Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.13G060100 Glycine max HOM05D006813 ORTHO05D008657 4.8e-227 790.8 393 100.0
Phvul.004G032400 Phaseolus vulgaris HOM05D006813 ORTHO05D008657 1.1e-204 716.5 395 90.6
VMungo0464G0720 Vigna mungo HOM05D006813 ORTHO05D008657 1.7e-203 712.6 395 90.6
Glyma.19G026800 Glycine max HOM05D006813 ORTHO05D008657 2.2e-203 712.2 401 89.5
Medtr6g013150 Medicago truncatula HOM05D006813 ORTHO05D008657 3.0e-181 638.6 405 80.0
arahy.Tifrunner.gnm1.ann1.DSSH0H Arachis hypogaea HOM05D006813 ORTHO05D008657 1.7e-179 632.9 397 80.4
arahy.Tifrunner.gnm1.ann1.GGC6H3 Arachis hypogaea HOM05D006813 ORTHO05D008657 4.9e-179 631.3 397 80.1
Lj2g0012161 Lotus japonicus HOM05D006813 ORTHO05D008657 2.7e-177 625.5 399 81.5
Lalb_Chr02g0159111 Lupinus albus HOM05D006813 ORTHO05D008657 3.9e-176 621.7 403 77.7
Psat1g069960 Pisum sativum HOM05D006813 ORTHO05D008657 2.0e-172 609.4 403 77.2
Cfa007604 Carpinus fangiana HOM05D006813 ORTHO05D008657 1.3e-155 553.5 373 74.3
CSS0034099 Camellia sinensis var. sinensis HOM05D006813 ORTHO05D008657 8.4e-155 550.8 396 71.2
Haze_14484 Corylus avellana HOM05D006813 ORTHO05D008657 1.1e-154 550.4 365 74.8
QL02p085115 Quercus lobata HOM05D006813 ORTHO05D008657 1.2e-153 547.0 418 69.1
TAR371G1040 Trochodendron aralioides HOM05D006813 ORTHO05D008657 1.6e-153 546.6 364 73.9
PGR004G2573 Punica granatum HOM05D006813 ORTHO05D008657 2.7e-153 545.8 411 68.4
Manes.02G049900 Manihot esculenta HOM05D006813 ORTHO05D008657 1.3e-152 543.5 378 71.4
TWI34G0739 Tripterygium wilfordii HOM05D006813 ORTHO05D008657 5.1e-152 541.6 398 68.8
TWI34G0213 Tripterygium wilfordii HOM05D006813 ORTHO05D008657 5.6e-151 538.1 398 69.1
Nn4g23302 Nelumbo nucifera HOM05D006813 ORTHO05D008657 7.3e-151 537.7 372 71.0
Atru.chr8.345 Acer truncatum HOM05D006813 ORTHO05D008657 1.6e-150 536.6 401 67.8
Gorai.012G051400 Gossypium raimondii HOM05D006813 ORTHO05D008657 1.6e-150 536.6 395 68.4
Ciclev10013781m.g Citrus clementina HOM05D006813 ORTHO05D008657 2.1e-150 536.2 387 69.0
Potri.004G120900 Populus trichocarpa HOM05D006813 ORTHO05D008657 3.6e-150 535.4 370 71.6
Gohir.A05G369200 Gossypium hirsutum HOM05D006813 ORTHO05D008657 6.2e-150 534.6 374 70.6
CSS0013443 Camellia sinensis var. sinensis HOM05D006813 ORTHO05D008657 8.1e-150 534.3 396 67.2
RcHm_v2.0_Chr2g0166981 Rosa chinensis HOM05D006813 ORTHO05D008657 8.1e-150 534.3 410 65.9
Gohir.D04G046200 Gossypium hirsutum HOM05D006813 ORTHO05D008657 1.8e-149 533.1 395 67.8
FvH4_6g47790 Fragaria vesca HOM05D006813 ORTHO05D008657 8.9e-149 530.8 413 66.1
FAN14G3538 Fragaria x ananassa HOM05D006813 ORTHO05D008657 8.9e-149 530.8 413 66.1
Sabra04G0067300 Salix brachista HOM05D006813 ORTHO05D008657 1.2e-148 530.4 371 70.4
Actinidia06110 Actinidia chinensis HOM05D006813 ORTHO05D008657 1.5e-148 530.0 403 65.8
Aqoxy3G03517 Aquilegia oxysepala HOM05D006813 ORTHO05D008657 1.5e-148 530.0 343 73.8
Thecc.04G088600 Theobroma cacao HOM05D006813 ORTHO05D008657 7.6e-148 527.7 397 67.3
MBI07_g46965_MAGBIO Magnolia biondii HOM05D006813 ORTHO05D008657 1.7e-147 526.6 343 73.5
MD09G1056700 Malus domestica HOM05D006813 ORTHO05D008657 1.9e-146 523.1 412 64.8
GSVIVG01011472001 Vitis vinifera HOM05D006813 ORTHO05D008657 1.9e-146 523.1 391 67.3
Cc07_g03730 Coffea canephora HOM05D006813 ORTHO05D008657 2.4e-146 522.7 385 66.8
Sc14g0006120 Simmondsia chinensis HOM05D006813 ORTHO05D008657 2.4e-146 522.7 413 63.7
TPR.G26959 Trifolium pratense HOM05D006813 ORTHO05D008657 1.2e-145 520.4 294 85.0
ClCG11G004590 Citrullus lanatus HOM05D006813 ORTHO05D008657 2.7e-145 519.2 407 66.3
CsaV3_5G038340 Cucumis sativus L. HOM05D006813 ORTHO05D008657 3.5e-145 518.8 387 67.4
MELO3C022015.2 Cucumis melo HOM05D006813 ORTHO05D008657 1.0e-144 517.3 387 67.4
CiPaw.03G021100 Carya illinoinensis HOM05D006813 ORTHO05D008657 2.3e-144 516.2 401 66.8
Duzib264G0095 Durio zibethinus HOM05D006813 ORTHO05D008657 2.3e-144 516.2 381 67.7
Nitab4.5_0000568g0240 Nicotiana tabacum HOM05D006813 ORTHO05D008657 6.6e-144 514.6 362 67.4
THA.LOC104805490 Tarenaya hassleriana HOM05D006813 ORTHO05D008657 6.6e-144 514.6 404 64.6
Nitab4.5_0001591g0010 Nicotiana tabacum HOM05D006813 ORTHO05D008657 1.5e-143 513.5 391 64.5
CANSAT64G1527 Cannabis sativa HOM05D006813 ORTHO05D008657 7.3e-143 511.1 367 69.2
AUR62034457 Chenopodium quinoa HOM05D006813 ORTHO05D008657 9.6e-143 510.8 387 65.1
HanXRQChr09g0264041 Helianthus annuus HOM05D006813 ORTHO05D008657 1.6e-142 510.0 394 65.5
Actinidia01957 Actinidia chinensis HOM05D006813 ORTHO05D008657 8.1e-142 507.7 404 63.9
EL10Ac2g03036 Beta vulgaris HOM05D006813 ORTHO05D008657 8.1e-142 507.7 383 66.1
DCAR_025399 Daucus carota HOM05D006813 ORTHO05D008657 1.8e-141 506.5 372 68.3
MD17G1054200 Malus domestica HOM05D006813 ORTHO05D008657 3.1e-141 505.8 426 62.2
PSO063G1088 Papaver somniferum HOM05D006813 ORTHO05D008657 4.0e-141 505.4 347 70.0
AL5G19100 Arabidopsis lyrata HOM05D006813 ORTHO05D008657 1.3e-139 500.4 346 70.2
AT3G29185 Arabidopsis thaliana HOM05D006813 ORTHO05D008657 2.9e-139 499.2 396 63.4
MSTRG.3341 Avicennia marina HOM05D006813 ORTHO05D008657 2.9e-139 499.2 388 65.5
CDE04G0700 Ceratophyllum demersum HOM05D006813 ORTHO05D008657 3.8e-139 498.8 364 67.3
Solyc02g088350.4 Solanum lycopersicum HOM05D006813 ORTHO05D008657 4.9e-139 498.4 394 62.2
Dinv33795 Davidia involucrata HOM05D006813 ORTHO05D008657 8.4e-139 497.7 311 76.8
PSO063G3583 Papaver somniferum HOM05D006813 ORTHO05D008657 8.4e-139 497.7 347 69.7
Sopen02g033040 Solanum pennellii HOM05D006813 ORTHO05D008657 8.4e-139 497.7 394 61.7
Lsat_1_v5_gn_4_170001 Lactuca sativa HOM05D006813 ORTHO05D008657 1.4e-138 496.9 391 63.9
C07p38090 Brassica napus HOM05D006813 ORTHO05D008657 1.9e-138 496.5 400 63.8
BolC7t44331H Brassica oleracea HOM05D006813 ORTHO05D008657 1.9e-138 496.5 400 63.8
CAN.G206.184 Capsicum annuum HOM05D006813 ORTHO05D008657 1.9e-138 496.5 397 62.2
Thhalv10004355m.g Eutrema salsugineum HOM05D006813 ORTHO05D008657 1.9e-138 496.5 400 64.0
PGSC0003DMG400001435 Solanum tuberosum HOM05D006813 ORTHO05D008657 1.9e-138 496.5 345 67.5
ECA232G0359 Erigeron canadensis HOM05D006813 ORTHO05D008657 4.2e-138 495.4 376 64.4
BcaC06g30887 Brassica carinata HOM05D006813 ORTHO05D008657 7.1e-138 494.6 397 63.5
Sp2g17800 Schrenkiella parvula HOM05D006813 ORTHO05D008657 1.2e-137 493.8 394 62.9
HPP92_015887 Vanilla planifolia HOM05D006813 ORTHO05D008657 1.2e-137 493.8 371 64.7
ATR0730G176 Amborella trichopoda HOM05D006813 ORTHO05D008657 6.0e-137 491.5 344 69.8
BcaC06g33677 Brassica carinata HOM05D006813 ORTHO05D008657 1.0e-136 490.7 402 63.7
A06p40070 Brassica napus HOM05D006813 ORTHO05D008657 1.3e-136 490.3 398 63.3
BraA06t26922Z Brassica rapa HOM05D006813 ORTHO05D008657 1.3e-136 490.3 398 63.3
Rhsim10G0035200 Rhododendron simsii HOM05D006813 ORTHO05D008657 1.3e-136 490.3 345 69.6
COL.COLO4_12242 Corchorus olitorius HOM05D006813 ORTHO05D008657 5.6e-135 485.0 320 74.1
SalBow1G5727 Salvia bowleyana HOM05D006813 ORTHO05D008657 7.4e-135 484.6 379 65.2
AUR62018125 Chenopodium quinoa HOM05D006813 ORTHO05D008657 2.1e-134 483.0 323 71.8
Peaxi162Scf00166g00933 Petunia axillaris HOM05D006813 ORTHO05D008657 8.1e-134 481.1 320 70.6
vmacro05678 Vaccinium macrocarpon HOM05D006813 ORTHO05D008657 8.1e-134 481.1 345 68.1
Aa31LG2G4040 Aethionema arabicum HOM05D006813 ORTHO05D008657 9.0e-133 477.6 406 60.3
Lju41A8T104 Lonicera japonica HOM05D006813 ORTHO05D008657 7.6e-132 474.6 371 64.7
Hund13179 Selenicereus undatus HOM05D006813 ORTHO05D008657 1.9e-130 469.9 392 60.7
Os03g0758900 Oryza sativa ssp. japonica HOM05D006813 ORTHO05D008657 4.6e-129 465.3 372 62.6
Migut.K01297 Erythranthe guttata HOM05D006813 ORTHO05D008657 6.0e-129 464.9 351 65.2
Zm00001eb057930 Zea mays HOM05D006813 ORTHO05D008657 1.5e-127 460.3 347 65.7
SGA_v2.0_scaffold154G37082 Striga asiatica HOM05D006813 ORTHO05D008657 1.6e-126 456.8 358 65.4
CARHR152350 Cardamine hirsuta HOM05D006813 ORTHO05D008657 9.3e-122 441.0 405 59.0
Ca_04860_v3 Cicer arietinum L. HOM05D006813 ORTHO05D002040 1.3e-120 437.2 408 59.8
Zm00001eb214510 Zea mays HOM05D006813 ORTHO05D008657 1.7e-115 420.2 373 57.4
Oeu023718.1 Olea europaea HOM05D006813 ORTHO05D008657 1.1e-114 417.5 347 63.4
unitig_0.g2631 Utricularia gibba HOM05D004633 ORTHO05D005503 1.1e-114 417.5 375 56.5
Prupe.3G262000 Prunus persica HOM05D006813 ORTHO05D008657 4.5e-108 395.6 250 75.6
SEGI_06128 Sequoiadendron giganteum HOM05D006813 ORTHO05D008657 1.9e-106 390.2 347 56.5
Carub.0005s0792 Capsella rubella HOM05D006813 ORTHO05D008657 6.7e-104 381.7 258 70.9
Dinv11496 Davidia involucrata HOM05D006813 ORTHO05D008657 5.7e-103 378.6 282 68.1
Sed0010301 Sechium edule HOM05D006813 ORTHO05D008657 5.7e-103 378.6 250 73.2
FAN05G4860 Fragaria x ananassa HOM05D006813 ORTHO05D008657 4.1e-101 372.5 360 57.5
MBI07_g25549_MAGBIO Magnolia biondii HOM05D006813 ORTHO05D008657 4.2e-98 362.5 272 66.5
SalBow1G0723 Salvia bowleyana HOM05D006813 ORTHO05D008657 4.2e-90 335.9 282 62.8
Haze_14493 Corylus avellana HOM05D006813 ORTHO05D008657 2.2e-86 323.6 251 65.7
Mapoly0015s0143 Marchantia polymorpha HOM05D006813 ORTHO05D008657 1.6e-84 317.4 383 43.6
Pp3c27_2000 Physcomitrium patens HOM05D006813 ORTHO05D008657 5.5e-82 308.9 339 45.1
SMO347G0068 Selaginella moellendorffii HOM05D006813 ORTHO05D008657 2.0e-71 273.9 340 41.2
HPP92_015898 Vanilla planifolia HOM05D006813 ORTHO05D008657 1.4e-61 241.1 183 60.7
BcaC06g30885 Brassica carinata HOM05D006813 ORTHO05D008657 1.7e-43 181.0 125 69.6
TPR.G26199 Trifolium pratense HOM05D006813 ORTHO05D001332 5.6e-42 176.0 97 84.5
AagrBONN_evm.TU.Sc2ySwM_117.3657 Anthoceros agrestis HOM05D006813 ORTHO05D008657 8.9e-40 168.7 188 46.8
MD09G1057100 Malus domestica HOM05D006813 ORTHO05D008657 2.1e-36 157.5 158 51.9
SalBow1G7870 Salvia bowleyana HOM05D006813 ORTHO05D008657 1.3e-35 154.8 91 76.9
FAN10G0034 Fragaria x ananassa HOM05D004096 ORTHO05D000898 2.5e-34 150.6 161 50.3
HPP92_015897 Vanilla planifolia HOM05D006813 ORTHO05D008657 9.9e-31 138.7 125 59.2
HanXRQChr08g0223741 Helianthus annuus HOM05D006813 ORTHO05D008657 1.9e-18 97.8 85 58.8
ECA247G1425 Erigeron canadensis HOM05D006813 ORTHO05D008657 2.4e-16 90.9 53 71.7
TAR633G2432 Trochodendron aralioides HOM05D006813 ORTHO05D414814 6.9e-16 89.4 93 52.7


User provided reference genes

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