Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.12G235600 Glycine max HOM05D006691 ORTHO05D007620 1.5e-36 155.6 75 100.0
Glyma.13G201100 Glycine max HOM05D006691 ORTHO05D007620 1.2e-30 136.0 69 95.7
Phvul.011G210100 Phaseolus vulgaris HOM05D006691 ORTHO05D007620 9.4e-23 109.8 64 82.8
Lalb_Chr01g0007961 Lupinus albus HOM05D006691 ORTHO05D007620 4.8e-19 97.4 64 73.4
Medtr8g037800 Medicago truncatula HOM05D006691 ORTHO05D007620 4.1e-18 94.4 69 68.1
TPR.G1848 Trifolium pratense HOM05D006691 ORTHO05D007620 7.0e-18 93.6 69 66.7
Prupe.8G091200 Prunus persica HOM05D006691 ORTHO05D007620 5.0e-16 87.4 65 67.7
MD10G1069300 Malus domestica HOM05D006691 ORTHO05D007620 8.5e-16 86.7 65 69.2
Lj3g0013236 Lotus japonicus HOM05D006691 ORTHO05D007620 1.1e-15 86.3 70 68.6
MD05G1061400 Malus domestica HOM05D006691 ORTHO05D007620 1.9e-15 85.5 64 65.6
CiPaw.06G132900 Carya illinoinensis HOM05D006691 ORTHO05D007620 4.2e-15 84.3 65 63.1
Dinv23490 Davidia involucrata HOM05D006691 ORTHO05D007620 5.5e-15 84.0 58 67.2
arahy.Tifrunner.gnm1.ann1.43WB82 Arachis hypogaea HOM05D006691 ORTHO05D007620 1.2e-14 82.8 78 57.7
Lj1g0004010 Lotus japonicus HOM05D006691 ORTHO05D007620 2.7e-14 81.6 69 62.3
QL11p045203 Quercus lobata HOM05D006691 ORTHO05D007620 3.6e-14 81.3 60 61.7
arahy.Tifrunner.gnm1.ann1.D742FH Arachis hypogaea HOM05D006691 ORTHO05D007620 1.0e-13 79.7 47 76.6
Ciclev10030122m.g Citrus clementina HOM05D006691 ORTHO05D007620 1.4e-13 79.3 63 60.3
FAN15G0999 Fragaria x ananassa HOM05D006691 ORTHO05D007620 4.0e-13 77.8 66 63.6
RcHm_v2.0_Chr6g0265861 Rosa chinensis HOM05D006691 ORTHO05D007620 4.0e-13 77.8 65 61.5
Dinv42040 Davidia involucrata HOM05D006691 ORTHO05D007620 5.2e-13 77.4 65 60.0
FAN27G2049 Fragaria x ananassa HOM05D006691 ORTHO05D007620 5.2e-13 77.4 66 63.6
FvH4_2g09570 Fragaria vesca HOM05D006691 ORTHO05D007620 6.8e-13 77.0 66 63.6
FAN20G2766 Fragaria x ananassa HOM05D006691 ORTHO05D007620 6.8e-13 77.0 65 61.5
FAN24G2625 Fragaria x ananassa HOM05D006691 ORTHO05D007620 6.8e-13 77.0 66 63.6
Nitab4.5_0003234g0120 Nicotiana tabacum HOM05D006691 ORTHO05D007620 8.8e-13 76.6 70 61.4
Psat4g192840 Pisum sativum HOM05D006691 ORTHO05D007620 1.2e-12 76.3 69 59.4
CiPaw.05G069400 Carya illinoinensis HOM05D006691 ORTHO05D007620 2.0e-12 75.5 58 63.8
TWI31G1476 Tripterygium wilfordii HOM05D006691 ORTHO05D007620 2.6e-12 75.1 69 60.9
Potri.009G119900 Populus trichocarpa HOM05D006691 ORTHO05D007620 3.4e-12 74.7 72 56.9
CiPaw.05G069300 Carya illinoinensis HOM05D006691 ORTHO05D007620 4.4e-12 74.3 58 62.1
TAR628G0615 Trochodendron aralioides HOM05D006691 ORTHO05D007620 4.4e-12 74.3 54 64.8
Nitab4.5_0007454g0010 Nicotiana tabacum HOM05D006691 ORTHO05D007620 7.5e-12 73.6 70 58.6
Cc00_g15110 Coffea canephora HOM05D006691 ORTHO05D007620 9.7e-12 73.2 48 68.8
COL.COLO4_25981 Corchorus olitorius HOM05D006691 ORTHO05D007620 1.3e-11 72.8 66 60.6
Hma1.2p1_0066F.1_g036140 Hydrangea macrophylla HOM05D006691 ORTHO05D007620 1.7e-11 72.4 64 56.2
Manes.11G091700 Manihot esculenta HOM05D006691 ORTHO05D007620 1.7e-11 72.4 70 57.1
CiPaw.05G069100 Carya illinoinensis HOM05D006691 ORTHO05D007620 2.8e-11 71.6 58 62.1
Gorai.005G245800 Gossypium raimondii HOM05D006691 ORTHO05D007620 3.7e-11 71.2 67 61.2
Nitab4.5_0001413g0050 Nicotiana tabacum HOM05D006691 ORTHO05D007620 8.3e-11 70.1 41 78.0
Nitab4.5_0013456g0010 Nicotiana tabacum HOM05D006691 ORTHO05D007620 8.3e-11 70.1 41 78.0
Thecc.02G080700 Theobroma cacao HOM05D006691 ORTHO05D007620 8.3e-11 70.1 56 60.7
TWI79G1416 Tripterygium wilfordii HOM05D006691 ORTHO05D007620 8.3e-11 70.1 69 52.2
Gohir.A03G196700 Gossypium hirsutum HOM05D006691 ORTHO05D007620 1.4e-10 69.3 65 60.0
Gohir.D02G217900 Gossypium hirsutum HOM05D006691 ORTHO05D007620 1.4e-10 69.3 67 59.7
Peaxi162Scf00016g00429 Petunia axillaris HOM05D006691 ORTHO05D007620 1.4e-10 69.3 38 81.6
Manes.04G087299 Manihot esculenta HOM05D006691 ORTHO05D007620 1.8e-10 68.9 70 54.3
Gorai.013G035000 Gossypium raimondii HOM05D006691 ORTHO05D007620 2.4e-10 68.6 55 58.2
CAN.G1544.5 Capsicum annuum HOM05D006691 ORTHO05D007620 3.1e-10 68.2 38 81.6
MELO3C023320.2 Cucumis melo HOM05D006691 ORTHO05D007620 4.1e-10 67.8 50 64.0
GSVIVG01023821001 Vitis vinifera HOM05D006691 ORTHO05D007620 4.1e-10 67.8 72 51.4
PSO591G0314 Papaver somniferum HOM05D006691 ORTHO05D007620 5.3e-10 67.4 33 90.9
PSO675G5127 Papaver somniferum HOM05D006691 ORTHO05D007620 5.3e-10 67.4 42 78.6
Gohir.D13G030800 Gossypium hirsutum HOM05D006691 ORTHO05D007620 7.0e-10 67.0 55 56.4
Rhsim05G0071400 Rhododendron simsii HOM05D006691 ORTHO05D007620 7.0e-10 67.0 59 57.6
PGSC0003DMG400030948 Solanum tuberosum HOM05D006691 ORTHO05D007620 7.0e-10 67.0 38 78.9
Actinidia00546 Actinidia chinensis HOM05D006691 ORTHO05D007620 9.1e-10 66.6 69 56.5
CsaV3_2G015000 Cucumis sativus L. HOM05D006691 ORTHO05D007620 9.1e-10 66.6 49 67.3
Sed0023451 Sechium edule HOM05D006691 ORTHO05D007620 9.1e-10 66.6 65 52.3
ClCG11G004170 Citrullus lanatus HOM05D006691 ORTHO05D007620 1.2e-09 66.2 33 87.9
CSS0036321 Camellia sinensis var. sinensis HOM05D006691 ORTHO05D007620 1.6e-09 65.9 33 87.9
Solyc01g109895.1 Solanum lycopersicum HOM05D006691 ORTHO05D007620 1.6e-09 65.9 38 76.3
Sopen01g052090 Solanum pennellii HOM05D006691 ORTHO05D007620 1.6e-09 65.9 38 76.3
Aqoxy5G01556 Aquilegia oxysepala HOM05D006691 ORTHO05D007620 2.0e-09 65.5 68 51.5
Gohir.A13G032600 Gossypium hirsutum HOM05D006691 ORTHO05D007620 2.7e-09 65.1 55 56.4
CANSAT11G0932 Cannabis sativa HOM05D006691 ORTHO05D007620 3.5e-09 64.7 67 50.7
Hund06253 Selenicereus undatus HOM05D006691 ORTHO05D007620 3.5e-09 64.7 38 76.3
Eucgr.I01291 Eucalyptus grandis HOM05D006691 ORTHO05D007620 4.5e-09 64.3 61 52.5
arahy.Tifrunner.gnm1.ann1.GKZX65 Arachis hypogaea HOM05D006691 ORTHO05D007620 5.9e-09 63.9 81 44.4
Duzib248G1522 Durio zibethinus HOM05D006691 ORTHO05D007620 7.7e-09 63.5 65 56.9
Glyma.06G010000 Glycine max HOM05D006691 ORTHO05D007620 1.0e-08 63.2 61 50.8
Lalb_Chr03g0032901 Lupinus albus HOM05D006691 ORTHO05D007620 1.0e-08 63.2 40 67.5
HanXRQChr04g0127791 Helianthus annuus HOM05D006691 ORTHO05D007620 1.3e-08 62.8 33 84.8
Lsat_1_v5_gn_7_91560 Lactuca sativa HOM05D006691 ORTHO05D007620 1.7e-08 62.4 33 84.8
MBI10_g00752_MAGBIO Magnolia biondii HOM05D006691 ORTHO05D007620 1.7e-08 62.4 44 61.4
HanXRQChr16g0505401 Helianthus annuus HOM05D006691 ORTHO05D007620 2.2e-08 62.0 33 81.8
SalBow6G5689 Salvia bowleyana HOM05D006691 ORTHO05D007620 2.2e-08 62.0 69 43.5
Glyma.08G235100 Glycine max HOM05D006691 ORTHO05D007620 2.9e-08 61.6 61 50.8
arahy.Tifrunner.gnm1.ann1.JP7MPK Arachis hypogaea HOM05D006691 ORTHO05D007620 5.0e-08 60.8 81 42.0
Duzib132G0715 Durio zibethinus HOM05D006691 ORTHO05D007620 1.1e-07 59.7 66 51.5
THA.LOC104819621 Tarenaya hassleriana HOM05D006691 ORTHO05D007620 1.1e-07 59.7 38 68.4
MBI16_g36843_MAGBIO Magnolia biondii HOM05D006691 ORTHO05D007620 1.5e-07 59.3 49 55.1
PGR042G3893 Punica granatum HOM05D006691 ORTHO05D007620 2.5e-07 58.5 71 49.3
CSS0004191 Camellia sinensis var. sinensis HOM05D006691 ORTHO05D007620 3.2e-07 58.2 33 78.8
Migut.B00211 Erythranthe guttata HOM05D006691 ORTHO05D007620 9.4e-07 56.6 69 43.5
AL3G52540 Arabidopsis lyrata HOM05D006691 ORTHO05D007620 1.2e-06 56.2 32 78.1
AT2G16385 Arabidopsis thaliana HOM05D006691 ORTHO05D007620 1.2e-06 56.2 32 78.1
DCAR_001560 Daucus carota HOM05D006691 ORTHO05D007620 2.1e-06 55.5 58 48.3
Eucgr.G01694 Eucalyptus grandis HOM05D006691 ORTHO05D007620 2.1e-06 55.5 73 46.6
ATR0585G050 Amborella trichopoda HOM05D006691 ORTHO05D007620 2.7e-06 55.1 72 38.9
CSS0048821 Camellia sinensis var. sinensis HOM05D006691 ORTHO05D007620 2.7e-06 55.1 76 50.0
Peaxi162Scf00684g00234 Petunia axillaris HOM05D006691 ORTHO05D007620 2.7e-06 55.1 39 69.2
Ah.01g019150 Amaranthus hybridus HOM05D001345 ORTHO05D001190 6.1e-06 53.9 56 55.4
Carub.0007s0568 Capsella rubella HOM05D006691 ORTHO05D007620 6.1e-06 53.9 32 68.8
BcaNung00683 Brassica carinata HOM05D006691 ORTHO05D007620 8.0e-06 53.5 42 59.5
A01p03880 Brassica napus HOM05D006691 ORTHO05D007620 8.0e-06 53.5 42 59.5
C01p04190 Brassica napus HOM05D006691 ORTHO05D007620 8.0e-06 53.5 42 59.5
BraA01t00375Z Brassica rapa HOM05D006691 ORTHO05D007620 8.0e-06 53.5 42 59.5
Carub.0003s3015 Capsella rubella HOM05D006691 ORTHO05D007620 8.0e-06 53.5 32 75.0


User provided reference genes

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