Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.13G010200 Glycine max HOM05D006836 ORTHO05D008691 6.1e-216 753.8 366 100.0
Glyma.20G060000 Glycine max HOM05D006836 ORTHO05D008691 2.2e-194 682.2 367 92.4
Phvul.L001691 Phaseolus vulgaris HOM05D006836 ORTHO05D008691 5.8e-150 534.6 333 81.7
VMungo0647G0281 Vigna mungo HOM05D006836 ORTHO05D008691 4.6e-147 525.0 334 81.4
Lj6g0007987 Lotus japonicus HOM05D006836 ORTHO05D008691 2.1e-139 499.6 332 74.7
Lalb_Chr10g0094621 Lupinus albus HOM05D006836 ORTHO05D008691 2.3e-130 469.5 345 69.6
Ca_16339_v3 Cicer arietinum L. HOM05D006836 ORTHO05D008691 5.4e-124 448.4 343 67.1
arahy.Tifrunner.gnm1.ann1.GSTV0Y Arachis hypogaea HOM05D006836 ORTHO05D008691 1.6e-123 446.8 342 67.5
arahy.Tifrunner.gnm1.ann1.M09JG2 Arachis hypogaea HOM05D006836 ORTHO05D008691 7.9e-123 444.5 342 67.5
TPR.G16170 Trifolium pratense HOM05D006836 ORTHO05D008691 3.9e-122 442.2 340 66.8
Psat5g104760 Pisum sativum HOM05D006836 ORTHO05D008691 2.8e-120 436.0 340 66.5
Dinv21313 Davidia involucrata HOM05D006836 ORTHO05D008691 1.2e-118 430.6 341 65.7
QL04p067653 Quercus lobata HOM05D006836 ORTHO05D008691 9.3e-116 421.0 337 65.9
CiPaw.03G283000 Carya illinoinensis HOM05D006836 ORTHO05D008691 1.2e-115 420.6 339 62.8
TAR629G0496 Trochodendron aralioides HOM05D006836 ORTHO05D008691 7.9e-115 417.9 336 63.4
Duzib133G0147 Durio zibethinus HOM05D006836 ORTHO05D008691 6.7e-114 414.8 343 62.1
Rhsim06G0178100 Rhododendron simsii HOM05D006836 ORTHO05D008691 1.9e-113 413.3 252 77.0
Thecc.01G198300 Theobroma cacao HOM05D006836 ORTHO05D008691 3.3e-113 412.5 343 62.1
Manes.13G060700 Manihot esculenta HOM05D006836 ORTHO05D008691 5.6e-113 411.8 342 61.1
Cfa014210 Carpinus fangiana HOM05D006836 ORTHO05D008691 1.1e-111 407.5 370 60.3
Solyc07g045300.4 Solanum lycopersicum HOM05D006836 ORTHO05D008691 2.4e-111 406.4 336 62.5
CSS0020520 Camellia sinensis var. sinensis HOM05D006836 ORTHO05D008691 9.0e-111 404.4 254 75.2
Gorai.001G223100 Gossypium raimondii HOM05D006836 ORTHO05D008691 9.0e-111 404.4 305 65.9
Gohir.A07G192900 Gossypium hirsutum HOM05D006836 ORTHO05D008691 1.5e-110 403.7 272 71.7
Actinidia09801 Actinidia chinensis HOM05D006836 ORTHO05D008691 2.0e-110 403.3 294 67.3
RcHm_v2.0_Chr2g0155731 Rosa chinensis HOM05D006836 ORTHO05D008691 2.6e-110 402.9 350 61.4
vmacro12068 Vaccinium macrocarpon HOM05D006836 ORTHO05D008691 2.6e-110 402.9 255 76.1
Medtr3g082680 Medicago truncatula HOM05D006836 ORTHO05D008691 4.5e-110 402.1 231 82.3
Gohir.D07G199300 Gossypium hirsutum HOM05D006836 ORTHO05D008691 7.6e-110 401.4 272 71.0
GSVIVG01030118001 Vitis vinifera HOM05D006836 ORTHO05D008691 1.3e-109 400.6 338 62.1
Nitab4.5_0004852g0030 Nicotiana tabacum HOM05D006836 ORTHO05D008691 2.2e-109 399.8 281 67.6
Aqoxy1G03080 Aquilegia oxysepala HOM05D006836 ORTHO05D008691 3.8e-109 399.1 329 62.6
Sopen07g023830 Solanum pennellii HOM05D006836 ORTHO05D008691 3.8e-109 399.1 253 73.9
DCAR_012739 Daucus carota HOM05D006836 ORTHO05D008691 6.5e-109 398.3 255 72.5
Ciclev10015848m.g Citrus clementina HOM05D006836 ORTHO05D008691 1.1e-108 397.5 254 75.6
MD09G1129600 Malus domestica HOM05D006836 ORTHO05D008691 2.5e-108 396.4 344 60.8
PSO675G1370 Papaver somniferum HOM05D006836 ORTHO05D008691 2.5e-108 396.4 242 76.0
Nn1g07540 Nelumbo nucifera HOM05D006836 ORTHO05D008691 4.2e-108 395.6 290 65.9
PSO541G5262 Papaver somniferum HOM05D006836 ORTHO05D008691 4.2e-108 395.6 242 75.6
MBI14_g24036_MAGBIO Magnolia biondii HOM05D006836 ORTHO05D008691 7.1e-108 394.8 240 76.7
Oeu037218.2 Olea europaea HOM05D000879 ORTHO05D008691 9.3e-108 394.4 232 77.6
PGSC0003DMG400017381 Solanum tuberosum HOM05D006836 ORTHO05D008691 1.6e-107 393.7 253 73.1
ClCG02G009110 Citrullus lanatus HOM05D006836 ORTHO05D008691 2.1e-107 393.3 251 74.5
Potri.014G169200 Populus trichocarpa HOM05D006836 ORTHO05D008691 7.9e-107 391.3 275 68.4
CANSAT64G2876 Cannabis sativa HOM05D006836 ORTHO05D008691 1.8e-106 390.2 252 72.6
Haze_12601 Corylus avellana HOM05D006836 ORTHO05D008691 2.3e-106 389.8 389 58.1
Eucgr.K01397 Eucalyptus grandis HOM05D006836 ORTHO05D008691 8.2e-104 381.3 250 69.2
PGR031G1777 Punica granatum HOM05D006836 ORTHO05D008691 1.5e-102 377.1 318 59.1
Hund15463 Selenicereus undatus HOM05D006836 ORTHO05D008691 5.9e-102 375.2 361 56.2
Migut.M00056 Erythranthe guttata HOM05D006836 ORTHO05D008691 8.5e-101 371.3 236 72.5
AUR62014994 Chenopodium quinoa HOM05D006836 ORTHO05D008691 1.1e-100 370.9 242 71.9
Zm00001eb176810 Zea mays HOM05D006836 ORTHO05D008691 4.2e-100 369.0 233 72.5
SGA_v2.0_scaffold73G24492 Striga asiatica HOM05D006836 ORTHO05D008691 1.2e-99 367.5 235 72.3
THA.LOC104808842 Tarenaya hassleriana HOM05D006836 ORTHO05D008691 4.6e-99 365.5 262 63.7
SEGI_40154 Sequoiadendron giganteum HOM05D006836 ORTHO05D008691 6.1e-99 365.2 257 65.4
MSTRG.14912 Avicennia marina HOM05D006836 ORTHO05D008691 1.0e-98 364.4 236 69.5
Sed0023251 Sechium edule HOM05D006836 ORTHO05D008691 1.0e-98 364.4 227 74.0
C07p10290 Brassica napus HOM05D006836 ORTHO05D008691 4.3e-97 359.0 314 55.4
BcaB06g26781 Brassica carinata HOM05D006836 ORTHO05D008691 7.4e-97 358.2 312 58.0
BraA07t28465Z Brassica rapa HOM05D006836 ORTHO05D008691 1.3e-96 357.5 270 61.9
BcaC06g35865 Brassica carinata HOM05D006836 ORTHO05D008691 1.6e-96 357.1 322 54.7
BolC7t41479H Brassica oleracea HOM05D006836 ORTHO05D008691 1.6e-96 357.1 322 54.7
Sp3g23200 Schrenkiella parvula HOM05D006836 ORTHO05D008691 1.6e-96 357.1 325 55.4
Os08g0345400 Oryza sativa ssp. japonica HOM05D006836 ORTHO05D008691 2.2e-96 356.7 231 70.1
TWI75G1319 Tripterygium wilfordii HOM05D006836 ORTHO05D008691 2.2e-96 356.7 234 72.6
Carub.0003s2604 Capsella rubella HOM05D006836 ORTHO05D008691 8.2e-96 354.8 279 60.9
CARHR102220 Cardamine hirsuta HOM05D006836 ORTHO05D008691 8.2e-96 354.8 264 62.9
EL10Ac9g22661 Beta vulgaris HOM05D006836 ORTHO05D008691 1.8e-95 353.6 238 69.7
AL3G42030 Arabidopsis lyrata HOM05D006836 ORTHO05D008691 2.4e-95 353.2 259 64.5
A07p06710 Brassica napus HOM05D006836 ORTHO05D008691 2.4e-95 353.2 270 60.7
Nitab4.5_0005354g0030 Nicotiana tabacum HOM05D006836 ORTHO05D008691 9.0e-95 351.3 281 61.9
Sabra14G0129000 Salix brachista HOM05D006836 ORTHO05D008691 9.0e-95 351.3 363 52.3
Thhalv10002607m.g Eutrema salsugineum HOM05D006836 ORTHO05D008691 2.0e-94 350.1 323 55.4
FvH4_6g40480 Fragaria vesca HOM05D006836 ORTHO05D008691 2.0e-94 350.1 303 59.7
Peaxi162Scf00612g00142 Petunia axillaris HOM05D006836 ORTHO05D008691 7.7e-94 348.2 280 61.4
FAN10G4054 Fragaria x ananassa HOM05D006836 ORTHO05D008691 1.4e-92 344.0 369 52.0
FAN14G0130 Fragaria x ananassa HOM05D006836 ORTHO05D008691 1.4e-92 344.0 369 52.0
COL.COLO4_19642 Corchorus olitorius HOM05D006836 ORTHO05D008691 7.2e-92 341.7 296 61.8
Ah.01g002500 Amaranthus hybridus HOM05D006836 ORTHO05D008691 1.2e-91 340.9 214 73.8
ATR0751G245 Amborella trichopoda HOM05D006836 ORTHO05D008691 1.2e-91 340.9 217 71.0
Cc00_g01020 Coffea canephora HOM05D006836 ORTHO05D008691 2.1e-91 340.1 226 68.1
Lj8A137G50 Lonicera japonica HOM05D006836 ORTHO05D008691 2.3e-90 336.7 207 76.8
AUR62029127 Chenopodium quinoa HOM05D006836 ORTHO05D008691 3.7e-88 329.3 216 70.8
Lsat_1_v5_gn_7_97361 Lactuca sativa HOM05D006836 ORTHO05D008691 8.2e-88 328.2 330 51.8
CsaV3_6G009720 Cucumis sativus L. HOM05D006836 ORTHO05D008691 2.5e-84 316.6 194 75.8
HanXRQChr11g0329431 Helianthus annuus HOM05D006836 ORTHO05D008691 1.8e-82 310.5 332 50.3
unitig_62.g23534 Utricularia gibba HOM05D000211 ORTHO05D002682 1.5e-81 307.4 214 65.0
ECA236G0162 Erigeron canadensis HOM05D006836 ORTHO05D008691 1.2e-78 297.7 209 68.4
Cpa.g.sc136.39 Carica papaya HOM05D006836 ORTHO05D008691 2.9e-77 293.1 346 49.1
MELO3C025942.2 Cucumis melo HOM05D006836 ORTHO05D008691 1.9e-76 290.4 275 57.8
CDE10G1136 Ceratophyllum demersum HOM05D006836 ORTHO05D008691 1.2e-73 281.2 174 71.8
AagrBONN_evm.TU.Sc2ySwM_117.1494 Anthoceros agrestis HOM05D006836 ORTHO05D008691 7.0e-71 271.9 227 55.5
Sc21g0000470 Simmondsia chinensis HOM05D006836 ORTHO05D008691 3.5e-70 269.6 170 72.9
Mapoly0098s0007 Marchantia polymorpha HOM05D006836 ORTHO05D008691 5.9e-70 268.9 230 55.7
Pp3c23_16310 Physcomitrium patens HOM05D006836 ORTHO05D008691 5.0e-69 265.8 253 50.2
AT2G04360 Arabidopsis thaliana HOM05D006836 ORTHO05D008691 7.2e-68 261.9 212 59.9
FAN02G3194 Fragaria x ananassa HOM05D006836 ORTHO05D008691 5.2e-66 255.8 247 57.1
Prupe.3G195700 Prunus persica HOM05D006836 ORTHO05D008691 2.0e-65 253.8 235 59.6
SMO270G0068 Selaginella moellendorffii HOM05D006836 ORTHO05D008691 1.3e-64 251.1 224 50.0
Haze_12612 Corylus avellana HOM05D006836 ORTHO05D008691 8.3e-64 248.4 263 55.5
MD17G1118400 Malus domestica HOM05D006836 ORTHO05D008691 1.0e-61 241.5 244 52.9
MD07G1016400 Malus domestica HOM05D006836 ORTHO05D008691 1.3e-61 241.1 230 55.2
Aa31sc202G50 Aethionema arabicum HOM05D006836 ORTHO05D008691 3.6e-59 233.0 222 52.7
Cre05.g234750 Chlamydomonas reinhardtii HOM05D006836 ORTHO05D008691 2.7e-46 190.3 235 42.1
CBR_g3513 Chara braunii HOM05D006836 ORTHO05D000407 1.2e-38 164.9 209 38.3
FAN05G5431 Fragaria x ananassa HOM05D006836 ORTHO05D008691 2.0e-38 164.1 109 68.8
FAN09G0369 Fragaria x ananassa HOM05D006836 ORTHO05D008691 1.0e-37 161.8 109 67.9
HPP92_003030 Vanilla planifolia HOM05D006836 ORTHO05D008691 1.7e-37 161.0 203 43.8
SEGI_21977 Sequoiadendron giganteum HOM05D006836 ORTHO05D008691 3.1e-34 150.2 211 43.1
HPP92_003031 Vanilla planifolia HOM05D006836 ORTHO05D008691 6.0e-30 136.0 97 59.8
PRCOL_00003549 Prasinoderma coloniale HOM05D006836 ORTHO05D008691 5.1e-21 106.3 167 38.3
arahy.Tifrunner.gnm1.ann1.FY93PX Arachis hypogaea HOM05D006836 ORTHO05D000230 8.4e-16 89.0 47 80.9
Hma1.2p1_0599F.1_g187040 Hydrangea macrophylla HOM05D006836 ORTHO05D008691 3.9e-13 80.1 157 41.4
Haze_12595 Corylus avellana HOM05D006836 ORTHO05D008691 2.8e-11 73.9 50 72.0
Oeu037217.1 Olea europaea HOM05D006836 ORTHO05D049434 5.8e-09 66.2 152 32.2
Oeu037216.1 Olea europaea HOM05D006836 ORTHO05D049434 2.2e-08 64.3 152 31.6


User provided reference genes

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