Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.13G082350 Glycine max HOM05D011727 ORTHO05D004912 3.0e-55 218.4 119 100.0
VMungo0647G2151 Vigna mungo HOM05D011727 ORTHO05D004912 2.3e-31 139.0 117 65.0
Phvul.008G166200 Phaseolus vulgaris HOM05D011727 ORTHO05D004912 7.2e-25 117.5 117 59.0
Glyma.14G163600 Glycine max HOM05D011727 ORTHO05D004912 3.0e-23 112.1 112 53.6
Phvul.008G166300 Phaseolus vulgaris HOM05D011727 ORTHO05D004912 4.5e-19 98.2 109 56.0
Lj1g0009560 Lotus japonicus HOM05D011727 ORTHO05D004912 1.7e-18 96.3 120 50.8
Glyma.13G082600 Glycine max HOM05D011727 ORTHO05D004912 2.9e-18 95.5 121 47.9
Medtr8g468960 Medicago truncatula HOM05D011727 ORTHO05D004912 6.1e-16 87.8 117 55.6
Phvul.008G166400 Phaseolus vulgaris HOM05D011727 ORTHO05D004912 7.9e-16 87.4 102 53.9
Ca_22861_v3 Cicer arietinum L. HOM05D011727 ORTHO05D004912 2.2e-13 79.3 122 47.5
Medtr8g468940 Medicago truncatula HOM05D011727 ORTHO05D004912 2.8e-13 79.0 119 52.9
QL05p073125 Quercus lobata HOM05D007398 ORTHO05D004912 6.9e-12 74.3 97 47.4
QL05p073115 Quercus lobata HOM05D007398 ORTHO05D004912 1.5e-11 73.2 97 47.4
RcHm_v2.0_Chr5g0002951 Rosa chinensis HOM05D011727 ORTHO05D004912 3.4e-11 72.0 109 43.1
FAN25G2989 Fragaria x ananassa HOM05D011727 ORTHO05D004912 2.2e-10 69.3 109 41.3
FAN21G2105 Fragaria x ananassa HOM05D011727 ORTHO05D004912 2.5e-09 65.9 104 39.4
FvH4_3g02050 Fragaria vesca HOM05D011727 ORTHO05D004912 1.2e-08 63.5 104 38.5
Migut.H01572 Erythranthe guttata HOM05D011575 ORTHO05D004912 4.7e-08 61.6 104 40.4
COL.COLO4_27711 Corchorus olitorius HOM05D007398 ORTHO05D004912 6.1e-08 61.2 85 38.8
SGA_v2.0_scaffold4G01914 Striga asiatica HOM05D011575 ORTHO05D004912 6.1e-08 61.2 112 38.4
Migut.M01320 Erythranthe guttata HOM05D011575 ORTHO05D004912 1.0e-07 60.5 105 38.1
MD17G1096900 Malus domestica HOM05D007398 ORTHO05D004912 3.0e-07 58.9 94 41.5
PGSC0003DMG400016451 Solanum tuberosum HOM05D011575 ORTHO05D004912 3.0e-07 58.9 107 36.4
Haze_06802 Corylus avellana HOM05D061810 ORTHO05D004912 3.9e-07 58.5 111 36.0
SGA_v2.0_scaffold7G03838 Striga asiatica HOM05D011575 ORTHO05D004912 3.9e-07 58.5 93 38.7
MD09G1108900 Malus domestica HOM05D007398 ORTHO05D004912 6.7e-07 57.8 94 40.4
Prupe.3G217200 Prunus persica HOM05D007398 ORTHO05D004912 6.7e-07 57.8 94 39.4
Thecc.02G314700 Theobroma cacao HOM05D007398 ORTHO05D004912 6.7e-07 57.8 85 38.8
unitig_744.g24521 Utricularia gibba HOM05D011575 ORTHO05D004912 6.7e-07 57.8 91 41.8
MSTRG.7209 Avicennia marina HOM05D011575 ORTHO05D004912 8.8e-07 57.4 111 37.8
Lalb_Chr24g0393181 Lupinus albus HOM05D007398 ORTHO05D004912 8.8e-07 57.4 89 41.6
Oeu041920.1 Olea europaea HOM05D007398 ORTHO05D004912 8.8e-07 57.4 97 41.2
Duzib251G0280 Durio zibethinus HOM05D007398 ORTHO05D004912 1.1e-06 57.0 86 39.5
PGSC0003DMG400016452 Solanum tuberosum HOM05D011575 ORTHO05D004912 1.1e-06 57.0 94 37.2
CiPaw.03G160000 Carya illinoinensis HOM05D007398 ORTHO05D004912 1.5e-06 56.6 104 39.4
Haze_12865 Corylus avellana HOM05D007398 ORTHO05D004912 1.5e-06 56.6 108 37.0
QL08p033081 Quercus lobata HOM05D007398 ORTHO05D004912 2.0e-06 56.2 100 37.0
SalBow8G3401 Salvia bowleyana HOM05D011575 ORTHO05D004912 2.0e-06 56.2 113 36.3
Solyc02g080560.1 Solanum lycopersicum HOM05D011575 ORTHO05D004912 2.6e-06 55.8 107 34.6
Psat5g264000 Pisum sativum HOM05D007398 ORTHO05D004912 3.3e-06 55.5 96 36.5
Sopen02g025260 Solanum pennellii HOM05D011575 ORTHO05D004912 3.3e-06 55.5 107 34.6
Lalb_Chr19g0135871 Lupinus albus HOM05D007398 ORTHO05D004912 5.7e-06 54.7 91 38.5
unitig_0.g942 Utricularia gibba HOM05D011575 ORTHO05D004912 5.7e-06 54.7 91 38.5
QL07p015665 Quercus lobata HOM05D007398 ORTHO05D004912 7.4e-06 54.3 98 38.8


User provided reference genes

Program Settings