Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.13G012200 Glycine max HOM05D007167 ORTHO05D000922 3.4e-52 208.0 101 100.0
Glyma.U007802 Glycine max HOM05D001319 ORTHO05D000922 1.4e-45 186.0 90 100.0
Thhalv10028342m.g Eutrema salsugineum HOM05D001319 ORTHO05D000922 1.3e-14 83.2 77 59.7
Lj6g0022573 Lotus japonicus HOM05D001319 ORTHO05D000922 4.8e-14 81.3 43 95.3
Lj2g0014759 Lotus japonicus HOM05D001319 ORTHO05D000922 1.8e-13 79.3 42 95.2
LjContig00006g0020595 Lotus japonicus HOM05D001319 ORTHO05D000922 1.8e-13 79.3 42 95.2
LjContig00488g0020088 Lotus japonicus HOM05D001319 ORTHO05D000922 1.8e-13 79.3 42 95.2
BcaB04g16894 Brassica carinata HOM05D001319 ORTHO05D000922 2.0e-12 75.9 54 77.8
Carub.0002s0966 Capsella rubella HOM05D001319 ORTHO05D000922 4.5e-12 74.7 50 78.0
Carub.0026s0006 Capsella rubella HOM05D001319 ORTHO05D000922 4.5e-12 74.7 50 78.0
Psat0s1917g0080 Pisum sativum HOM05D001828 ORTHO05D001745 5.9e-12 74.3 38 94.7
PGSC0003DMG400034963 Solanum tuberosum HOM05D007167 ORTHO05D000922 7.7e-12 73.9 74 56.8
PGSC0003DMG400039430 Solanum tuberosum HOM05D007167 ORTHO05D000922 7.7e-12 73.9 74 56.8
Thhalv10028274m.g Eutrema salsugineum HOM05D001319 ORTHO05D000922 1.3e-11 73.2 38 94.7
BcaC06g35655 Brassica carinata HOM05D001319 ORTHO05D000922 4.2e-10 68.2 49 73.5
Migut.O00649 Erythranthe guttata HOM05D001319 ORTHO05D000922 4.2e-10 68.2 55 70.9
BcaC03g17344 Brassica carinata HOM05D000920 ORTHO05D000922 7.2e-10 67.4 37 91.9
ScUNg0000950 Simmondsia chinensis HOM05D007167 ORTHO05D000922 1.2e-09 66.6 77 54.5
Cre14.g634322 Chlamydomonas reinhardtii HOM05D007167 ORTHO05D000922 1.6e-09 66.2 44 72.7
Cre14.g634365 Chlamydomonas reinhardtii HOM05D007167 ORTHO05D000922 1.6e-09 66.2 44 72.7
Potri.008G224111 Populus trichocarpa HOM05D007167 ORTHO05D000922 2.1e-09 65.9 40 85.0
A06p26520 Brassica napus HOM05D007167 ORTHO05D000922 2.7e-09 65.5 34 94.1
MELO3C027007.2 Cucumis melo HOM05D007167 ORTHO05D000922 2.7e-09 65.5 79 53.2
Manes.S024416 Manihot esculenta HOM05D001319 ORTHO05D000922 2.7e-09 65.5 41 82.9
Manes.S030952 Manihot esculenta HOM05D001319 ORTHO05D000922 2.7e-09 65.5 41 82.9
Manes.S055616 Manihot esculenta HOM05D001319 ORTHO05D000922 2.7e-09 65.5 41 82.9
Potri.008G224701 Populus trichocarpa HOM05D007167 ORTHO05D000922 2.7e-09 65.5 37 89.2
Sopen00g004060 Solanum pennellii HOM05D001828 ORTHO05D001745 2.7e-09 65.5 45 77.8
Sc14g0003770 Simmondsia chinensis HOM05D007167 ORTHO05D001070 3.6e-09 65.1 39 84.6
Sc14g0003870 Simmondsia chinensis HOM05D007167 ORTHO05D013628 3.6e-09 65.1 39 84.6
Sc14g0003940 Simmondsia chinensis HOM05D007167 ORTHO05D013628 3.6e-09 65.1 39 84.6
Sc14g0004250 Simmondsia chinensis HOM05D007167 ORTHO05D013628 3.6e-09 65.1 39 84.6
Sc14g0004350 Simmondsia chinensis HOM05D007167 ORTHO05D001679 3.6e-09 65.1 39 84.6
ScUNg0000050 Simmondsia chinensis HOM05D007167 ORTHO05D000922 3.6e-09 65.1 39 84.6
ScUNg0000170 Simmondsia chinensis HOM05D007167 ORTHO05D000922 3.6e-09 65.1 39 84.6
ScUNg0000250 Simmondsia chinensis HOM05D007167 ORTHO05D013628 3.6e-09 65.1 39 84.6
ScUNg0000310 Simmondsia chinensis HOM05D007167 ORTHO05D001679 3.6e-09 65.1 39 84.6
ScUNg0000440 Simmondsia chinensis HOM05D013320 ORTHO05D000922 3.6e-09 65.1 39 84.6
ScUNg0000510 Simmondsia chinensis HOM05D007167 ORTHO05D000922 3.6e-09 65.1 39 84.6
ScUNg0000660 Simmondsia chinensis HOM05D007167 ORTHO05D001679 3.6e-09 65.1 39 84.6
ScUNg0000690 Simmondsia chinensis HOM05D007167 ORTHO05D001679 3.6e-09 65.1 39 84.6
ScUNg0000730 Simmondsia chinensis HOM05D007167 ORTHO05D001679 3.6e-09 65.1 39 84.6
ScUNg0000780 Simmondsia chinensis HOM05D007167 ORTHO05D013628 3.6e-09 65.1 39 84.6
ScUNg0001240 Simmondsia chinensis HOM05D007167 ORTHO05D001679 3.6e-09 65.1 39 84.6
ScUNg0001280 Simmondsia chinensis HOM05D007167 ORTHO05D001679 3.6e-09 65.1 39 84.6
ScUNg0001330 Simmondsia chinensis HOM05D007167 ORTHO05D013628 3.6e-09 65.1 39 84.6
ScUNg0001370 Simmondsia chinensis HOM05D007167 ORTHO05D001679 3.6e-09 65.1 39 84.6
ScUNg0001420 Simmondsia chinensis HOM05D007167 ORTHO05D001679 3.6e-09 65.1 39 84.6
Manes.S008829 Manihot esculenta HOM05D007167 ORTHO05D000922 1.0e-08 63.5 40 82.5
Manes.S055516 Manihot esculenta HOM05D007167 ORTHO05D000922 1.0e-08 63.5 40 82.5
Manes.S056016 Manihot esculenta HOM05D007167 ORTHO05D000922 1.0e-08 63.5 40 82.5
Cpa.g.sc0.66 Carica papaya HOM05D007167 ORTHO05D000922 1.4e-08 63.2 51 68.6
BcaNung07382 Brassica carinata HOM05D000920 ORTHO05D000922 1.8e-08 62.8 43 76.7
unitig_813.g34371 Utricularia gibba HOM05D007167 ORTHO05D000922 1.8e-08 62.8 38 81.6
ScUNg0001100 Simmondsia chinensis HOM05D007167 ORTHO05D000922 2.3e-08 62.4 35 88.6
Sopen00g007010 Solanum pennellii HOM05D007167 ORTHO05D000922 5.2e-08 61.2 35 88.6
CiPaw.15G104600 Carya illinoinensis HOM05D001319 ORTHO05D000922 8.8e-08 60.5 35 85.7
CiPaw.15G105500 Carya illinoinensis HOM05D001319 ORTHO05D000922 8.8e-08 60.5 35 85.7
Phvul.003G090301 Phaseolus vulgaris HOM05D001319 ORTHO05D000922 1.5e-07 59.7 51 66.7
CiPaw.15G100800 Carya illinoinensis HOM05D001319 ORTHO05D000922 3.3e-07 58.5 36 80.6
BNapus_Darmor_BZH_scaffold_107p00080 Brassica napus HOM05D007167 ORTHO05D000922 7.5e-07 57.4 30 93.3
Migut.A01243 Erythranthe guttata HOM05D001319 ORTHO05D000922 9.7e-07 57.0 34 85.3
Phvul.002G055500 Phaseolus vulgaris HOM05D007167 ORTHO05D000922 1.3e-06 56.6 30 96.7
EL10Ac4g08190 Beta vulgaris HOM05D007167 ORTHO05D000922 1.7e-06 56.2 31 90.3
A06p25010 Brassica napus HOM05D007167 ORTHO05D000922 2.8e-06 55.5 33 81.8
PGSC0003DMG400043107 Solanum tuberosum HOM05D007167 ORTHO05D000922 2.8e-06 55.5 34 82.4
A01p26880 Brassica napus HOM05D000920 ORTHO05D010211 8.2e-06 53.9 28 92.9
A09p30830 Brassica napus HOM05D000920 ORTHO05D010211 8.2e-06 53.9 28 92.9
BNapus_Darmor_BZH_scaffold_107p00090 Brassica napus HOM05D000920 ORTHO05D010211 8.2e-06 53.9 28 92.9


User provided reference genes

Program Settings