Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.13G010600 Glycine max HOM05D000913 ORTHO05D000687 1.7e-54 215.7 105 100.0
Medtr3g082210 Medicago truncatula HOM05D000913 ORTHO05D000687 9.5e-13 77.0 93 50.5
Medtr1g041690 Medicago truncatula HOM05D000913 ORTHO05D000687 1.6e-12 76.3 95 49.5
Medtr3g082250 Medicago truncatula HOM05D000913 ORTHO05D000687 4.7e-12 74.7 91 49.5
Medtr3g082260 Medicago truncatula HOM05D000913 ORTHO05D000687 3.0e-11 72.0 95 48.4
Oeu040052.1 Olea europaea HOM05D000913 ORTHO05D000687 4.0e-11 71.6 93 41.9
TPR.G27426 Trifolium pratense HOM05D000913 ORTHO05D000687 4.0e-11 71.6 95 50.5
TPR.G33738 Trifolium pratense HOM05D000913 ORTHO05D000687 4.0e-11 71.6 91 50.5
TWI36G1096 Tripterygium wilfordii HOM05D000913 ORTHO05D000687 4.0e-11 71.6 88 51.1
Dinv05335 Davidia involucrata HOM05D000913 ORTHO05D000687 5.2e-11 71.2 94 48.9
DCAR_021079 Daucus carota HOM05D000913 ORTHO05D000687 1.2e-10 70.1 103 37.9
MSTRG.15033 Avicennia marina HOM05D000913 ORTHO05D000687 1.7e-09 66.2 99 43.4
Ca_27958_v3 Cicer arietinum L. HOM05D000913 ORTHO05D000687 1.7e-09 66.2 99 43.4
DCAR_008755 Daucus carota HOM05D000913 ORTHO05D000687 3.7e-09 65.1 97 44.3
MBI14_g17948_MAGBIO Magnolia biondii HOM05D000913 ORTHO05D000687 4.9e-09 64.7 93 40.9
Dinv05336 Davidia involucrata HOM05D000913 ORTHO05D000687 6.3e-09 64.3 90 47.8
Thecc.01G201000 Theobroma cacao HOM05D000913 ORTHO05D000687 6.3e-09 64.3 95 48.4
TWI36G0980 Tripterygium wilfordii HOM05D000913 ORTHO05D000687 6.3e-09 64.3 91 44.0
TWI36G1369 Tripterygium wilfordii HOM05D000913 ORTHO05D000687 8.3e-09 63.9 88 45.5
Medtr5g007070 Medicago truncatula HOM05D000913 ORTHO05D000687 1.1e-08 63.5 58 56.9
CiPaw.10G022900 Carya illinoinensis HOM05D000913 ORTHO05D000687 1.8e-08 62.8 96 40.6
Gohir.A07G162700 Gossypium hirsutum HOM05D000913 ORTHO05D000687 3.1e-08 62.0 95 46.3
Gorai.001G189300 Gossypium raimondii HOM05D000913 ORTHO05D000687 3.1e-08 62.0 95 45.3
Ciclev10018068m.g Citrus clementina HOM05D000913 ORTHO05D000687 5.4e-08 61.2 104 39.4
FvH4_6g40280 Fragaria vesca HOM05D000913 ORTHO05D000687 5.4e-08 61.2 103 37.9
FAN14G2134 Fragaria x ananassa HOM05D000913 ORTHO05D000687 5.4e-08 61.2 103 37.9
Gohir.D07G169300 Gossypium hirsutum HOM05D000913 ORTHO05D000687 7.0e-08 60.8 95 44.2
Sabra01G0038000 Salix brachista HOM05D000913 ORTHO05D000687 9.2e-08 60.5 91 42.9
Ciclev10017001m.g Citrus clementina HOM05D000913 ORTHO05D000687 1.2e-07 60.1 97 43.3
FAN09G0650 Fragaria x ananassa HOM05D000913 ORTHO05D000687 1.2e-07 60.1 103 38.8
CiPaw.10G023100 Carya illinoinensis HOM05D000913 ORTHO05D000687 1.6e-07 59.7 72 45.8
DCAR_019659 Daucus carota HOM05D000913 ORTHO05D000687 1.6e-07 59.7 101 40.6
Gohir.D11G154200 Gossypium hirsutum HOM05D000913 ORTHO05D000687 1.6e-07 59.7 96 45.8
Gorai.007G164300 Gossypium raimondii HOM05D000913 ORTHO05D000687 1.6e-07 59.7 96 45.8
Prupe.3G193500 Prunus persica HOM05D000913 ORTHO05D000687 1.6e-07 59.7 97 47.4
GSVIVG01026843001 Vitis vinifera HOM05D000913 ORTHO05D000687 1.6e-07 59.7 74 45.9
RcHm_v2.0_Chr2g0155451 Rosa chinensis HOM05D000913 ORTHO05D000687 2.0e-07 59.3 110 40.9
Duzib133G0202 Durio zibethinus HOM05D000913 ORTHO05D000687 2.7e-07 58.9 91 46.2
Potri.014G171500 Populus trichocarpa HOM05D000913 ORTHO05D000687 2.7e-07 58.9 95 41.1
CSS0009010 Camellia sinensis var. sinensis HOM05D000913 ORTHO05D000687 3.5e-07 58.5 109 42.2
Duzib138G1828 Durio zibethinus HOM05D000913 ORTHO05D000687 4.5e-07 58.2 98 44.9
Aqoxy4G01739 Aquilegia oxysepala HOM05D000913 ORTHO05D000687 5.9e-07 57.8 91 41.8
CiPaw.03G195900 Carya illinoinensis HOM05D000913 ORTHO05D000687 7.7e-07 57.4 103 41.7
Duzib211G0303 Durio zibethinus HOM05D000913 ORTHO05D000687 7.7e-07 57.4 99 42.4
Manes.13G059500 Manihot esculenta HOM05D000913 ORTHO05D000687 7.7e-07 57.4 94 42.6
Nitab4.5_0002251g0110 Nicotiana tabacum HOM05D000913 ORTHO05D000687 7.7e-07 57.4 102 35.3
Psat5g105760 Pisum sativum HOM05D000913 ORTHO05D000687 7.7e-07 57.4 98 40.8
TWI75G1832 Tripterygium wilfordii HOM05D000913 ORTHO05D000687 7.7e-07 57.4 93 46.2
Duzib138G1006 Durio zibethinus HOM05D000913 ORTHO05D000687 1.0e-06 57.0 98 44.9
RcHm_v2.0_Chr2g0155471 Rosa chinensis HOM05D000913 ORTHO05D000687 1.0e-06 57.0 98 39.8
Duzib138G1373 Durio zibethinus HOM05D000913 ORTHO05D000687 1.3e-06 56.6 98 43.9
Potri.014G171300 Populus trichocarpa HOM05D000913 ORTHO05D000687 1.3e-06 56.6 95 40.0
Cc05_g09770 Coffea canephora HOM05D000913 ORTHO05D000687 1.7e-06 56.2 107 38.3
Lsat_1_v5_gn_7_98700 Lactuca sativa HOM05D000913 ORTHO05D000687 1.7e-06 56.2 74 48.6
Nitab4.5_0006767g0020 Nicotiana tabacum HOM05D000913 ORTHO05D000687 1.7e-06 56.2 102 35.3
Prupe.3G193600 Prunus persica HOM05D000913 ORTHO05D000687 1.7e-06 56.2 89 39.3
Sopen12g006510 Solanum pennellii HOM05D000913 ORTHO05D000687 1.7e-06 56.2 84 36.9
DCAR_015686 Daucus carota HOM05D000913 ORTHO05D000687 2.3e-06 55.8 94 39.4
ECA236G3674 Erigeron canadensis HOM05D000913 ORTHO05D000687 2.3e-06 55.8 63 54.0
Potri.009G048100 Populus trichocarpa HOM05D000913 ORTHO05D000687 2.3e-06 55.8 92 44.6
Cc05_g09760 Coffea canephora HOM05D000913 ORTHO05D000687 2.9e-06 55.5 108 38.9
Nitab4.5_0002919g0010 Nicotiana tabacum HOM05D000913 ORTHO05D000687 3.8e-06 55.1 83 36.1
MBI14_g16764_MAGBIO Magnolia biondii HOM05D000913 ORTHO05D000687 5.0e-06 54.7 78 43.6
MBI14_g48110_MAGBIO Magnolia biondii HOM05D000913 ORTHO05D000687 5.0e-06 54.7 78 43.6
Nn7g37142 Nelumbo nucifera HOM05D000913 ORTHO05D000687 6.6e-06 54.3 106 35.8
Nitab4.5_0003051g0020 Nicotiana tabacum HOM05D000913 ORTHO05D000687 6.6e-06 54.3 106 34.9
QL04p075609 Quercus lobata HOM05D000913 ORTHO05D000687 6.6e-06 54.3 90 41.1
GSVIVG01030135001 Vitis vinifera HOM05D000913 ORTHO05D000687 6.6e-06 54.3 94 40.4
DCAR_021080 Daucus carota HOM05D000913 ORTHO05D000687 8.6e-06 53.9 93 40.9
Lsat_1_v5_gn_7_98660 Lactuca sativa HOM05D000913 ORTHO05D000687 8.6e-06 53.9 74 47.3
vmacro12050 Vaccinium macrocarpon HOM05D000913 ORTHO05D000687 8.6e-06 53.9 71 46.5
vmacro12051 Vaccinium macrocarpon HOM05D000913 ORTHO05D000687 8.6e-06 53.9 105 40.0


User provided reference genes

Program Settings