564 Vigna mungo HOM05D007182 ORTHO05D008919 2.3e-74 282.7 213 75.1
Lalb_Chr10g0102011 Lupinus albus HOM05D007182 ORTHO05D008919 1.3e-61 240.4 214 64.5
Lj1g0021904 Lotus japonicus HOM05D007182 ORTHO05D008919 2.9e-53 212.6 278 52.9
TPR.G30417 Trifolium pratense HOM05D007182 ORTHO05D008919 1.4e-52 210.3 216 60.6
Duzib041G0557 Durio zibethinus HOM05D007182 ORTHO05D008919 3.1e-47 192.6 203 53.2
Lalb_Chr08g0241731 Lupinus albus HOM05D007182 ORTHO05D008919 5.3e-47 191.8 205 58.0
CiPaw.06G024500 Carya illinoinensis HOM05D007182 ORTHO05D008919 1.5e-46 190.3 215 49.8
Manes.02G158600 Manihot esculenta HOM05D007182 ORTHO05D008919 9.9e-46 187.6 201 55.2
CiPaw.05G229300 Carya illinoinensis HOM05D007182 ORTHO05D008919 1.7e-45 186.8 209 56.5
Glyma.04G253900 Glycine max HOM05D007182 ORTHO05D008919 2.9e-45 186.0 212 56.1
Duzib093G0280 Durio zibethinus HOM05D007182 ORTHO05D008919 1.4e-44 183.7 197 53.8
Potri.002G089650 Populus trichocarpa HOM05D007182 ORTHO05D008919 1.4e-44 183.7 208 51.9
Glyma.06G108400 Glycine max HOM05D007182 ORTHO05D008919 1.2e-43 180.6 213 54.5
Duzib116G0693 Durio zibethinus HOM05D007182 ORTHO05D008919 1.6e-43 180.3 198 53.5
Lj1g0017374 Lotus japonicus HOM05D007182 ORTHO05D008919 7.9e-43 177.9 214 52.3
Lalb_Chr11g0065671 Lupinus albus HOM05D007182 ORTHO05D008919 6.7e-42 174.9 220 50.9
Thecc.08G116300 Theobroma cacao HOM05D007182 ORTHO05D008919 2.5e-41 172.9 206 51.5
Phvul.009G025900 Phaseolus vulgaris HOM05D007182 ORTHO05D008919 5.6e-41 171.8 213 52.1
Manes.18G072600 Manihot esculenta HOM05D007182 ORTHO05D008919 3.7e-40 169.1 200 54.5
Psat5g134040 Pisum sativum HOM05D007182 ORTHO05D008919 3.7e-40 169.1 196 55.6
COL.COLO4_21819 Corchorus olitorius HOM05D007182 ORTHO05D008919 4.8e-40 168.7 206 50.5
Medtr3g073330 Medicago truncatula HOM05D007182 ORTHO05D008919 4.8e-40 168.7 198 56.1
Sabra05G0129100 Salix brachista HOM05D007182 ORTHO05D008919 6.2e-40 168.3 190 50.5
Medtr5g060450 Medicago truncatula HOM05D007182 ORTHO05D008919 8.1e-40 167.9 173 57.8
RcHm_v2.0_Chr7g0240831 Rosa chinensis HOM05D007182 ORTHO05D008919 1.4e-39 167.2 195 52.3
TWI36G1401 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 4.5e-38 162.2 215 47.4
Gorai.010G046800 Gossypium raimondii HOM05D007182 ORTHO05D008919 2.2e-37 159.8 206 49.0
Potri.005G171600 Populus trichocarpa HOM05D007182 ORTHO05D008919 2.2e-37 159.8 194 51.5
Gohir.D06G041600 Gossypium hirsutum HOM05D007182 ORTHO05D008919 3.8e-37 159.1 206 49.0
Gohir.A06G040600 Gossypium hirsutum HOM05D007182 ORTHO05D008919 1.1e-36 157.5 207 49.3
TPR.G32946 Trifolium pratense HOM05D007182 ORTHO05D008919 1.4e-36 157.1 192 55.2
VMungo1309G0514 Vigna mungo HOM05D007182 ORTHO05D008919 1.9e-36 156.8 187 51.3
MELO3C022789.2 Cucumis melo HOM05D007182 ORTHO05D008919 1.6e-35 153.7 215 46.0
Atru.chr13.1314 Acer truncatum HOM05D007182 ORTHO05D008919 3.5e-35 152.5 211 48.3
Atru.chr13.1358 Acer truncatum HOM05D007182 ORTHO05D008919 3.5e-35 152.5 211 48.3
Sabra02G0070600 Salix brachista HOM05D007182 ORTHO05D008919 4.6e-35 152.1 171 55.0
ClCG03G009070 Citrullus lanatus HOM05D007182 ORTHO05D008919 1.3e-34 150.6 214 43.9
Gorai.009G242300 Gossypium raimondii HOM05D007182 ORTHO05D008919 1.1e-33 147.5 204 48.0
FAN13G2785 Fragaria x ananassa HOM05D007182 ORTHO05D008919 1.5e-33 147.1 198 48.0
TWI56G1442 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 1.5e-33 147.1 190 47.9
Eucgr.F03740 Eucalyptus grandis HOM05D007182 ORTHO05D008919 2.5e-33 146.4 207 45.4
Gohir.D05G234100 Gossypium hirsutum HOM05D007182 ORTHO05D008919 3.3e-33 146.0 204 48.5
FvH4_5g38830 Fragaria vesca HOM05D007182 ORTHO05D008919 7.4e-33 144.8 197 48.2
FAN08G1433 Fragaria x ananassa HOM05D007182 ORTHO05D008919 9.6e-33 144.4 197 47.7
Hma1.2p1_0221F.1_g093130 Hydrangea macrophylla HOM05D007182 ORTHO05D008919 9.6e-33 144.4 198 45.5
FAN04G3126 Fragaria x ananassa HOM05D007182 ORTHO05D008919 1.3e-32 144.1 198 49.0
FAN18G1758 Fragaria x ananassa HOM05D007182 ORTHO05D008919 2.8e-32 142.9 197 47.7
Sed0021526 Sechium edule HOM05D007182 ORTHO05D008919 8.2e-32 141.4 222 43.2
FAN04G2762 Fragaria x ananassa HOM05D007182 ORTHO05D008919 3.1e-31 139.4 195 49.7
Gohir.A05G231800 Gossypium hirsutum HOM05D007182 ORTHO05D008919 5.3e-31 138.7 204 47.1
Ciclev10002385m.g Citrus clementina HOM05D007182 ORTHO05D008919 5.8e-30 135.2 237 40.9
TWI12G0744 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 5.8e-30 135.2 207 43.0
Dinv26722 Davidia involucrata HOM05D007182 ORTHO05D008919 1.3e-29 134.0 166 48.2
CsaV3_5G023550 Cucumis sativus L. HOM05D007182 ORTHO05D008919 1.1e-28 131.0 189 46.0
PGR042G1174 Punica granatum HOM05D007182 ORTHO05D008919 4.2e-28 129.0 215 41.4
Thhalv10004990m.g Eutrema salsugineum HOM05D007182 ORTHO05D008919 7.9e-27 124.8 191 45.0
Cc00_g10670 Coffea canephora HOM05D007182 ORTHO05D008919 1.0e-26 124.4 207 41.1
AT1G36940 Arabidopsis thaliana HOM05D007182 ORTHO05D008919 1.8e-26 123.6 182 42.9
AL1G51080 Arabidopsis lyrata HOM05D007182 ORTHO05D008919 2.3e-26 123.2 185 44.3
Prupe.1G506300 Prunus persica HOM05D007182 ORTHO05D008919 2.3e-26 123.2 223 43.5
Sopen11g008530 Solanum pennellii HOM05D007182 ORTHO05D008919 5.7e-25 118.6 204 41.2
Rhsim06G0109300 Rhododendron simsii HOM05D007182 ORTHO05D008919 8.2e-24 114.8 181 43.1
Dinv27387 Davidia involucrata HOM05D007182 ORTHO05D008919 1.1e-23 114.4 218 39.0
Solyc11g013500.1 Solanum lycopersicum HOM05D007182 ORTHO05D008919 1.4e-23 114.0 213 39.4
A05p23400 Brassica napus HOM05D007182 ORTHO05D008919 3.1e-23 112.8 185 43.8
BraA05t21203Z Brassica rapa HOM05D007182 ORTHO05D008919 3.1e-23 112.8 185 43.8
Carub.0001s3387 Capsella rubella HOM05D007182 ORTHO05D008919 3.1e-23 112.8 183 42.1
THA.LOC104806807 Tarenaya hassleriana HOM05D007182 ORTHO05D008919 4.1e-23 112.5 192 43.2
BcaB03g13641 Brassica carinata HOM05D007182 ORTHO05D008919 6.9e-23 111.7 185 42.2
Oeu017862.1 Olea europaea HOM05D007182 ORTHO05D008919 9.0e-23 111.3 198 36.4
PGSC0003DMG400027800 Solanum tuberosum HOM05D007182 ORTHO05D008919 5.9e-22 108.6 207 41.1
THA.LOC104813133 Tarenaya hassleriana HOM05D007182 ORTHO05D008919 1.0e-21 107.8 194 41.2
CARHR034810 Cardamine hirsuta HOM05D007182 ORTHO05D008919 1.3e-21 107.5 197 40.1
Migut.N03323 Erythranthe guttata HOM05D007182 ORTHO05D008919 2.2e-21 106.7 187 39.6
DCAR_023125 Daucus carota HOM05D007182 ORTHO05D008919 1.1e-20 104.4 178 40.4
Sc23g0000930 Simmondsia chinensis HOM05D007182 ORTHO05D008919 1.1e-20 104.4 212 37.3
Aa31LG6G9060 Aethionema arabicum HOM05D007182 ORTHO05D008919 1.4e-20 104.0 181 40.9
Nitab4.5_0009801g0010 Nicotiana tabacum HOM05D007182 ORTHO05D008919 3.2e-20 102.8 165 43.0
Oeu043797.1 Olea europaea HOM05D000316 ORTHO05D008919 1.2e-19 100.9 181 40.9
Oeu043798.1 Olea europaea HOM05D000316 ORTHO05D008919 1.2e-19 100.9 181 40.9
TAR197G0002 Trochodendron aralioides HOM05D007182 ORTHO05D008919 4.6e-19 99.0 198 37.9
Peaxi162Scf00476g00051 Petunia axillaris HOM05D007182 ORTHO05D008919 7.9e-19 98.2 202 36.1
TAR628G0731 Trochodendron aralioides HOM05D007182 ORTHO05D008919 1.8e-18 97.1 187 39.0
Sp1g31070 Schrenkiella parvula HOM05D007182 ORTHO05D008919 6.7e-18 95.1 204 36.8
TAR127G0001 Trochodendron aralioides HOM05D007182 ORTHO05D008919 1.5e-17 94.0 185 38.4
Nn1g08539 Nelumbo nucifera HOM05D007182 ORTHO05D008919 7.4e-17 91.7 205 34.6
EL10Ac1g00042 Beta vulgaris HOM05D007182 ORTHO05D008919 9.7e-17 91.3 237 35.4
SGA_v2.0_scaffold28G12033 Striga asiatica HOM05D007182 ORTHO05D008919 9.1e-15 84.7 192 33.9
Nn5g27955 Nelumbo nucifera HOM05D007182 ORTHO05D008919 4.5e-14 82.4 189 34.9
DCAR_014791 Daucus carota HOM05D007182 ORTHO05D008919 1.7e-13 80.5 178 35.4
Lsat_1_v5_gn_1_25160 Lactuca sativa HOM05D007182 ORTHO05D008919 1.1e-12 77.8 206 33.0
Lsat_1_v5_gn_4_133360 Lactuca sativa HOM05D007182 ORTHO05D008919 9.4e-12 74.7 192 32.8
SGA_v2.0_scaffold118G32440 Striga asiatica HOM05D007182 ORTHO05D008919 3.6e-11 72.8 189 33.3
Nitab4.5_0000051g0140 Nicotiana tabacum HOM05D007182 ORTHO05D008919 2.3e-10 70.1 128 40.6
Ah.05g172700 Amaranthus hybridus HOM05D007182 ORTHO05D008919 1.5e-09 67.4 218 29.8
MSTRG.1489 Avicennia marina HOM05D007182 ORTHO05D008919 5.7e-09 65.5 156 35.3
Cpa.g.sc828.3 Carica papaya HOM05D007182 ORTHO05D008919 3.7e-08 62.8 47 59.6
SGA_v2.0_scaffold24G10509 Striga asiatica HOM05D007182 ORTHO05D008919 1.1e-07 61.2 194 30.9
AUR62004689 Chenopodium quinoa HOM05D007182 ORTHO05D008919 1.8e-07 60.5 138 35.5
DCAR_014280 Daucus carota HOM05D007182 ORTHO05D008919 1.8e-07 60.5 172 32.6
ECA247G3744 Erigeron canadensis HOM05D007182 ORTHO05D008919 3.1e-07 59.7 178 32.6
SalBow7G0102 Salvia bowleyana HOM05D007182 ORTHO05D008919 3.5e-06 56.2 178 29.8
SalBow7G3005 Salvia bowleyana HOM05D007182 ORTHO05D008919 3.5e-06 56.2 178 29.8
MBI06_g01043_MAGBIO Magnolia biondii HOM05D007182 ORTHO05D008919 5.9e-06 55.5 192 32.3


User provided reference genes

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