Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.13G025700 Glycine max HOM05D007219 ORTHO05D008995 1.2e-109 399.8 200 100.0
Phvul.006G013300 Phaseolus vulgaris HOM05D007219 ORTHO05D008995 2.5e-94 349.0 204 86.8
Lj6g0005071 Lotus japonicus HOM05D007219 ORTHO05D008995 1.5e-88 329.7 197 81.7
Medtr3g083200 Medicago truncatula HOM05D007219 ORTHO05D008995 3.0e-84 315.5 198 79.3
Psat5g102680 Pisum sativum HOM05D007219 ORTHO05D008995 3.9e-84 315.1 197 79.2
Lalb_Chr22g0360881 Lupinus albus HOM05D007219 ORTHO05D008995 1.1e-83 313.5 193 79.3
arahy.Tifrunner.gnm1.ann1.N6EW4G Arachis hypogaea HOM05D007219 ORTHO05D008995 1.5e-83 313.2 195 78.5
TPR.G19322 Trifolium pratense HOM05D007219 ORTHO05D008995 3.7e-82 308.5 198 76.8
QL08p028873 Quercus lobata HOM05D007219 ORTHO05D008995 4.8e-82 308.1 196 75.0
Prupe.3G202800 Prunus persica HOM05D007219 ORTHO05D008995 9.1e-81 303.9 198 74.2
FvH4_6g41300 Fragaria vesca HOM05D007219 ORTHO05D008995 4.5e-80 301.6 200 73.0
FAN14G1895 Fragaria x ananassa HOM05D007219 ORTHO05D008995 2.2e-79 299.3 200 72.5
RcHm_v2.0_Chr2g0156861 Rosa chinensis HOM05D007219 ORTHO05D008995 5.0e-79 298.1 197 74.1
Duzib138G0301 Durio zibethinus HOM05D007219 ORTHO05D008995 1.4e-78 296.6 194 73.7
TAR626G0546 Trochodendron aralioides HOM05D007219 ORTHO05D008995 2.5e-78 295.8 194 74.2
MD09G1120700 Malus domestica HOM05D007219 ORTHO05D008995 3.2e-78 295.4 198 74.2
GSVIVG01030037001 Vitis vinifera HOM05D007219 ORTHO05D008995 3.2e-78 295.4 190 75.8
Cpa.g.sc395.3 Carica papaya HOM05D007219 ORTHO05D008995 4.6e-77 291.6 194 73.7
Thecc.01G189100 Theobroma cacao HOM05D007219 ORTHO05D008995 1.4e-76 290.0 194 72.2
Gohir.A07G167500 Gossypium hirsutum HOM05D007219 ORTHO05D008995 1.5e-75 286.6 194 72.2
Gohir.D07G173000 Gossypium hirsutum HOM05D007219 ORTHO05D008995 2.0e-75 286.2 194 71.1
Gorai.001G193200 Gossypium raimondii HOM05D007219 ORTHO05D008995 2.0e-75 286.2 194 71.1
Potri.014G161800 Populus trichocarpa HOM05D007219 ORTHO05D008995 2.6e-75 285.8 194 73.2
CSS0025035 Camellia sinensis var. sinensis HOM05D007219 ORTHO05D008995 3.3e-75 285.4 193 73.1
Atru.chr6.3346 Acer truncatum HOM05D007219 ORTHO05D008995 4.4e-75 285.0 194 72.2
Manes.12G083700 Manihot esculenta HOM05D007219 ORTHO05D008995 9.7e-75 283.9 178 77.5
TWI36G0002 Tripterygium wilfordii HOM05D007219 ORTHO05D008995 9.7e-75 283.9 194 71.1
CiPaw.03G278000 Carya illinoinensis HOM05D007219 ORTHO05D008995 1.7e-74 283.1 198 70.7
Dinv05845 Davidia involucrata HOM05D007219 ORTHO05D008995 2.2e-74 282.7 187 73.3
Hma1.2p1_0133F.1_g061230 Hydrangea macrophylla HOM05D007219 ORTHO05D008995 2.2e-74 282.7 192 71.9
vmacro12114 Vaccinium macrocarpon HOM05D007219 ORTHO05D008995 2.2e-74 282.7 194 72.7
Cc07_g19250 Coffea canephora HOM05D007219 ORTHO05D008995 2.8e-74 282.3 192 72.9
Sopen05g025870 Solanum pennellii HOM05D007219 ORTHO05D008995 4.8e-74 281.6 194 71.6
Migut.M00020 Erythranthe guttata HOM05D007219 ORTHO05D008995 8.2e-74 280.8 193 71.0
THA.LOC104826618 Tarenaya hassleriana HOM05D007219 ORTHO05D008995 8.2e-74 280.8 193 69.9
Sp3g23430 Schrenkiella parvula HOM05D007219 ORTHO05D008995 5.3e-73 278.1 193 68.4
CAN.G716.12 Capsicum annuum HOM05D007219 ORTHO05D008995 6.9e-73 277.7 194 70.1
CsaV3_7G002720 Cucumis sativus L. HOM05D007219 ORTHO05D008995 6.9e-73 277.7 200 70.0
Hund24148 Selenicereus undatus HOM05D007219 ORTHO05D008995 6.9e-73 277.7 183 74.3
AT2G04845 Arabidopsis thaliana HOM05D007219 ORTHO05D008995 9.1e-73 277.3 193 68.4
CARHR102840 Cardamine hirsuta HOM05D007219 ORTHO05D008995 2.0e-72 276.2 193 68.9
MSTRG.14930 Avicennia marina HOM05D007219 ORTHO05D008995 5.9e-72 274.6 194 70.6
Haze_12702 Corylus avellana HOM05D007219 ORTHO05D008995 1.3e-71 273.5 191 70.7
Nn1g03266 Nelumbo nucifera HOM05D007219 ORTHO05D008995 1.3e-71 273.5 185 72.4
Nitab4.5_0011106g0020 Nicotiana tabacum HOM05D007219 ORTHO05D008995 2.2e-71 272.7 193 69.9
Peaxi162Scf00147g01822 Petunia axillaris HOM05D007219 ORTHO05D008995 3.8e-71 271.9 194 68.0
SalBow7G0564 Salvia bowleyana HOM05D007219 ORTHO05D008995 5.0e-71 271.6 192 68.2
Carub.0003s2645 Capsella rubella HOM05D007219 ORTHO05D008995 6.5e-71 271.2 193 67.4
Oeu029809.1 Olea europaea HOM05D007219 ORTHO05D008995 8.5e-71 270.8 192 69.3
AL3G42440 Arabidopsis lyrata HOM05D007219 ORTHO05D008995 1.1e-70 270.4 193 66.8
ECA234G4660 Erigeron canadensis HOM05D007219 ORTHO05D008995 1.1e-70 270.4 194 68.0
Thhalv10002661m.g Eutrema salsugineum HOM05D007219 ORTHO05D008995 1.1e-70 270.4 193 68.4
Eucgr.K00659 Eucalyptus grandis HOM05D007219 ORTHO05D008995 2.5e-70 269.2 188 69.7
PGR142G0267 Punica granatum HOM05D007219 ORTHO05D008995 5.5e-70 268.1 195 67.7
Lsat_1_v5_gn_5_121560 Lactuca sativa HOM05D007219 ORTHO05D008995 7.2e-70 267.7 194 68.0
Aa31LG1G4150 Aethionema arabicum HOM05D002708 ORTHO05D003516 1.2e-69 266.9 193 65.8
ATR0712G058 Amborella trichopoda HOM05D007219 ORTHO05D008995 1.2e-69 266.9 194 66.0
PGSC0003DMG400020758 Solanum tuberosum HOM05D007219 ORTHO05D008995 1.2e-69 266.9 169 76.3
CANSAT64G0298 Cannabis sativa HOM05D007219 ORTHO05D008995 2.1e-69 266.2 192 67.7
BolC3t17801H Brassica oleracea HOM05D007219 ORTHO05D008995 3.6e-69 265.4 193 64.8
DCAR_019229 Daucus carota HOM05D007219 ORTHO05D008995 4.7e-69 265.0 192 70.8
arahy.Tifrunner.gnm1.ann1.E78GDQ Arachis hypogaea HOM05D007219 ORTHO05D008995 6.1e-69 264.6 321 48.3
arahy.Tifrunner.gnm1.ann1.XZ9N91 Arachis hypogaea HOM05D007219 ORTHO05D008995 6.1e-69 264.6 321 48.3
Sed0018447 Sechium edule HOM05D007219 ORTHO05D008995 6.1e-69 264.6 172 76.2
Aqoxy1G04023 Aquilegia oxysepala HOM05D007219 ORTHO05D008995 3.0e-68 262.3 192 67.7
HanXRQChr12g0373931 Helianthus annuus HOM05D007219 ORTHO05D008995 5.2e-68 261.5 187 68.4
PSO302G0207 Papaver somniferum HOM05D007219 ORTHO05D008995 1.1e-65 253.8 178 70.2
CDE10G1006 Ceratophyllum demersum HOM05D007219 ORTHO05D008995 1.8e-65 253.1 174 71.8
Duzib133G0547 Durio zibethinus HOM05D007219 ORTHO05D008995 1.2e-64 250.4 182 68.7
Sabra14G0123400 Salix brachista HOM05D007219 ORTHO05D008995 2.0e-64 249.6 268 53.4
MELO3C024213.2 Cucumis melo HOM05D007219 ORTHO05D008995 3.5e-64 248.8 200 64.0
HPP92_020392 Vanilla planifolia HOM05D007219 ORTHO05D008995 2.9e-63 245.7 180 67.2
FAN05G4854 Fragaria x ananassa HOM05D007219 ORTHO05D008995 1.5e-62 243.4 206 62.6
Ciclev10016673m.g Citrus clementina HOM05D007219 ORTHO05D008995 7.2e-62 241.1 154 75.3
COL.COLO4_04268 Corchorus olitorius HOM05D007219 ORTHO05D008995 1.2e-61 240.4 148 77.7
Actinidia07878 Actinidia chinensis HOM05D007219 ORTHO05D008995 2.1e-61 239.6 170 70.0
QL08p028923 Quercus lobata HOM05D007219 ORTHO05D008995 8.8e-60 234.2 342 41.2
AUR62017530 Chenopodium quinoa HOM05D007219 ORTHO05D008995 4.4e-59 231.9 255 50.2
VMungo0540G0477 Vigna mungo HOM05D007219 ORTHO05D008995 2.2e-58 229.6 201 62.7
Dinv07849 Davidia involucrata HOM05D007219 ORTHO05D008995 2.4e-57 226.1 143 76.2
Os03g0194400 Oryza sativa ssp. japonica HOM05D007219 ORTHO05D008995 5.3e-57 224.9 176 63.6
MBI16_g42309_MAGBIO Magnolia biondii HOM05D007219 ORTHO05D008995 1.0e-55 220.7 170 66.5
SGA_v2.0_scaffold73G24522 Striga asiatica HOM05D007219 ORTHO05D008995 1.0e-55 220.7 168 66.1
EL10Ac9g22747 Beta vulgaris HOM05D007219 ORTHO05D008995 1.0e-52 210.7 194 57.2
FAN02G0754 Fragaria x ananassa HOM05D007219 ORTHO05D008995 5.2e-52 208.4 200 55.5
Zm00001eb401150 Zea mays HOM05D007219 ORTHO05D008995 1.1e-49 200.7 159 60.4
Ca_16365_v3 Cicer arietinum L. HOM05D007219 ORTHO05D008995 1.6e-48 196.8 121 81.0
SMO115G0308 Selaginella moellendorffii HOM05D007219 ORTHO05D008995 3.5e-48 195.7 170 55.9
Cfa014252 Carpinus fangiana HOM05D007219 ORTHO05D008995 1.2e-45 187.2 137 65.7
Sc21g0000880 Simmondsia chinensis HOM05D007219 ORTHO05D008995 1.4e-44 183.7 110 79.1
Ah.14g082820 Amaranthus hybridus HOM05D007219 ORTHO05D008995 2.3e-44 183.0 136 64.7
ClCG02G002620 Citrullus lanatus HOM05D007219 ORTHO05D008995 8.9e-44 181.0 137 66.4
Mapoly0089s0028 Marchantia polymorpha HOM05D007219 ORTHO05D008995 1.2e-43 180.6 170 53.5
AUR62015074 Chenopodium quinoa HOM05D007219 ORTHO05D008995 3.1e-41 172.6 136 62.5
MCO15G116 Micromonas commoda HOM05D007219 ORTHO05D008995 1.9e-38 163.3 171 50.9
CBR_g31837 Chara braunii HOM05D007219 ORTHO05D008995 2.1e-37 159.8 285 36.5
Rhsim06G0172900 Rhododendron simsii HOM05D007219 ORTHO05D008995 2.6e-35 152.9 245 42.9
MD17G1111700 Malus domestica HOM05D007219 ORTHO05D008995 3.9e-31 139.0 113 62.8
SEGI_01956 Sequoiadendron giganteum HOM05D007219 ORTHO05D008995 2.8e-29 132.9 82 72.0
Nitab4.5_0002877g0050 Nicotiana tabacum HOM05D007219 ORTHO05D008995 5.8e-27 125.2 94 69.1
CSS0035148 Camellia sinensis var. sinensis HOM05D007219 ORTHO05D008995 2.3e-20 103.2 85 64.7
AagrBONN_evm.TU.Sc2ySwM_362.1409 Anthoceros agrestis HOM05D007219 ORTHO05D008995 6.4e-18 95.1 129 42.6
PRCOL_00004041 Prasinoderma coloniale HOM05D007219 ORTHO05D008995 1.4e-17 94.0 164 36.6
Thhalv10003074m.g Eutrema salsugineum HOM05D007219 ORTHO05D008995 4.6e-16 89.0 114 47.4
MD17G1111600 Malus domestica HOM05D007219 ORTHO05D008995 1.0e-15 87.8 72 59.7
Actinidia09773 Actinidia chinensis HOM05D007219 ORTHO05D008995 6.6e-15 85.1 55 72.7
Cre03.g184151 Chlamydomonas reinhardtii HOM05D007219 ORTHO05D008995 1.9e-09 67.0 95 43.2
CSS0030489 Camellia sinensis var. sinensis HOM05D007219 ORTHO05D008995 7.8e-08 61.6 36 72.2
Oeu027288.1 Olea europaea HOM05D007219 ORTHO05D008995 7.8e-08 61.6 49 61.2
CSS0021882 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.0e-07 61.2 34 76.5


User provided reference genes

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