Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.13G064500 Glycine max HOM05D007272 ORTHO05D009305 3.4e-302 1040.8 501 100.0
Phvul.004G026700 Phaseolus vulgaris HOM05D007272 ORTHO05D009305 8.0e-227 790.4 499 78.0
Ca_04270_v3 Cicer arietinum L. HOM05D007272 ORTHO05D009305 8.9e-194 680.6 495 70.3
TPR.G4317 Trifolium pratense HOM05D007272 ORTHO05D009305 7.3e-188 661.0 494 68.8
Lj2g0023599 Lotus japonicus HOM05D007272 ORTHO05D009305 2.1e-187 659.4 493 69.4
Glyma.19G020400 Glycine max HOM05D007272 ORTHO05D009305 1.5e-185 653.3 344 93.0
arahy.Tifrunner.gnm1.ann1.UFNR33 Arachis hypogaea HOM05D007272 ORTHO05D009305 2.8e-179 632.5 500 64.4
Potri.017G079100 Populus trichocarpa HOM05D007272 ORTHO05D009305 3.6e-179 632.1 499 65.3
Sabra17G0070200 Salix brachista HOM05D007272 ORTHO05D009305 3.6e-179 632.1 504 64.3
Manes.17G022200 Manihot esculenta HOM05D007272 ORTHO05D009305 1.4e-178 630.2 491 63.3
Lj2g0009951 Lotus japonicus HOM05D007272 ORTHO05D009305 2.7e-174 615.9 489 65.6
Haze_14576 Corylus avellana HOM05D007272 ORTHO05D009305 4.6e-174 615.1 492 63.6
TWI34G0655 Tripterygium wilfordii HOM05D007272 ORTHO05D009305 6.0e-174 614.8 503 63.4
GSVIVG01011351001 Vitis vinifera HOM05D007272 ORTHO05D009305 3.0e-173 612.5 483 64.0
QL02p080768 Quercus lobata HOM05D007272 ORTHO05D009305 5.1e-173 611.7 486 63.6
VMungo0464G0783 Vigna mungo HOM05D007272 ORTHO05D009305 8.7e-173 610.9 404 77.2
Psat1g075440 Pisum sativum HOM05D007272 ORTHO05D009305 7.3e-172 607.8 492 64.0
Cfa007518 Carpinus fangiana HOM05D007272 ORTHO05D009305 6.2e-171 604.7 500 62.0
CiPaw.04G019400 Carya illinoinensis HOM05D007272 ORTHO05D009305 3.4e-169 599.0 500 61.6
Lalb_Chr21g0318941 Lupinus albus HOM05D007272 ORTHO05D009305 7.6e-169 597.8 485 62.9
Ciclev10011541m.g Citrus clementina HOM05D007272 ORTHO05D009305 2.2e-168 596.3 500 61.0
Prupe.3G271100 Prunus persica HOM05D007272 ORTHO05D009305 3.2e-167 592.4 504 60.9
Actinidia23567 Actinidia chinensis HOM05D007272 ORTHO05D009305 4.2e-167 592.0 494 60.9
Duzib187G0958 Durio zibethinus HOM05D007272 ORTHO05D009305 4.2e-167 592.0 512 60.7
Thecc.04G075900 Theobroma cacao HOM05D007272 ORTHO05D009305 2.1e-166 589.7 502 60.6
arahy.Tifrunner.gnm1.ann1.091QIK Arachis hypogaea HOM05D007272 ORTHO05D009305 1.8e-165 586.6 581 55.1
Hma1.2p1_0449F.1_g155160 Hydrangea macrophylla HOM05D007272 ORTHO05D009305 1.8e-165 586.6 503 60.8
TAR629G0691 Trochodendron aralioides HOM05D007272 ORTHO05D009305 4.0e-162 575.5 495 59.4
Gorai.006G025400 Gossypium raimondii HOM05D007272 ORTHO05D009305 5.3e-162 575.1 507 59.2
vmacro05725 Vaccinium macrocarpon HOM05D007272 ORTHO05D009305 1.3e-160 570.5 489 58.7
Gohir.A09G022200 Gossypium hirsutum HOM05D007272 ORTHO05D009305 2.2e-160 569.7 507 59.2
Nn3g17142 Nelumbo nucifera HOM05D007272 ORTHO05D009305 2.2e-160 569.7 500 57.2
PGR142G3376 Punica granatum HOM05D007272 ORTHO05D009305 4.6e-158 562.0 486 58.8
Cpa.g.sc14.36 Carica papaya HOM05D007272 ORTHO05D009305 7.9e-158 561.2 451 62.7
Sc10g0003770 Simmondsia chinensis HOM05D007272 ORTHO05D009305 1.0e-157 560.8 508 56.9
QL02p080779 Quercus lobata HOM05D007272 ORTHO05D009305 3.7e-155 552.4 531 56.9
MD17G1048000 Malus domestica HOM05D007272 ORTHO05D009305 1.0e-152 544.3 506 57.3
Gohir.D09G021400 Gossypium hirsutum HOM05D007272 ORTHO05D009305 1.6e-150 537.0 467 59.7
Lj7C400T1 Lonicera japonica HOM05D007272 ORTHO05D009305 7.9e-150 534.6 489 57.1
Ah.10g031300 Amaranthus hybridus HOM05D007272 ORTHO05D009305 5.7e-148 528.5 495 54.9
RhsimUnG0199700 Rhododendron simsii HOM05D007272 ORTHO05D009305 5.7e-148 528.5 566 51.1
AUR62031636 Chenopodium quinoa HOM05D007272 ORTHO05D009305 2.2e-147 526.6 494 53.8
HanXRQChr14g0449311 Helianthus annuus HOM05D007272 ORTHO05D009305 1.1e-146 524.2 492 54.5
DCAR_021668 Daucus carota HOM05D007272 ORTHO05D009305 1.8e-146 523.5 480 54.2
Migut.H00895 Erythranthe guttata HOM05D007272 ORTHO05D009305 3.1e-146 522.7 501 54.9
ClCG10G014870 Citrullus lanatus HOM05D007272 ORTHO05D009305 9.0e-146 521.2 490 54.7
RcHm_v2.0_Chr2g0169041 Rosa chinensis HOM05D007272 ORTHO05D009305 1.0e-144 517.7 504 55.8
Hund13235 Selenicereus undatus HOM05D007272 ORTHO05D009305 1.1e-143 514.2 479 55.1
RhsimUnG0056400 Rhododendron simsii HOM05D007272 ORTHO05D009305 4.2e-143 512.3 588 50.0
FAN05G2713 Fragaria x ananassa HOM05D007272 ORTHO05D009305 6.1e-142 508.4 503 55.3
Lsat_1_v5_gn_2_88701 Lactuca sativa HOM05D007272 ORTHO05D009305 3.0e-141 506.1 486 54.5
FAN02G2692 Fragaria x ananassa HOM05D001960 ORTHO05D004348 2.5e-140 503.1 496 55.0
FvH4_6g49170 Fragaria vesca HOM05D007272 ORTHO05D009305 3.3e-140 502.7 503 54.9
THA.LOC104822369 Tarenaya hassleriana HOM05D007272 ORTHO05D009305 4.3e-140 502.3 492 52.8
FAN14G5197 Fragaria x ananassa HOM05D007272 ORTHO05D009305 1.3e-139 500.7 503 54.7
Cc07_g03090 Coffea canephora HOM05D007272 ORTHO05D009305 1.8e-138 496.9 489 53.6
Nitab4.5_0009739g0030 Nicotiana tabacum HOM05D007272 ORTHO05D009305 3.4e-137 492.7 511 52.6
ECA238G2465 Erigeron canadensis HOM05D007272 ORTHO05D009305 7.7e-137 491.5 485 53.0
SalBow1G7111 Salvia bowleyana HOM05D007272 ORTHO05D009305 2.9e-136 489.6 503 53.1
EL10Ac2g02942 Beta vulgaris HOM05D007272 ORTHO05D009305 6.5e-136 488.4 501 52.9
MSTRG.3220 Avicennia marina HOM05D007272 ORTHO05D009305 1.0e-133 481.1 507 53.6
CANSAT64G0717 Cannabis sativa HOM05D007272 ORTHO05D009305 1.8e-133 480.3 485 51.3
COL.COLO4_25162 Corchorus olitorius HOM05D007118 ORTHO05D008957 5.3e-130 468.8 503 52.9
Peaxi162Scf00129g00431 Petunia axillaris HOM05D007272 ORTHO05D009305 7.0e-130 468.4 523 50.5
HPP92_000629 Vanilla planifolia HOM05D007272 ORTHO05D009305 1.7e-128 463.8 490 50.0
Oeu037173.1 Olea europaea HOM05D007272 ORTHO05D009305 5.0e-128 462.2 501 50.7
PSO591G0492 Papaver somniferum HOM05D007272 ORTHO05D009305 1.9e-127 460.3 484 49.0
Solyc02g087730.3 Solanum lycopersicum HOM05D007272 ORTHO05D009305 1.9e-127 460.3 506 50.8
Atru.chr8.1898 Acer truncatum HOM05D007272 ORTHO05D009305 9.4e-127 458.0 353 66.9
SGA_v2.0_scaffold135G34775 Striga asiatica HOM05D007118 ORTHO05D008957 9.4e-127 458.0 507 50.5
Sopen02g032460 Solanum pennellii HOM05D007272 ORTHO05D009305 2.1e-126 456.8 506 50.6
Medtr6g011500 Medicago truncatula HOM05D007272 ORTHO05D009305 2.6e-124 449.9 377 64.5
Dinv33728 Davidia involucrata HOM05D007272 ORTHO05D009305 7.4e-124 448.4 370 61.9
FAN09G2990 Fragaria x ananassa HOM05D007272 ORTHO05D009305 1.3e-123 447.6 412 57.8
Gohir.D04G050866 Gossypium hirsutum HOM05D007272 ORTHO05D009305 2.3e-117 426.8 467 49.7
Gorai.012G056400 Gossypium raimondii HOM05D007272 ORTHO05D009305 2.3e-117 426.8 467 49.7
ATR0706G038 Amborella trichopoda HOM05D007272 ORTHO05D009305 5.2e-117 425.6 488 47.1
PSO832G2300 Papaver somniferum HOM05D007272 ORTHO05D009305 5.3e-114 415.6 433 49.4
Gohir.A05G363800 Gossypium hirsutum HOM05D007272 ORTHO05D009305 7.0e-114 415.2 474 48.9
Aqoxy3G03290 Aquilegia oxysepala HOM05D007272 ORTHO05D009305 5.7e-108 395.6 406 51.0
Os01g0185400 Oryza sativa ssp. japonica HOM05D007272 ORTHO05D009305 1.5e-103 380.9 503 43.9
Zm00001eb121640 Zea mays HOM05D007272 ORTHO05D009305 1.5e-103 380.9 501 43.1
MD09G1047900 Malus domestica HOM05D007272 ORTHO05D009305 1.3e-96 357.8 528 43.4
MD17G1048100 Malus domestica HOM05D007272 ORTHO05D009305 3.3e-95 353.2 318 58.2
Nitab4.5_0000564g0300 Nicotiana tabacum HOM05D007272 ORTHO05D009305 8.9e-93 345.1 573 40.1
Pp3c15_23310 Physcomitrium patens HOM05D007272 ORTHO05D009305 7.0e-90 335.5 502 39.4
PGSC0003DMG400001312 Solanum tuberosum HOM05D007272 ORTHO05D009305 2.7e-81 307.0 291 57.7
Mapoly0135s0023 Marchantia polymorpha HOM05D007272 ORTHO05D009305 1.5e-79 301.2 490 39.0
SMO356G0594 Selaginella moellendorffii HOM05D007272 ORTHO05D009305 2.4e-74 283.9 480 37.5
CSS0013465 Camellia sinensis var. sinensis HOM05D007272 ORTHO05D009305 1.1e-69 268.5 221 62.0
CDE04G0606 Ceratophyllum demersum HOM05D007272 ORTHO05D009305 1.4e-50 204.9 189 54.5
CSS0034889 Camellia sinensis var. sinensis HOM05D007272 ORTHO05D009305 1.5e-44 184.9 229 48.5
Duzib147G0842 Durio zibethinus HOM05D007272 ORTHO05D009305 1.6e-38 164.9 170 53.5
VMungo0464G0246 Vigna mungo HOM05D007272 ORTHO05D009305 1.4e-37 161.8 132 62.1
Zm00001eb204740 Zea mays HOM05D007272 ORTHO05D009305 2.2e-27 127.9 219 38.8
Hma1.2p1_0449F.1_g155150 Hydrangea macrophylla HOM05D007272 ORTHO05D009305 2.5e-26 124.4 169 43.8
Hma1.2p1_2982F.1_g331245 Hydrangea macrophylla HOM05D007272 ORTHO05D009305 2.5e-26 124.4 169 43.8
Medtr8g044020 Medicago truncatula HOM05D007272 ORTHO05D009305 1.0e-24 119.0 180 42.2
Medtr6g011510 Medicago truncatula HOM05D007272 ORTHO05D009305 1.4e-24 118.6 121 51.2
AagrBONN_evm.TU.Sc2ySwM_344.2727 Anthoceros agrestis HOM05D007272 ORTHO05D009305 1.5e-23 115.2 182 34.6
Hma1.2p1_2982F.1_g331250 Hydrangea macrophylla HOM05D007272 ORTHO05D009305 6.9e-21 106.3 72 72.2
SGA_v2.0_scaffold52G19082 Striga asiatica HOM05D007272 ORTHO05D009305 1.3e-19 102.1 157 41.4
ATR0693G009 Amborella trichopoda HOM05D007272 ORTHO05D009305 6.5e-19 99.8 107 47.7
SGA_v2.0_scaffold52G19148 Striga asiatica HOM05D007272 ORTHO05D009305 1.5e-15 88.6 108 46.3
HanXRQChr07g0191831 Helianthus annuus HOM05D007272 ORTHO05D009305 2.2e-14 84.7 74 59.5
MELO3C030970.2 Cucumis melo HOM05D007272 ORTHO05D009305 4.1e-13 80.5 72 58.3
Dinv33460 Davidia involucrata HOM05D007272 ORTHO05D010159 1.5e-12 78.6 52 61.5
CDE04G1434 Ceratophyllum demersum HOM05D007272 ORTHO05D009305 4.5e-12 77.0 115 37.4
SGA_v2.0_scaffold52G19157 Striga asiatica HOM05D016586 ORTHO05D009305 6.5e-11 73.2 70 48.6
FAN19G2836 Fragaria x ananassa HOM05D007272 ORTHO05D045475 9.4e-10 69.3 40 77.5
Cfa022040 Carpinus fangiana HOM05D004736 ORTHO05D006424 5.2e-08 63.5 273 29.3
AUR62022086 Chenopodium quinoa HOM05D000453 ORTHO05D000387 4.8e-06 57.0 124 33.9
AagrBONN_evm.TU.Sc2ySwM_117.1900 Anthoceros agrestis HOM05D000921 ORTHO05D004153 6.3e-06 56.6 233 26.6
SMO358G0628 Selaginella moellendorffii HOM05D004758 ORTHO05D006063 6.3e-06 56.6 132 34.1
Zm00001eb326820 Zea mays HOM05D005508 ORTHO05D006882 6.3e-06 56.6 285 24.2
AUR62001235 Chenopodium quinoa HOM05D000453 ORTHO05D000387 8.2e-06 56.2 124 33.9


User provided reference genes

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