Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.13G047800 Glycine max HOM05D002617 ORTHO05D009035 1.4e-306 1055.4 530 100.0
Phvul.005G010600 Phaseolus vulgaris HOM05D002617 ORTHO05D009035 1.3e-267 926.0 523 86.6
Lj2g0019105 Lotus japonicus HOM05D002617 ORTHO05D009035 2.2e-243 845.5 522 79.7
Psat1g062120 Pisum sativum HOM05D002617 ORTHO05D009035 3.8e-243 844.7 523 78.8
Medtr6g016985 Medicago truncatula HOM05D002617 ORTHO05D009035 5.5e-242 840.9 521 78.9
Glyma.14G157500 Glycine max HOM05D002617 ORTHO05D009035 4.5e-228 794.7 423 92.7
Ca_14082_v3 Cicer arietinum L. HOM05D002617 ORTHO05D009035 6.5e-227 790.8 492 78.7
arahy.Tifrunner.gnm1.ann1.7SH6PF Arachis hypogaea HOM05D002617 ORTHO05D009035 4.3e-215 751.5 523 71.1
Cfa007960 Carpinus fangiana HOM05D002617 ORTHO05D009035 3.4e-212 741.9 520 71.0
arahy.Tifrunner.gnm1.ann1.37DWZ9 Arachis hypogaea HOM05D002617 ORTHO05D009035 1.0e-211 740.3 527 70.0
QL02p053130 Quercus lobata HOM05D002617 ORTHO05D009035 3.2e-210 735.3 523 69.6
Dinv33921 Davidia involucrata HOM05D002617 ORTHO05D009035 1.1e-205 720.3 527 68.5
CiPaw.09G147400 Carya illinoinensis HOM05D002617 ORTHO05D009035 3.1e-205 718.8 508 69.9
TAR629G1601 Trochodendron aralioides HOM05D002617 ORTHO05D009035 1.2e-201 706.8 526 65.6
Cfa007963 Carpinus fangiana HOM05D002617 ORTHO05D009035 2.3e-200 702.6 532 67.7
TPR.G9672 Trifolium pratense HOM05D002617 ORTHO05D009035 6.7e-200 701.0 415 79.8
Prupe.3G241200 Prunus persica HOM05D002617 ORTHO05D009035 1.8e-197 693.0 521 65.6
Rhsim10G0064400 Rhododendron simsii HOM05D002617 ORTHO05D009035 4.5e-196 688.3 527 63.9
FvH4_6g45490 Fragaria vesca HOM05D002617 ORTHO05D009035 3.2e-194 682.2 526 63.9
Hma1.2p1_0136F.1_g062000 Hydrangea macrophylla HOM05D002617 ORTHO05D009035 6.1e-193 677.9 519 65.9
FAN05G4565 Fragaria x ananassa HOM05D002617 ORTHO05D009035 4.0e-192 675.2 530 62.8
Thecc.04G140600 Theobroma cacao HOM05D002617 ORTHO05D009035 1.1e-189 667.2 524 62.2
PGR042G2862 Punica granatum HOM05D002617 ORTHO05D009035 1.8e-189 666.4 527 61.5
Actinidia36305 Actinidia chinensis HOM05D002617 ORTHO05D009035 5.9e-188 661.4 529 63.3
TWI53G1449 Tripterygium wilfordii HOM05D002617 ORTHO05D009035 5.9e-188 661.4 527 60.2
Sabra04G0077100 Salix brachista HOM05D002617 ORTHO05D009035 1.5e-186 656.8 522 61.3
GSVIVG01036455001 Vitis vinifera HOM05D002617 ORTHO05D009035 2.5e-186 656.0 496 64.9
Nn3g17671 Nelumbo nucifera HOM05D002617 ORTHO05D009035 2.7e-185 652.5 510 61.6
DCAR_011250 Daucus carota HOM05D002617 ORTHO05D009035 8.8e-184 647.5 527 61.3
RcHm_v2.0_Chr2g0163431 Rosa chinensis HOM05D002617 ORTHO05D009035 4.9e-182 641.7 560 58.8
COL.COLO4_16208 Corchorus olitorius HOM05D002617 ORTHO05D009035 1.4e-181 640.2 530 59.8
CSS0020455 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D009035 2.0e-180 636.3 529 62.0
Ciclev10013582m.g Citrus clementina HOM05D002617 ORTHO05D009035 2.3e-179 632.9 489 64.2
Duzib151G0578 Durio zibethinus HOM05D002617 ORTHO05D009035 8.9e-176 620.9 519 59.7
Lj4A130G15 Lonicera japonica HOM05D002617 ORTHO05D009035 3.2e-173 612.5 539 60.3
Cc07_g05000 Coffea canephora HOM05D002617 ORTHO05D009035 9.2e-173 610.9 524 59.7
Aqoxy3G00430 Aquilegia oxysepala HOM05D002617 ORTHO05D009035 3.9e-171 605.5 522 58.0
FAN14G1977 Fragaria x ananassa HOM05D002617 ORTHO05D009035 5.0e-171 605.1 542 58.7
Gohir.A10G140200 Gossypium hirsutum HOM05D002617 ORTHO05D009035 3.3e-170 602.4 520 60.2
AUR62008950 Chenopodium quinoa HOM05D002617 ORTHO05D009035 1.8e-168 596.7 525 57.0
Gohir.D10G126600 Gossypium hirsutum HOM05D002617 ORTHO05D009035 3.1e-168 595.9 520 58.7
HPP92_020267 Vanilla planifolia HOM05D002617 ORTHO05D009035 2.9e-166 589.3 511 55.8
Peaxi162Scf00479g00211 Petunia axillaris HOM05D002617 ORTHO05D009035 2.4e-165 586.3 528 55.5
Oeu043862.1 Olea europaea HOM05D002617 ORTHO05D009035 1.6e-164 583.6 448 63.6
Manes.02G065900 Manihot esculenta HOM05D002617 ORTHO05D009035 5.0e-163 578.6 426 67.6
Haze_14108 Corylus avellana HOM05D002617 ORTHO05D009035 1.5e-162 577.0 501 60.5
Sc11g0008110 Simmondsia chinensis HOM05D002617 ORTHO05D009035 7.3e-162 574.7 496 58.1
Gorai.011G139500 Gossypium raimondii HOM05D002617 ORTHO05D009035 1.8e-160 570.1 520 57.1
PSO832G3224 Papaver somniferum HOM05D002617 ORTHO05D009035 3.0e-155 552.7 518 53.9
MBI16_g23736_MAGBIO Magnolia biondii HOM05D002617 ORTHO05D009035 8.6e-155 551.2 512 55.1
PSO478G1567 Papaver somniferum HOM05D002617 ORTHO05D009035 7.3e-154 548.1 532 52.4
Nitab4.5_0000612g0170 Nicotiana tabacum HOM05D002617 ORTHO05D009035 3.1e-152 542.7 550 52.7
EL10Ac2g04621 Beta vulgaris HOM05D002617 ORTHO05D009035 8.9e-152 541.2 513 52.6
Potri.004G104500 Populus trichocarpa HOM05D002617 ORTHO05D009035 8.9e-152 541.2 433 61.9
Ah.06g191010 Amaranthus hybridus HOM05D002617 ORTHO05D009035 1.5e-151 540.4 492 54.9
SGA_v2.0_scaffold150G36618 Striga asiatica HOM05D002617 ORTHO05D009035 4.4e-151 538.9 532 54.1
Sopen03g009540 Solanum pennellii HOM05D002617 ORTHO05D009035 3.2e-149 532.7 523 53.0
Ah.06g191000 Amaranthus hybridus HOM05D002617 ORTHO05D009035 3.5e-148 529.3 492 54.3
MD09G1082500 Malus domestica HOM05D002617 ORTHO05D009035 1.3e-147 527.3 418 61.5
Migut.H00535 Erythranthe guttata HOM05D002617 ORTHO05D009035 1.7e-147 526.9 481 56.8
ECA238G3370 Erigeron canadensis HOM05D002617 ORTHO05D009035 2.8e-145 519.6 490 54.5
CiPaw.09G147200 Carya illinoinensis HOM05D002617 ORTHO05D009035 8.1e-145 518.1 412 64.1
Lsat_1_v5_gn_2_86600 Lactuca sativa HOM05D002617 ORTHO05D009035 2.4e-144 516.5 572 48.6
Eucgr.J01458 Eucalyptus grandis HOM05D002617 ORTHO05D009035 1.1e-141 507.7 538 50.7
Nitab4.5_0003461g0060 Nicotiana tabacum HOM05D002617 ORTHO05D009035 2.4e-141 506.5 543 51.2
Cpa.g.sc179.39 Carica papaya HOM05D002617 ORTHO05D009035 4.2e-141 505.8 541 51.0
AT5G16020 Arabidopsis thaliana HOM05D002617 ORTHO05D009035 1.6e-140 503.8 518 49.4
Lalb_Chr10g0092311 Lupinus albus HOM05D002617 ORTHO05D009035 1.0e-139 501.1 332 72.6
AL6G26890 Arabidopsis lyrata HOM05D002617 ORTHO05D009035 8.7e-139 498.0 522 48.7
CARHR197300 Cardamine hirsuta HOM05D002617 ORTHO05D009035 9.6e-138 494.6 522 48.5
FAN09G3897 Fragaria x ananassa HOM05D002617 ORTHO05D009035 1.4e-136 490.7 563 49.2
Thhalv10015867m.g Eutrema salsugineum HOM05D002617 ORTHO05D009035 9.0e-136 488.0 517 47.8
Carub.0006s1420 Capsella rubella HOM05D002617 ORTHO05D009035 1.2e-135 487.6 534 46.8
A10p23040 Brassica napus HOM05D002617 ORTHO05D009035 2.6e-135 486.5 517 49.1
BraA10t44373Z Brassica rapa HOM05D002617 ORTHO05D009035 2.6e-135 486.5 517 49.1
THA.LOC104827464 Tarenaya hassleriana HOM05D002617 ORTHO05D009035 9.9e-135 484.6 453 53.9
ATR0820G227 Amborella trichopoda HOM05D002617 ORTHO05D009035 3.8e-134 482.6 507 47.5
BcaB08g36879 Brassica carinata HOM05D002617 ORTHO05D009035 3.2e-133 479.6 521 47.8
HanXRQChr14g0452391 Helianthus annuus HOM05D002617 ORTHO05D009035 9.3e-133 478.0 544 46.7
C09p61030 Brassica napus HOM05D002617 ORTHO05D009035 2.1e-132 476.9 511 48.9
BolC9t58948H Brassica oleracea HOM05D002617 ORTHO05D009035 3.5e-132 476.1 511 48.9
Atru.chr8.789 Acer truncatum HOM05D002617 ORTHO05D009035 1.0e-131 474.6 346 63.3
Zm00001eb161540 Zea mays HOM05D002617 ORTHO05D009035 1.3e-131 474.2 531 45.6
vmacro05580 Vaccinium macrocarpon HOM05D002617 ORTHO05D009035 1.9e-130 470.3 336 65.5
SHI30168 Sapria himalayana HOM05D002617 ORTHO05D009035 2.1e-129 466.8 508 48.8
PSO013G0088 Papaver somniferum HOM05D002617 ORTHO05D009035 3.1e-128 463.0 479 52.0
BcaC04g18915 Brassica carinata HOM05D002617 ORTHO05D009035 1.2e-124 451.1 507 48.1
AUR62014551 Chenopodium quinoa HOM05D002617 ORTHO05D009035 1.0e-123 448.0 454 49.8
Aa31LG11G13590 Aethionema arabicum HOM05D002617 ORTHO05D009035 9.6e-122 441.4 522 46.2
CANSAT56G0222 Cannabis sativa HOM05D002617 ORTHO05D009035 3.4e-111 406.4 341 56.9
Os01g0605400 Oryza sativa ssp. japonica HOM05D002617 ORTHO05D009035 4.5e-111 406.0 517 42.6
Solyc03g045080.3 Solanum lycopersicum HOM05D002617 ORTHO05D009035 1.0e-110 404.8 358 58.1
SalBow1G3878 Salvia bowleyana HOM05D002617 ORTHO05D009035 1.9e-106 390.6 364 58.2
unitig_899.g15127 Utricularia gibba HOM05D002617 ORTHO05D009035 5.0e-102 375.9 528 41.3
CAN.G153.15 Capsicum annuum HOM05D002617 ORTHO05D009035 1.8e-96 357.5 424 49.1
PGSC0003DMG400018767 Solanum tuberosum HOM05D002617 ORTHO05D009035 4.5e-95 352.8 393 48.9
FAN02G3888 Fragaria x ananassa HOM05D002617 ORTHO05D009035 7.2e-93 345.5 253 61.7
CDE06G1275 Ceratophyllum demersum HOM05D002617 ORTHO05D009035 3.1e-88 330.1 322 50.3
Actinidia18118 Actinidia chinensis HOM05D002617 ORTHO05D009035 3.1e-80 303.5 213 65.7
FAN02G3008 Fragaria x ananassa HOM05D002617 ORTHO05D009035 2.5e-77 293.9 297 55.9
CANSAT56G3033 Cannabis sativa HOM05D002617 ORTHO05D009035 8.6e-70 268.9 297 55.2
arahy.Tifrunner.gnm1.ann1.3A0B2Z Arachis hypogaea HOM05D002617 ORTHO05D009035 6.3e-65 252.7 176 73.9
CANSAT56G4171 Cannabis sativa HOM05D002617 ORTHO05D009035 3.1e-64 250.4 206 55.3
CiPaw.09G170800 Carya illinoinensis HOM05D002617 ORTHO05D009035 1.0e-59 235.3 190 66.3
Haze_14109 Corylus avellana HOM05D002617 ORTHO05D006076 5.4e-48 196.4 148 73.0
Haze_14111 Corylus avellana HOM05D002617 ORTHO05D006076 1.7e-46 191.4 145 72.4
vmacro05579 Vaccinium macrocarpon HOM05D002617 ORTHO05D009035 6.2e-44 183.0 156 60.9
MSTRG.23827 Avicennia marina HOM05D002617 ORTHO05D009035 1.3e-41 175.3 168 58.3
Lalb_Chr10g0092331 Lupinus albus HOM05D002617 ORTHO05D009035 6.4e-25 119.8 102 63.7
SMO116G0487 Selaginella moellendorffii HOM05D002617 ORTHO05D009035 1.3e-20 105.5 218 28.0
Lalb_Chr10g0092321 Lupinus albus HOM05D002617 ORTHO05D009035 5.3e-19 100.1 68 77.9
Nn4g26093 Nelumbo nucifera HOM05D001650 ORTHO05D001592 9.9e-18 95.9 79 64.6
CBR_g48653 Chara braunii HOM05D001394 ORTHO05D001237 5.4e-16 90.1 226 26.5
TAR705G0001 Trochodendron aralioides HOM05D001309 ORTHO05D000385 8.7e-14 82.8 75 53.3
TAR629G1810 Trochodendron aralioides HOM05D004423 ORTHO05D005464 9.3e-08 62.8 42 64.3


User provided reference genes

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