Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.13G075600 Glycine max HOM05D006644 ORTHO05D008285 1.1e-170 603.2 304 100.0
Phvul.011G156400 Phaseolus vulgaris HOM05D006644 ORTHO05D008285 1.5e-159 566.2 304 93.4
VMungo0720G3176 Vigna mungo HOM05D006644 ORTHO05D008285 2.5e-159 565.5 304 93.1
Lj2g0023084 Lotus japonicus HOM05D006644 ORTHO05D008285 1.1e-154 550.1 304 90.1
Ca_06699_v3 Cicer arietinum L. HOM05D006644 ORTHO05D008285 7.1e-154 547.4 304 89.8
Medtr5g012060 Medicago truncatula HOM05D006644 ORTHO05D008285 1.3e-152 543.1 304 89.8
Psat2g178760 Pisum sativum HOM05D006644 ORTHO05D008285 1.3e-150 536.6 304 87.8
Lalb_Chr05g0214591 Lupinus albus HOM05D006644 ORTHO05D008285 2.8e-150 535.4 304 87.5
TPR.G25884 Trifolium pratense HOM05D006644 ORTHO05D008285 2.8e-150 535.4 304 88.2
arahy.Tifrunner.gnm1.ann1.FSA67V Arachis hypogaea HOM05D006644 ORTHO05D008285 2.4e-141 505.8 304 83.9
arahy.Tifrunner.gnm1.ann1.TVS5XD Arachis hypogaea HOM05D006644 ORTHO05D008285 2.4e-141 505.8 304 83.9
Prupe.5G076400 Prunus persica HOM05D006644 ORTHO05D008285 1.9e-138 496.1 304 79.9
QL07p036208 Quercus lobata HOM05D006644 ORTHO05D008285 1.9e-138 496.1 303 80.9
TWI81G0884 Tripterygium wilfordii HOM05D006644 ORTHO05D008285 1.2e-137 493.4 304 79.9
Cfa012781 Carpinus fangiana HOM05D006644 ORTHO05D008285 1.6e-137 493.0 304 80.6
Haze_08586 Corylus avellana HOM05D006644 ORTHO05D008285 1.6e-137 493.0 304 80.9
ClCG10G003030 Citrullus lanatus HOM05D006644 ORTHO05D008285 3.6e-137 491.9 304 79.9
CiPaw.12G106200 Carya illinoinensis HOM05D006644 ORTHO05D008285 4.7e-137 491.5 304 80.6
Manes.02G035200 Manihot esculenta HOM05D006644 ORTHO05D008285 4.7e-137 491.5 299 80.6
CsaV3_3G003070 Cucumis sativus L. HOM05D006644 ORTHO05D008285 3.9e-136 488.4 304 79.6
MD04G1082000 Malus domestica HOM05D006644 ORTHO05D008285 3.9e-136 488.4 304 79.6
Gohir.A03G014500 Gossypium hirsutum HOM05D006644 ORTHO05D008285 5.1e-136 488.0 299 80.9
Atru.chr12.1357 Acer truncatum HOM05D006644 ORTHO05D008285 6.7e-136 487.6 304 79.3
MELO3C013973.2 Cucumis melo HOM05D006644 ORTHO05D008285 1.1e-135 486.9 304 79.3
TAR629G2969 Trochodendron aralioides HOM05D006644 ORTHO05D008285 2.6e-135 485.7 304 78.6
Sed0006360 Sechium edule HOM05D006644 ORTHO05D008285 3.3e-135 485.3 304 78.6
Cpa.g.sc29.104 Carica papaya HOM05D006644 ORTHO05D008285 4.4e-135 485.0 304 79.3
Duzib068G0588 Durio zibethinus HOM05D006644 ORTHO05D008285 2.2e-134 482.6 304 79.3
Gorai.003G168800 Gossypium raimondii HOM05D006644 ORTHO05D008285 3.7e-134 481.9 300 80.0
Gohir.D03G160300 Gossypium hirsutum HOM05D006644 ORTHO05D008285 4.8e-134 481.5 300 79.3
Aqoxy2G01551 Aquilegia oxysepala HOM05D006644 ORTHO05D008285 1.1e-133 480.3 304 77.3
FAN08G3361 Fragaria x ananassa HOM05D006644 ORTHO05D008285 9.1e-133 477.2 304 78.3
Sabra01G0092400 Salix brachista HOM05D006644 ORTHO05D008285 9.1e-133 477.2 304 78.3
DCAR_021556 Daucus carota HOM05D006644 ORTHO05D008285 1.2e-132 476.9 304 77.3
Thecc.03G258000 Theobroma cacao HOM05D006644 ORTHO05D008285 1.2e-132 476.9 304 77.6
Eucgr.E00462 Eucalyptus grandis HOM05D006644 ORTHO05D008285 1.5e-132 476.5 304 76.6
FvH4_5g00371 Fragaria vesca HOM05D006644 ORTHO05D008285 1.5e-132 476.5 304 78.3
MSTRG.22191 Avicennia marina HOM05D006644 ORTHO05D008285 2.0e-132 476.1 304 75.7
RcHm_v2.0_Chr7g0202141 Rosa chinensis HOM05D006644 ORTHO05D008285 2.0e-132 476.1 304 78.3
FAN04G2033 Fragaria x ananassa HOM05D006644 ORTHO05D008285 1.0e-131 473.8 304 77.6
Potri.001G119700 Populus trichocarpa HOM05D006644 ORTHO05D008285 6.5e-131 471.1 304 77.0
Hma1.2p1_0123F.1_g057970 Hydrangea macrophylla HOM05D006644 ORTHO05D008285 1.1e-130 470.3 297 76.8
Nitab4.5_0004059g0010 Nicotiana tabacum HOM05D006644 ORTHO05D008285 1.1e-130 470.3 304 75.3
CSS0029694 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 5.5e-130 468.0 304 76.6
Ciclev10024149m.g Citrus clementina HOM05D006644 ORTHO05D008285 7.2e-130 467.6 299 76.3
CSS0031485 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 9.4e-130 467.2 302 76.8
CANSAT21G2263 Cannabis sativa HOM05D006644 ORTHO05D008285 1.6e-129 466.5 302 75.2
Nitab4.5_0001707g0070 Nicotiana tabacum HOM05D006644 ORTHO05D008285 1.8e-128 463.0 304 74.3
Oeu046413.1 Olea europaea HOM05D006644 ORTHO05D008285 1.8e-128 463.0 304 75.0
Oeu046415.1 Olea europaea HOM05D006644 ORTHO05D008285 1.8e-128 463.0 304 75.0
Hund11575 Selenicereus undatus HOM05D006644 ORTHO05D008285 1.8e-128 463.0 304 74.3
PGSC0003DMG400012507 Solanum tuberosum HOM05D006644 ORTHO05D008285 3.0e-128 462.2 304 74.7
Sopen08g003400 Solanum pennellii HOM05D006644 ORTHO05D008285 8.8e-128 460.7 304 74.0
Cc08_g13030 Coffea canephora HOM05D006644 ORTHO05D008285 1.1e-127 460.3 304 73.7
Lj3P740T25 Lonicera japonica HOM05D006644 ORTHO05D008285 2.6e-127 459.1 304 74.0
COL.COLO4_37229 Corchorus olitorius HOM05D000927 ORTHO05D000850 7.4e-127 457.6 284 80.3
CAN.G1394.30 Capsicum annuum HOM05D006644 ORTHO05D008285 1.3e-126 456.8 304 73.4
Solyc08g007440.2 Solanum lycopersicum HOM05D006644 ORTHO05D008285 1.3e-126 456.8 304 73.7
Nn4g25799 Nelumbo nucifera HOM05D006644 ORTHO05D008285 9.1e-125 450.7 304 73.7
Sc01g0009310 Simmondsia chinensis HOM05D006644 ORTHO05D008285 2.0e-124 449.5 304 73.0
Migut.E00967 Erythranthe guttata HOM05D006644 ORTHO05D008285 3.5e-124 448.7 304 73.4
CARHR049110 Cardamine hirsuta HOM05D006644 ORTHO05D008285 2.2e-123 446.0 306 74.2
MBI05_g39054_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 2.2e-123 446.0 302 73.5
ECA232G2550 Erigeron canadensis HOM05D006644 ORTHO05D008285 8.5e-123 444.1 304 72.7
Lsat_1_v5_gn_4_110420 Lactuca sativa HOM05D006644 ORTHO05D008285 8.5e-123 444.1 300 72.7
HanXRQChr16g0502401 Helianthus annuus HOM05D006644 ORTHO05D008285 1.9e-122 443.0 304 72.4
BcaC04g22441 Brassica carinata HOM05D006644 ORTHO05D008285 2.5e-122 442.6 306 71.2
BolC9t54841H Brassica oleracea HOM05D006644 ORTHO05D008285 2.5e-122 442.6 306 71.2
C09p19300 Brassica napus HOM05D006644 ORTHO05D008285 3.2e-122 442.2 306 71.2
Migut.E01682 Erythranthe guttata HOM05D006644 ORTHO05D008285 4.2e-122 441.8 304 72.7
Aa31LG2G270 Aethionema arabicum HOM05D006644 ORTHO05D008285 5.5e-122 441.4 306 72.2
BcaB07g31354 Brassica carinata HOM05D006644 ORTHO05D008285 5.5e-122 441.4 306 70.9
unitig_0.g533 Utricularia gibba HOM05D006644 ORTHO05D008285 5.5e-122 441.4 304 71.1
THA.LOC104818444 Tarenaya hassleriana HOM05D006644 ORTHO05D008285 2.1e-121 439.5 306 71.9
A09p16050 Brassica napus HOM05D006644 ORTHO05D008285 2.7e-121 439.1 306 70.6
BraA09t37241Z Brassica rapa HOM05D006644 ORTHO05D008285 3.6e-121 438.7 306 70.6
Thhalv10023606m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 3.6e-121 438.7 306 72.5
AT1G62730 Arabidopsis thaliana HOM05D006644 ORTHO05D008285 1.0e-120 437.2 306 73.2
Sp2g01910 Schrenkiella parvula HOM05D006644 ORTHO05D008285 6.8e-120 434.5 306 71.2
Actinidia05183 Actinidia chinensis HOM05D006644 ORTHO05D008285 1.2e-119 433.7 283 75.6
AL2G13060 Arabidopsis lyrata HOM05D006644 ORTHO05D008285 2.0e-119 433.0 306 72.5
Carub.0002s0225 Capsella rubella HOM05D006644 ORTHO05D008285 5.7e-119 431.4 303 71.6
Actinidia27444 Actinidia chinensis HOM05D006644 ORTHO05D008285 2.1e-113 412.9 262 77.9
Os06g0104100 Oryza sativa ssp. japonica HOM05D006644 ORTHO05D008285 2.3e-112 409.5 300 67.3
HPP92_012043 Vanilla planifolia HOM05D006644 ORTHO05D008285 5.2e-112 408.3 297 67.0
CDE05G2087 Ceratophyllum demersum HOM05D006644 ORTHO05D008285 6.8e-112 407.9 304 66.4
Zm00001eb268550 Zea mays HOM05D006644 ORTHO05D008285 2.0e-111 406.4 306 66.0
SGA_v2.0_scaffold13G06437 Striga asiatica HOM05D006644 ORTHO05D008285 5.7e-111 404.8 294 69.4
Dinv39097 Davidia involucrata HOM05D006644 ORTHO05D008285 1.0e-107 394.0 246 79.7
ATR0789G127 Amborella trichopoda HOM05D006644 ORTHO05D008285 2.9e-107 392.5 304 65.1
SalBow7G1671 Salvia bowleyana HOM05D006644 ORTHO05D008285 1.6e-105 386.7 270 72.2
GSVIVG01000849001 Vitis vinifera HOM05D006644 ORTHO05D008285 2.8e-102 375.9 266 71.4
Lalb_Chr16g0379761 Lupinus albus HOM05D006644 ORTHO05D008285 2.5e-98 362.8 218 83.9
AUR62010133 Chenopodium quinoa HOM05D006644 ORTHO05D008285 1.5e-95 353.6 242 70.7
SEGI_03161 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 9.8e-95 350.9 304 59.2
Zm00001eb268530 Zea mays HOM05D006644 ORTHO05D008285 3.0e-91 339.3 270 63.0
Ah.12g056410 Amaranthus hybridus HOM05D000927 ORTHO05D000850 4.7e-89 332.0 230 71.7
Zm00001eb201480 Zea mays HOM05D006644 ORTHO05D008285 1.2e-87 327.4 261 64.0
SEGI_02663 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 2.6e-87 326.2 291 58.4
Peaxi162Scf00102g01130 Petunia axillaris HOM05D006644 ORTHO05D008285 3.2e-85 319.3 295 58.6
Mapoly0004s0255 Marchantia polymorpha HOM05D006644 ORTHO05D008285 8.6e-83 311.2 301 55.1
CSS0049876 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 9.5e-82 307.8 196 76.5
Pp3c14_3830 Physcomitrium patens HOM05D006644 ORTHO05D008285 1.6e-81 307.0 300 53.3
Thhalv10029515m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 1.0e-75 287.7 304 54.3
SMO358G0371 Selaginella moellendorffii HOM05D006644 ORTHO05D008285 3.9e-75 285.8 297 51.9
Zm00001eb270010 Zea mays HOM05D006644 ORTHO05D008285 1.5e-74 283.9 202 70.3
CBR_g24133 Chara braunii HOM05D006644 ORTHO05D008285 1.9e-66 256.9 316 43.7
ATR0789G122 Amborella trichopoda HOM05D006644 ORTHO05D008285 2.1e-60 236.9 214 59.3
CSS0012505 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 2.4e-53 213.4 143 74.1
CSS0030048 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 2.3e-51 206.8 144 72.2
CSS0030367 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 3.3e-50 203.0 144 70.8
QL12p014121 Quercus lobata HOM05D006644 ORTHO05D008285 1.1e-48 198.0 303 42.6
MCO14G155 Micromonas commoda HOM05D006644 ORTHO05D008285 1.9e-45 187.2 317 37.9
CSS0018627 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 4.2e-45 186.0 144 68.8
AagrBONN_evm.TU.Sc2ySwM_362.950 Anthoceros agrestis HOM05D006644 ORTHO05D008285 5.1e-43 179.1 163 52.8
Thhalv10022385m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 1.8e-40 170.6 123 68.3
Cre03.g194300 Chlamydomonas reinhardtii HOM05D006644 ORTHO05D008285 3.4e-39 166.4 362 32.9
CSS0020508 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.2e-36 157.9 91 79.1
PRCOL_00006235 Prasinoderma coloniale HOM05D006644 ORTHO05D008285 7.4e-34 148.7 289 33.6
BcaC06g31907 Brassica carinata HOM05D006644 ORTHO05D008285 1.1e-32 144.8 264 38.6
Cfa023787 Carpinus fangiana HOM05D006644 ORTHO05D008285 1.7e-30 137.5 366 30.6
MBI05_g43359_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 6.7e-27 125.6 97 63.9
MBI05_g43358_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 1.1e-13 81.6 43 86.0


User provided reference genes

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