Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.13G004200 Glycine max HOM05D006473 ORTHO05D008108 8.9e-142 506.9 253 100.0
Glyma.20G063000 Glycine max HOM05D006473 ORTHO05D008108 1.2e-77 293.9 170 88.2
Lj6g0005292 Lotus japonicus HOM05D006473 ORTHO05D008108 6.3e-71 271.6 165 83.0
Phvul.007G120134 Phaseolus vulgaris HOM05D006473 ORTHO05D008108 7.0e-70 268.1 165 83.0
VMungo0540G0033 Vigna mungo HOM05D006473 ORTHO05D008108 1.1e-67 260.8 158 84.8
TPR.G17559 Trifolium pratense HOM05D006473 ORTHO05D008108 1.8e-65 253.4 184 71.7
Medtr3g082070 Medicago truncatula HOM05D006473 ORTHO05D008108 6.3e-63 245.0 159 79.9
Psat5g106240 Pisum sativum HOM05D006473 ORTHO05D008108 8.5e-60 234.6 160 76.2
Lalb_Chr17g0337141 Lupinus albus HOM05D006473 ORTHO05D008108 8.0e-50 201.4 236 53.4
arahy.Tifrunner.gnm1.ann1.UN21ID Arachis hypogaea HOM05D006473 ORTHO05D008108 2.3e-49 199.9 163 68.1
arahy.Tifrunner.gnm1.ann1.ITU10B Arachis hypogaea HOM05D006473 ORTHO05D008108 3.0e-49 199.5 163 68.1
Ca_16320_v3 Cicer arietinum L. HOM05D006473 ORTHO05D008108 9.8e-48 194.5 146 67.8
Duzib138G0874 Durio zibethinus HOM05D006473 ORTHO05D008108 4.4e-40 169.1 169 53.8
Gohir.D11G162300 Gossypium hirsutum HOM05D006473 ORTHO05D008108 9.8e-40 167.9 183 49.7
RcHm_v2.0_Chr2g0153221 Rosa chinensis HOM05D006473 ORTHO05D008108 9.8e-40 167.9 185 53.0
FAN05G1961 Fragaria x ananassa HOM05D006473 ORTHO05D008108 1.3e-39 167.5 173 54.9
Gorai.007G172600 Gossypium raimondii HOM05D006473 ORTHO05D008108 1.3e-39 167.5 183 49.7
Haze_13544 Corylus avellana HOM05D006473 ORTHO05D008108 6.4e-39 165.2 164 54.3
Gohir.A11G155300 Gossypium hirsutum HOM05D006473 ORTHO05D008108 6.4e-39 165.2 183 48.6
Cfa023365 Carpinus fangiana HOM05D006473 ORTHO05D008108 3.2e-38 162.9 164 53.7
CiPaw.03G109100 Carya illinoinensis HOM05D006473 ORTHO05D008108 3.2e-38 162.9 157 55.4
CsaV3_4G032520 Cucumis sativus L. HOM05D006473 ORTHO05D008108 3.2e-38 162.9 175 54.3
MELO3C026363.2 Cucumis melo HOM05D006473 ORTHO05D008108 5.4e-38 162.2 170 54.1
Prupe.3G184300 Prunus persica HOM05D006473 ORTHO05D008108 9.2e-38 161.4 170 52.9
ClCG11G016910 Citrullus lanatus HOM05D006473 ORTHO05D008108 2.0e-37 160.2 167 55.1
FvH4_6g39300 Fragaria vesca HOM05D006473 ORTHO05D008108 3.5e-37 159.5 173 53.8
Thecc.01G174700 Theobroma cacao HOM05D006473 ORTHO05D008108 3.5e-37 159.5 177 50.3
Sed0027280 Sechium edule HOM05D006473 ORTHO05D008108 7.8e-37 158.3 166 53.0
MD09G1143500 Malus domestica HOM05D006473 ORTHO05D008108 1.7e-36 157.1 160 58.1
COL.COLO4_19989 Corchorus olitorius HOM05D006473 ORTHO05D008108 8.6e-36 154.8 172 50.6
FAN09G0937 Fragaria x ananassa HOM05D006473 ORTHO05D008108 8.6e-36 154.8 182 52.2
FAN14G2613 Fragaria x ananassa HOM05D006473 ORTHO05D008108 8.6e-36 154.8 182 52.2
MD17G1129800 Malus domestica HOM05D006473 ORTHO05D008108 1.1e-35 154.5 187 50.8
COL.COLO4_18222 Corchorus olitorius HOM05D006473 ORTHO05D008108 8.0e-34 148.3 174 49.4
CANSAT64G1482 Cannabis sativa HOM05D006473 ORTHO05D008108 1.4e-33 147.5 164 54.3
Sabra06G0006200 Salix brachista HOM05D006473 ORTHO05D008108 2.3e-33 146.7 174 50.0
CiPaw.04G072200 Carya illinoinensis HOM05D006473 ORTHO05D008108 1.2e-32 144.4 160 51.2
Atru.chr8.1011 Acer truncatum HOM05D006473 ORTHO05D008108 4.4e-32 142.5 148 53.4
PGR031G0759 Punica granatum HOM05D006473 ORTHO05D008108 7.5e-32 141.7 164 54.3
Ciclev10012907m.g Citrus clementina HOM05D006473 ORTHO05D008108 2.2e-31 140.2 144 56.2
Sed0014549 Sechium edule HOM05D006473 ORTHO05D008108 2.9e-31 139.8 173 50.9
Haze_13545 Corylus avellana HOM05D006473 ORTHO05D008108 6.4e-31 138.7 132 56.1
TWI34G1686 Tripterygium wilfordii HOM05D006473 ORTHO05D008108 8.3e-31 138.3 174 49.4
Manes.08G068100 Manihot esculenta HOM05D006473 ORTHO05D008108 1.1e-30 137.9 156 48.7
Potri.006G008000 Populus trichocarpa HOM05D006473 ORTHO05D008108 4.1e-30 136.0 168 48.8
QL07p025679 Quercus lobata HOM05D006473 ORTHO05D008108 1.2e-26 124.4 176 47.7
QL10p019398 Quercus lobata HOM05D006473 ORTHO05D008108 1.4e-25 120.9 171 46.2
QL07p026949 Quercus lobata HOM05D006473 ORTHO05D008108 1.2e-24 117.9 184 45.1
QL07p027003 Quercus lobata HOM05D006473 ORTHO05D008108 5.8e-24 115.5 183 44.3
Cpa.g.sc8.265 Carica papaya HOM05D006473 ORTHO05D008108 2.2e-23 113.6 185 42.7
QL04p064817 Quercus lobata HOM05D006473 ORTHO05D008108 3.7e-23 112.8 160 46.9
Eucgr.A00949 Eucalyptus grandis HOM05D006473 ORTHO05D008108 4.9e-23 112.5 165 44.8
Sabra16G0000300 Salix brachista HOM05D006473 ORTHO05D008108 4.9e-23 112.5 169 40.8
Sp7g13370 Schrenkiella parvula HOM05D006473 ORTHO05D008108 4.9e-23 112.5 162 48.1
Peaxi162Scf00322g00416 Petunia axillaris HOM05D006473 ORTHO05D008108 9.2e-22 108.2 161 44.7
CARHR221880 Cardamine hirsuta HOM05D006473 ORTHO05D008108 1.2e-21 107.8 174 43.7
BcaB02g07838 Brassica carinata HOM05D006473 ORTHO05D008108 1.6e-21 107.5 162 45.1
THA.LOC104808506 Tarenaya hassleriana HOM05D006473 ORTHO05D008108 2.7e-21 106.7 169 45.0
BraA05t20604Z Brassica rapa HOM05D006473 ORTHO05D008108 3.5e-21 106.3 170 45.9
TAR626G1390 Trochodendron aralioides HOM05D006473 ORTHO05D008108 6.0e-21 105.5 155 43.2
A05p16970 Brassica napus HOM05D006473 ORTHO05D008108 7.8e-21 105.1 172 44.8
A08p11670 Brassica napus HOM05D006473 ORTHO05D008108 7.8e-21 105.1 167 45.5
BraA08t33161Z Brassica rapa HOM05D006473 ORTHO05D008108 7.8e-21 105.1 167 45.5
BcaC07g37876 Brassica carinata HOM05D006473 ORTHO05D008108 1.0e-20 104.8 174 44.3
BolC8t48269H Brassica oleracea HOM05D006473 ORTHO05D008108 1.0e-20 104.8 174 44.3
TAR626G1015 Trochodendron aralioides HOM05D006473 ORTHO05D008108 1.3e-20 104.4 155 44.5
Lsat_1_v5_gn_1_29560 Lactuca sativa HOM05D006473 ORTHO05D008108 1.7e-20 104.0 183 36.1
CAN.G529.20 Capsicum annuum HOM05D006473 ORTHO05D008108 3.0e-20 103.2 143 45.5
Nn7g38339 Nelumbo nucifera HOM05D006473 ORTHO05D008108 3.0e-20 103.2 157 42.0
Nitab4.5_0002292g0030 Nicotiana tabacum HOM05D006473 ORTHO05D008108 1.1e-19 101.3 155 44.5
QL04p064939 Quercus lobata HOM05D006473 ORTHO05D008108 1.1e-19 101.3 158 46.2
EL10Ac6g15336 Beta vulgaris HOM05D006473 ORTHO05D008108 1.9e-19 100.5 137 45.3
Carub.0007s2685 Capsella rubella HOM05D006473 ORTHO05D008108 2.5e-19 100.1 170 45.3
AT4G15140 Arabidopsis thaliana HOM05D006473 ORTHO05D008108 3.3e-19 99.8 162 46.3
Peaxi162Scf00393g01011 Petunia axillaris HOM05D006473 ORTHO05D008108 5.6e-19 99.0 153 42.5
BcaB04g18284 Brassica carinata HOM05D006473 ORTHO05D008108 9.5e-19 98.2 169 44.4
BcaC08g44251 Brassica carinata HOM05D006473 ORTHO05D008108 9.5e-19 98.2 174 43.1
C06p16570 Brassica napus HOM05D006473 ORTHO05D008108 9.5e-19 98.2 174 43.1
BolC6t36859H Brassica oleracea HOM05D006473 ORTHO05D008108 9.5e-19 98.2 174 43.1
Aa31LG9G2250 Aethionema arabicum HOM05D006473 ORTHO05D008108 2.1e-18 97.1 168 40.5
Thhalv10027487m.g Eutrema salsugineum HOM05D006473 ORTHO05D008108 2.1e-18 97.1 168 43.5
GSVIVG01015888001 Vitis vinifera HOM05D006473 ORTHO05D008108 3.6e-18 96.3 149 44.3
Aqoxy5G02466 Aquilegia oxysepala HOM05D006473 ORTHO05D008108 6.2e-18 95.5 150 43.3
CSS0026100 Camellia sinensis var. sinensis HOM05D006473 ORTHO05D008108 6.2e-18 95.5 179 41.9
CSS0046570 Camellia sinensis var. sinensis HOM05D006473 ORTHO05D008108 6.2e-18 95.5 179 41.9
PGSC0003DMG400013558 Solanum tuberosum HOM05D006473 ORTHO05D008108 1.1e-17 94.7 137 41.6
AL7G40560 Arabidopsis lyrata HOM05D006473 ORTHO05D008108 1.4e-17 94.4 171 43.3
Solyc07g043070.3 Solanum lycopersicum HOM05D006473 ORTHO05D008108 2.4e-17 93.6 146 43.2
Sopen07g022630 Solanum pennellii HOM05D006473 ORTHO05D008108 2.4e-17 93.6 146 43.2
ECA247G3587 Erigeron canadensis HOM05D006473 ORTHO05D008108 4.0e-17 92.8 172 39.0
QL07p026979 Quercus lobata HOM05D006473 ORTHO05D008108 5.2e-17 92.4 145 44.8
Nitab4.5_0011512g0010 Nicotiana tabacum HOM05D006473 ORTHO05D008108 1.2e-16 91.3 147 43.5
QL09p045725 Quercus lobata HOM05D006473 ORTHO05D008108 1.2e-16 91.3 136 45.6
Actinidia12507 Actinidia chinensis HOM05D006473 ORTHO05D008108 2.6e-16 90.1 179 41.3
Migut.H01260 Erythranthe guttata HOM05D006473 ORTHO05D008108 2.6e-16 90.1 142 40.1
Actinidia32074 Actinidia chinensis HOM05D006473 ORTHO05D008108 3.4e-16 89.7 182 38.5
Rhsim12G0015400 Rhododendron simsii HOM05D006473 ORTHO05D008108 1.7e-15 87.4 139 41.0
Cc00_g04870 Coffea canephora HOM05D006473 ORTHO05D008108 2.9e-15 86.7 149 37.6
Hund23023 Selenicereus undatus HOM05D006473 ORTHO05D008108 2.9e-15 86.7 174 40.8
Sc07g0001930 Simmondsia chinensis HOM05D006473 ORTHO05D008108 6.4e-15 85.5 148 37.8
SGA_v2.0_scaffold49G18372 Striga asiatica HOM05D006473 ORTHO05D008108 1.4e-14 84.3 130 39.2
Nitab4.5_0000170g0320 Nicotiana tabacum HOM05D006473 ORTHO05D008108 1.9e-14 84.0 115 47.0
Hund04387 Selenicereus undatus HOM05D006473 ORTHO05D008108 4.1e-14 82.8 157 38.9
vmacro08765 Vaccinium macrocarpon HOM05D006473 ORTHO05D008108 4.1e-14 82.8 156 39.1
ATR0763G071 Amborella trichopoda HOM05D006473 ORTHO05D008108 1.2e-13 81.3 143 41.3
DCAR_029496 Daucus carota HOM05D006473 ORTHO05D008108 2.3e-12 77.0 171 35.7
HanXRQChr02g0035171 Helianthus annuus HOM05D006473 ORTHO05D008108 3.0e-12 76.6 205 32.7
PSO675G8005 Papaver somniferum HOM05D006473 ORTHO05D008108 8.7e-12 75.1 162 35.2
Cpa.g.sc32.52 Carica papaya HOM05D006473 ORTHO05D008108 1.9e-11 73.9 145 42.1
MBI02_g01129_MAGBIO Magnolia biondii HOM05D006464 ORTHO05D007923 5.6e-11 72.4 112 42.0
CDE05G3197 Ceratophyllum demersum HOM05D006473 ORTHO05D008108 9.6e-11 71.6 136 39.0
Oeu027256.1 Olea europaea HOM05D006473 ORTHO05D008108 9.6e-11 71.6 108 42.6
FAN02G3828 Fragaria x ananassa HOM05D006473 ORTHO05D008108 4.7e-10 69.3 98 46.9
Os04g0504200 Oryza sativa ssp. japonica HOM05D006473 ORTHO05D008108 1.8e-09 67.4 181 33.7
CDE11G0296 Ceratophyllum demersum HOM05D006473 ORTHO05D008108 2.4e-09 67.0 75 50.7
HPP92_016064 Vanilla planifolia HOM05D006473 ORTHO05D008108 1.2e-08 64.7 39 74.4
unitig_62.g23243 Utricularia gibba HOM05D006473 ORTHO05D008108 4.4e-08 62.8 130 33.1
Zm00001eb078060 Zea mays HOM05D006473 ORTHO05D008108 1.3e-07 61.2 173 32.4
QL05p058452 Quercus lobata HOM05D000045 ORTHO05D000611 2.9e-07 60.1 65 50.8
Oeu036758.1 Olea europaea HOM05D006473 ORTHO05D008108 3.8e-07 59.7 99 39.4
AUR62017858 Chenopodium quinoa HOM05D006473 ORTHO05D008108 3.2e-06 56.6 82 42.7


User provided reference genes

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