Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.12G162201 Glycine max HOM05D005607 ORTHO05D008142 1.0e-91 340.1 175 100.0
Glyma.06G236100 Glycine max HOM05D005607 ORTHO05D008142 7.4e-79 297.4 164 92.1
Lalb_Chr19g0134061 Lupinus albus HOM05D005607 ORTHO05D008142 4.4e-71 271.6 164 84.1
Ca_23036_v3 Cicer arietinum L. HOM05D005607 ORTHO05D008142 4.8e-70 268.1 175 79.4
Lj3g0025006 Lotus japonicus HOM05D005607 ORTHO05D008142 6.3e-70 267.7 164 81.1
TPR.G28174 Trifolium pratense HOM05D005607 ORTHO05D008142 1.5e-68 263.1 164 82.3
Medtr8g058790 Medicago truncatula HOM05D005607 ORTHO05D008142 1.3e-67 260.0 165 81.2
Medtr8g061280 Medicago truncatula HOM05D005607 ORTHO05D008142 1.3e-67 260.0 165 81.2
arahy.Tifrunner.gnm1.ann1.3D346W Arachis hypogaea HOM05D005607 ORTHO05D008142 1.7e-67 259.6 164 81.7
arahy.Tifrunner.gnm1.ann1.K8QLTQ Arachis hypogaea HOM05D005607 ORTHO05D008142 3.8e-67 258.5 164 82.3
MD03G1232700 Malus domestica HOM05D005607 ORTHO05D008142 2.0e-63 246.1 164 73.8
RcHm_v2.0_Chr5g0032701 Rosa chinensis HOM05D005607 ORTHO05D008142 3.3e-63 245.4 172 71.5
Dinv20204 Davidia involucrata HOM05D005607 ORTHO05D008142 1.4e-61 240.0 172 69.2
Prupe.4G175900 Prunus persica HOM05D005607 ORTHO05D008142 2.4e-61 239.2 172 72.1
FvH4_3g19420 Fragaria vesca HOM05D005607 ORTHO05D008142 4.1e-61 238.4 172 69.2
CSS0008326 Camellia sinensis var. sinensis HOM05D005607 ORTHO05D008142 5.9e-60 234.6 164 70.7
Ciclev10007885m.g Citrus clementina HOM05D005607 ORTHO05D008142 1.3e-59 233.4 172 70.9
Eucgr.F01169 Eucalyptus grandis HOM05D005607 ORTHO05D008142 1.7e-59 233.0 172 67.4
FAN16G0865 Fragaria x ananassa HOM05D005607 ORTHO05D008142 1.7e-59 233.0 172 67.4
MELO3C025610.2 Cucumis melo HOM05D005607 ORTHO05D008142 2.9e-59 232.3 172 67.4
VMungo1127G0827 Vigna mungo HOM05D005607 ORTHO05D008142 2.9e-59 232.3 164 73.2
GSVIVG01014288001 Vitis vinifera HOM05D005607 ORTHO05D008142 6.5e-59 231.1 172 68.0
ClCG11G017810 Citrullus lanatus HOM05D005607 ORTHO05D008142 8.5e-59 230.7 164 69.5
Sed0013999 Sechium edule HOM05D005607 ORTHO05D008142 1.1e-58 230.3 172 66.9
CsaV3_4G033450 Cucumis sativus L. HOM05D005607 ORTHO05D008142 1.5e-58 229.9 172 67.4
Phvul.011G160300 Phaseolus vulgaris HOM05D005607 ORTHO05D008142 1.5e-58 229.9 164 72.0
Thecc.07G096400 Theobroma cacao HOM05D005607 ORTHO05D008142 1.9e-58 229.6 172 66.9
TWI38G0301 Tripterygium wilfordii HOM05D005607 ORTHO05D008142 2.5e-58 229.2 164 70.7
Potri.001G396500 Populus trichocarpa HOM05D005607 ORTHO05D008142 4.2e-58 228.4 173 69.4
Sabra16G0259600 Salix brachista HOM05D005607 ORTHO05D008142 7.2e-58 227.6 173 69.9
QL08p023973 Quercus lobata HOM05D005607 ORTHO05D008142 9.4e-58 227.3 171 66.7
Rhsim06G0202700 Rhododendron simsii HOM05D005607 ORTHO05D008142 9.4e-58 227.3 172 67.4
Duzib170G0139 Durio zibethinus HOM05D005607 ORTHO05D008142 3.6e-57 225.3 164 67.7
Gohir.A04G035700 Gossypium hirsutum HOM05D005607 ORTHO05D008142 4.7e-57 224.9 172 66.3
COL.COLO4_36717 Corchorus olitorius HOM05D005607 ORTHO05D008142 8.0e-57 224.2 164 65.9
Gohir.D05G347700 Gossypium hirsutum HOM05D005607 ORTHO05D008142 8.0e-57 224.2 172 65.7
Actinidia31524 Actinidia chinensis HOM05D005607 ORTHO05D008142 3.0e-56 222.2 172 65.7
Gorai.009G375500 Gossypium raimondii HOM05D005607 ORTHO05D008142 5.2e-56 221.5 172 65.7
Cfa020607 Carpinus fangiana HOM05D005607 ORTHO05D008142 6.8e-56 221.1 164 67.1
vmacro11890 Vaccinium macrocarpon HOM05D005607 ORTHO05D008142 8.8e-56 220.7 163 67.5
vmacro23190 Vaccinium macrocarpon HOM05D005607 ORTHO05D008142 8.8e-56 220.7 163 67.5
DCAR_017123 Daucus carota HOM05D005607 ORTHO05D008142 1.2e-55 220.3 164 65.2
Hund02235 Selenicereus undatus HOM05D005607 ORTHO05D008142 1.2e-55 220.3 171 63.7
CiPaw.11G167700 Carya illinoinensis HOM05D005607 ORTHO05D008142 2.6e-55 219.2 172 65.1
PGR083G1887 Punica granatum HOM05D005607 ORTHO05D008142 3.4e-55 218.8 173 65.9
Sc16g0007180 Simmondsia chinensis HOM05D005607 ORTHO05D008142 3.4e-55 218.8 171 63.7
Cpa.g.sc131.86 Carica papaya HOM05D005607 ORTHO05D008142 5.7e-55 218.0 172 64.5
Cc05_g11730 Coffea canephora HOM05D005607 ORTHO05D008142 2.2e-54 216.1 171 62.6
Manes.03G105800 Manihot esculenta HOM05D005607 ORTHO05D008142 1.8e-53 213.0 172 64.5
Lj1A839T35 Lonicera japonica HOM05D005607 ORTHO05D008142 4.1e-53 211.8 164 64.6
MSTRG.12893 Avicennia marina HOM05D005607 ORTHO05D008142 5.4e-53 211.5 172 61.0
Nitab4.5_0008275g0010 Nicotiana tabacum HOM05D005607 ORTHO05D008142 3.5e-52 208.8 172 61.0
Lj1A839T37 Lonicera japonica HOM05D005607 ORTHO05D008142 4.5e-52 208.4 164 63.4
Nitab4.5_0002330g0110 Nicotiana tabacum HOM05D005607 ORTHO05D008142 7.7e-52 207.6 172 61.0
Nn1g04204 Nelumbo nucifera HOM05D005607 ORTHO05D008142 1.7e-51 206.5 164 64.0
SGA_v2.0_scaffold130G34350 Striga asiatica HOM05D005607 ORTHO05D008142 2.2e-51 206.1 172 60.5
CAN.G162.36 Capsicum annuum HOM05D005607 ORTHO05D008142 2.9e-51 205.7 172 59.9
Migut.H01958 Erythranthe guttata HOM05D005607 ORTHO05D008142 2.9e-51 205.7 172 59.9
Sopen07g031060 Solanum pennellii HOM05D005607 ORTHO05D008142 3.8e-51 205.3 172 60.5
Oeu005401.4 Olea europaea HOM05D005607 ORTHO05D008142 1.1e-50 203.8 212 52.4
Peaxi162Scf00069g01838 Petunia axillaris HOM05D005607 ORTHO05D008142 1.1e-50 203.8 163 62.0
PSO210G5410 Papaver somniferum HOM05D005607 ORTHO05D008142 1.5e-50 203.4 172 62.8
Atru.chr2.2407 Acer truncatum HOM05D005607 ORTHO05D008142 3.2e-50 202.2 172 63.4
CANSAT35G0745 Cannabis sativa HOM05D005607 ORTHO05D008142 4.2e-50 201.8 164 63.4
PSO832G0774 Papaver somniferum HOM05D005607 ORTHO05D008142 5.5e-50 201.4 172 62.2
Eucgr.F00890 Eucalyptus grandis HOM05D005607 ORTHO05D008142 9.4e-50 200.7 172 61.6
Ah.06g184600 Amaranthus hybridus HOM05D005607 ORTHO05D008142 8.0e-49 197.6 164 64.6
EL10Ac4g08241 Beta vulgaris HOM05D005607 ORTHO05D008142 8.0e-49 197.6 167 61.7
ECA236G2999 Erigeron canadensis HOM05D005607 ORTHO05D008142 8.0e-49 197.6 165 60.6
HanXRQChr15g0495421 Helianthus annuus HOM05D005607 ORTHO05D008142 2.3e-48 196.1 165 60.6
Lsat_1_v5_gn_7_104480 Lactuca sativa HOM05D005607 ORTHO05D008142 3.0e-48 195.7 165 62.4
THA.LOC104815562 Tarenaya hassleriana HOM05D005607 ORTHO05D008142 6.8e-48 194.5 164 62.2
AL3G27570 Arabidopsis lyrata HOM05D005607 ORTHO05D008142 4.4e-47 191.8 172 59.3
Duzib213G0871 Durio zibethinus HOM05D005607 ORTHO05D008142 5.7e-47 191.4 166 61.4
SalBow7G3213 Salvia bowleyana HOM05D005607 ORTHO05D008142 7.5e-47 191.0 172 55.8
SalBow7G3521 Salvia bowleyana HOM05D005607 ORTHO05D008142 7.5e-47 191.0 172 55.8
AT3G15180 Arabidopsis thaliana HOM05D005607 ORTHO05D008142 1.3e-46 190.3 172 58.7
C05p52050 Brassica napus HOM05D005607 ORTHO05D008142 2.8e-46 189.1 164 61.6
BraA05t22250Z Brassica rapa HOM05D005607 ORTHO05D008142 1.4e-45 186.8 164 61.0
Aa31LG8G2380 Aethionema arabicum HOM05D005607 ORTHO05D008142 1.8e-45 186.4 172 58.7
A05p34290 Brassica napus HOM05D005607 ORTHO05D008142 1.8e-45 186.4 164 61.0
BolC5t33890H Brassica oleracea HOM05D005607 ORTHO05D008142 1.6e-44 183.3 161 60.2
Carub.0003s1483 Capsella rubella HOM05D005607 ORTHO05D008142 1.6e-44 183.3 172 56.4
AUR62019473 Chenopodium quinoa HOM05D005607 ORTHO05D008142 1.6e-44 183.3 201 51.7
Sp3g13390 Schrenkiella parvula HOM05D005607 ORTHO05D008142 2.0e-44 183.0 172 58.1
Thhalv10020515m.g Eutrema salsugineum HOM05D005607 ORTHO05D008142 2.7e-44 182.6 172 58.7
ATR0737G117 Amborella trichopoda HOM05D005607 ORTHO05D008142 4.5e-44 181.8 166 56.0
Os05g0557200 Oryza sativa ssp. japonica HOM05D005607 ORTHO05D008142 1.7e-43 179.9 165 57.6
Haze_09409 Corylus avellana HOM05D005607 ORTHO05D008142 2.3e-43 179.5 163 57.7
CSS0003695 Camellia sinensis var. sinensis HOM05D005607 ORTHO05D008142 8.6e-43 177.6 176 56.8
AUR62036159 Chenopodium quinoa HOM05D005607 ORTHO05D008142 3.3e-42 175.6 171 56.1
Zm00001eb295460 Zea mays HOM05D005607 ORTHO05D008142 3.3e-42 175.6 173 54.3
Eucgr.F01141 Eucalyptus grandis HOM05D005607 ORTHO05D008142 6.1e-41 171.4 172 55.8
MD11G1253400 Malus domestica HOM05D005607 ORTHO05D008142 1.5e-39 166.8 103 81.6
CDE10G0361 Ceratophyllum demersum HOM05D005607 ORTHO05D008142 4.4e-39 165.2 164 54.9
unitig_749.g13531 Utricularia gibba HOM05D005607 ORTHO05D008142 8.3e-38 161.0 136 57.4
BcaB06g29542 Brassica carinata HOM05D005607 ORTHO05D008142 1.1e-37 160.6 164 56.1
Aqoxy4G00691 Aquilegia oxysepala HOM05D005607 ORTHO05D008142 3.7e-30 135.6 103 66.0
SEGI_34734 Sequoiadendron giganteum HOM05D005607 ORTHO05D008142 4.9e-30 135.2 126 57.1
AagrBONN_evm.TU.Sc2ySwM_344.1287 Anthoceros agrestis HOM05D005607 ORTHO05D008142 8.1e-25 117.9 164 39.6
SMO139G0024 Selaginella moellendorffii HOM05D005607 ORTHO05D008142 6.4e-22 108.2 164 38.4
Pp3c1_12630 Physcomitrium patens HOM05D005607 ORTHO05D008142 9.2e-21 104.4 166 35.5
Psat7g207160 Pisum sativum HOM05D005607 ORTHO05D008142 3.9e-19 99.0 69 75.4
EL10Ac6g14983 Beta vulgaris HOM05D005607 ORTHO05D008142 6.6e-19 98.2 101 52.5
CBR_g2884 Chara braunii HOM05D005607 ORTHO05D008142 4.6e-12 75.5 104 41.3
MBI06_g04182_MAGBIO Magnolia biondii HOM05D005607 ORTHO05D008142 3.9e-11 72.4 134 38.8
SMO145G0057 Selaginella moellendorffii HOM05D005607 ORTHO05D008142 1.5e-10 70.5 102 37.3


User provided reference genes

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