Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.13G082600 Glycine max HOM05D011727 ORTHO05D004912 1.1e-54 216.5 119 100.0
Glyma.14G163600 Glycine max HOM05D011727 ORTHO05D004912 3.1e-36 155.2 117 71.8
VMungo0647G2151 Vigna mungo HOM05D011727 ORTHO05D004912 3.1e-20 102.1 117 49.6
Phvul.008G166200 Phaseolus vulgaris HOM05D011727 ORTHO05D004912 5.3e-20 101.3 109 52.3
Glyma.13G082350 Glycine max HOM05D011727 ORTHO05D004912 2.9e-18 95.5 121 47.9
Phvul.008G166300 Phaseolus vulgaris HOM05D011727 ORTHO05D004912 3.6e-16 88.6 119 48.7
Medtr8g468960 Medicago truncatula HOM05D011727 ORTHO05D004912 1.3e-13 80.1 109 46.8
Medtr8g468940 Medicago truncatula HOM05D011727 ORTHO05D004912 1.4e-12 76.6 117 45.3
Lj1g0009560 Lotus japonicus HOM05D011727 ORTHO05D004912 2.6e-11 72.4 112 47.3
Phvul.008G166400 Phaseolus vulgaris HOM05D011727 ORTHO05D004912 2.6e-11 72.4 76 53.9
Haze_12865 Corylus avellana HOM05D007398 ORTHO05D004912 5.0e-10 68.2 97 39.2
RcHm_v2.0_Chr5g0002951 Rosa chinensis HOM05D011727 ORTHO05D004912 5.0e-10 68.2 108 45.4
FAN25G2989 Fragaria x ananassa HOM05D011727 ORTHO05D004912 1.1e-09 67.0 119 41.2
Psat5g264000 Pisum sativum HOM05D007398 ORTHO05D004912 1.4e-09 66.6 101 43.6
Migut.H01572 Erythranthe guttata HOM05D011575 ORTHO05D004912 4.2e-09 65.1 103 40.8
Ca_22861_v3 Cicer arietinum L. HOM05D011727 ORTHO05D004912 7.2e-09 64.3 117 42.7
Cfa014400 Carpinus fangiana HOM05D007398 ORTHO05D004912 2.7e-08 62.4 102 40.2
Ca_01601_v3 Cicer arietinum L. HOM05D007398 ORTHO05D004912 2.7e-08 62.4 113 40.7
Solyc02g080550.1 Solanum lycopersicum HOM05D011575 ORTHO05D004912 2.7e-08 62.4 103 38.8
FvH4_3g02050 Fragaria vesca HOM05D011727 ORTHO05D004912 3.6e-08 62.0 107 41.1
FAN21G2105 Fragaria x ananassa HOM05D011727 ORTHO05D004912 3.6e-08 62.0 107 41.1
CiPaw.03G160000 Carya illinoinensis HOM05D007398 ORTHO05D004912 6.1e-08 61.2 103 37.9
PGSC0003DMG400016452 Solanum tuberosum HOM05D011575 ORTHO05D004912 6.1e-08 61.2 100 39.0
Sopen02g025250 Solanum pennellii HOM05D011575 ORTHO05D004912 1.4e-07 60.1 100 38.0
SGA_v2.0_scaffold4G01914 Striga asiatica HOM05D011575 ORTHO05D004912 1.8e-07 59.7 99 41.4
Lalb_Chr19g0135871 Lupinus albus HOM05D007398 ORTHO05D004912 2.3e-07 59.3 100 44.0
QL07p015665 Quercus lobata HOM05D007398 ORTHO05D004912 3.9e-07 58.5 101 40.6
QL05p073125 Quercus lobata HOM05D007398 ORTHO05D004912 5.1e-07 58.2 109 37.6
QL08p033081 Quercus lobata HOM05D007398 ORTHO05D004912 5.1e-07 58.2 103 41.7
Migut.M01320 Erythranthe guttata HOM05D011575 ORTHO05D004912 8.8e-07 57.4 113 38.1
Medtr2g088320 Medicago truncatula HOM05D007398 ORTHO05D004912 8.8e-07 57.4 100 45.0
QL05p073115 Quercus lobata HOM05D007398 ORTHO05D004912 8.8e-07 57.4 116 37.9
TPR.G4189 Trifolium pratense HOM05D007398 ORTHO05D004912 8.8e-07 57.4 100 43.0
FAN09G1954 Fragaria x ananassa HOM05D007398 ORTHO05D004912 2.0e-06 56.2 98 44.9
PGSC0003DMG400016451 Solanum tuberosum HOM05D011575 ORTHO05D004912 2.0e-06 56.2 102 38.2
Sopen02g025260 Solanum pennellii HOM05D011575 ORTHO05D004912 4.4e-06 55.1 102 38.2
Aqoxy1G02145 Aquilegia oxysepala HOM05D007398 ORTHO05D004912 5.7e-06 54.7 104 45.2
AUR62012711 Chenopodium quinoa HOM05D011727 ORTHO05D004912 5.7e-06 54.7 104 37.5
FAN02G4350 Fragaria x ananassa HOM05D007398 ORTHO05D004912 5.7e-06 54.7 97 45.4
FAN14G0586 Fragaria x ananassa HOM05D007398 ORTHO05D004912 5.7e-06 54.7 98 44.9
Solyc02g080560.1 Solanum lycopersicum HOM05D011575 ORTHO05D004912 5.7e-06 54.7 102 37.3
RcHm_v2.0_Chr2g0159281 Rosa chinensis HOM05D007398 ORTHO05D004912 7.4e-06 54.3 104 42.3
SGA_v2.0_scaffold7G03838 Striga asiatica HOM05D011575 ORTHO05D004912 7.4e-06 54.3 99 38.4
TWI75G1275 Tripterygium wilfordii HOM05D007398 ORTHO05D004912 7.4e-06 54.3 100 38.0
arahy.Tifrunner.gnm1.ann1.TIC55L Arachis hypogaea HOM05D007398 ORTHO05D004912 9.7e-06 53.9 103 39.8


User provided reference genes

Program Settings