Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.12G148500 Glycine max HOM05D004279 ORTHO05D004979 3.3e-164 581.6 295 100.0
Glyma.06G249400 Glycine max HOM05D004279 ORTHO05D004979 2.2e-144 515.8 296 89.5
Phvul.011G148200 Phaseolus vulgaris HOM05D004279 ORTHO05D004979 1.7e-136 489.6 295 85.4
VMungo1127G1925 Vigna mungo HOM05D004279 ORTHO05D004979 3.6e-134 481.9 295 83.4
Ca_01814_v3 Cicer arietinum L. HOM05D004279 ORTHO05D004979 3.3e-111 405.6 299 70.9
Ca_30536_v3 Cicer arietinum L. HOM05D004279 ORTHO05D004979 3.3e-111 405.6 299 70.9
TPR.G38955 Trifolium pratense HOM05D004279 ORTHO05D004979 4.3e-111 405.2 299 70.9
Psat4g016400 Pisum sativum HOM05D004279 ORTHO05D004979 6.1e-110 401.4 299 70.2
Lj3g0025503 Lotus japonicus HOM05D004279 ORTHO05D004979 8.0e-110 401.0 298 70.1
Medtr2g080130 Medicago truncatula HOM05D004279 ORTHO05D004979 2.3e-109 399.4 299 70.9
Glyma.12G220600 Glycine max HOM05D004279 ORTHO05D004979 2.6e-108 396.0 299 69.6
Phvul.005G085300 Phaseolus vulgaris HOM05D004279 ORTHO05D004979 9.8e-108 394.0 299 69.2
VMungo1080G0833 Vigna mungo HOM05D004279 ORTHO05D004979 2.2e-107 392.9 299 68.9
CANSAT11G2237 Cannabis sativa HOM05D004279 ORTHO05D004979 3.5e-105 385.6 296 67.9
QL08p019074 Quercus lobata HOM05D004279 ORTHO05D004979 4.6e-105 385.2 297 69.4
Gohir.D01G054400 Gossypium hirsutum HOM05D004279 ORTHO05D004979 3.0e-104 382.5 295 70.2
Gorai.002G074300 Gossypium raimondii HOM05D004279 ORTHO05D004979 3.0e-104 382.5 295 70.2
Lalb_Chr01g0016991 Lupinus albus HOM05D004279 ORTHO05D004979 5.0e-104 381.7 300 68.0
CiPaw.11G174600 Carya illinoinensis HOM05D004279 ORTHO05D004979 8.6e-104 380.9 297 68.7
Haze_09505 Corylus avellana HOM05D004279 ORTHO05D004979 2.5e-103 379.4 297 69.0
Gohir.A01G067200 Gossypium hirsutum HOM05D004279 ORTHO05D004979 4.3e-103 378.6 295 69.8
Cfa020528 Carpinus fangiana HOM05D004279 ORTHO05D004979 7.3e-103 377.9 297 69.0
COL.COLO4_09461 Corchorus olitorius HOM05D004279 ORTHO05D004979 9.5e-103 377.5 295 68.5
Duzib213G0014 Durio zibethinus HOM05D004279 ORTHO05D004979 3.6e-102 375.6 295 68.8
Gorai.009G432300 Gossypium raimondii HOM05D004279 ORTHO05D004979 3.6e-102 375.6 295 68.8
CiPaw.12G122100 Carya illinoinensis HOM05D004279 ORTHO05D004979 4.7e-102 375.2 295 68.8
Gohir.A04G027700 Gossypium hirsutum HOM05D004279 ORTHO05D004979 4.7e-102 375.2 295 68.1
Gohir.D05G360400 Gossypium hirsutum HOM05D004279 ORTHO05D004979 4.7e-102 375.2 295 68.5
Prupe.4G187700 Prunus persica HOM05D004279 ORTHO05D004979 4.7e-102 375.2 299 66.6
Thecc.07G074500 Theobroma cacao HOM05D004279 ORTHO05D004979 1.1e-101 374.0 295 67.8
Lj1A851T62 Lonicera japonica HOM05D004279 ORTHO05D004979 2.3e-101 372.9 294 68.0
Manes.03G114800 Manihot esculenta HOM05D004279 ORTHO05D004979 4.0e-101 372.1 299 65.2
Cpa.g.sc80.101 Carica papaya HOM05D004279 ORTHO05D004979 5.2e-101 371.7 295 67.5
Aqoxy4G01310 Aquilegia oxysepala HOM05D004279 ORTHO05D004979 6.8e-101 371.3 294 65.6
Sabra16G0266200 Salix brachista HOM05D004279 ORTHO05D004979 8.9e-101 370.9 296 67.6
CSS0001500 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 1.2e-100 370.5 295 68.5
Potri.001G405200 Populus trichocarpa HOM05D004279 ORTHO05D004979 1.2e-100 370.5 296 67.6
TWI38G1973 Tripterygium wilfordii HOM05D004279 ORTHO05D004979 1.2e-100 370.5 295 66.1
Lalb_Chr25g0286631 Lupinus albus HOM05D004279 ORTHO05D004979 1.5e-100 370.2 301 67.1
Duzib268G0928 Durio zibethinus HOM05D004279 ORTHO05D004979 9.8e-100 367.5 295 67.1
Actinidia35269 Actinidia chinensis HOM05D004279 ORTHO05D004979 1.3e-99 367.1 295 66.4
Hma1.2p1_1143F.1_g261130 Hydrangea macrophylla HOM05D004279 ORTHO05D004979 2.2e-99 366.3 294 67.7
MD11G1239200 Malus domestica HOM05D004279 ORTHO05D004979 2.9e-99 365.9 299 63.9
PGR031G2155 Punica granatum HOM05D004279 ORTHO05D004979 2.9e-99 365.9 296 66.6
TWI39G0076 Tripterygium wilfordii HOM05D004279 ORTHO05D004979 4.9e-99 365.2 299 65.9
Dinv22371 Davidia involucrata HOM05D004279 ORTHO05D004979 6.4e-99 364.8 295 67.1
MD03G1221800 Malus domestica HOM05D004279 ORTHO05D004979 6.4e-99 364.8 299 65.9
DCAR_009977 Daucus carota HOM05D004279 ORTHO05D004979 8.3e-99 364.4 295 66.1
HanXRQChr05g0156561 Helianthus annuus HOM05D004279 ORTHO05D004979 1.1e-98 364.0 295 67.1
Hma1.2p1_1274F.1_g271930 Hydrangea macrophylla HOM05D004279 ORTHO05D004979 1.1e-98 364.0 293 66.2
Ciclev10009067m.g Citrus clementina HOM05D004279 ORTHO05D004979 1.4e-98 363.6 291 65.3
RcHm_v2.0_Chr5g0034991 Rosa chinensis HOM05D004279 ORTHO05D004979 1.4e-98 363.6 294 66.0
FAN16G2997 Fragaria x ananassa HOM05D004279 ORTHO05D004979 2.4e-98 362.8 294 67.0
FvH4_3g20760 Fragaria vesca HOM05D004279 ORTHO05D004979 3.2e-98 362.5 294 67.0
FAN11G1457 Fragaria x ananassa HOM05D004279 ORTHO05D004979 3.2e-98 362.5 294 67.0
ECA236G3281 Erigeron canadensis HOM05D004279 ORTHO05D004979 4.1e-98 362.1 295 66.4
MELO3C018223.2 Cucumis melo HOM05D004279 ORTHO05D004979 7.0e-98 361.3 297 67.3
CsaV3_3G044480 Cucumis sativus L. HOM05D004279 ORTHO05D004979 7.0e-98 361.3 297 67.3
FAN21G3274 Fragaria x ananassa HOM05D004279 ORTHO05D004979 9.2e-98 360.9 294 66.7
TAR626G0357 Trochodendron aralioides HOM05D004279 ORTHO05D004979 1.2e-97 360.5 296 64.2
Potri.011G128300 Populus trichocarpa HOM05D004279 ORTHO05D004979 1.6e-97 360.1 295 66.8
Nn1g06689 Nelumbo nucifera HOM05D004279 ORTHO05D004979 3.5e-97 359.0 288 66.3
FAN25G2565 Fragaria x ananassa HOM05D004279 ORTHO05D004979 4.6e-97 358.6 294 66.7
Rhsim04G0018800 Rhododendron simsii HOM05D004279 ORTHO05D004979 6.0e-97 358.2 295 66.8
ClCG11G018340 Citrullus lanatus HOM05D004279 ORTHO05D004979 1.3e-96 357.1 297 66.3
Eucgr.F03342 Eucalyptus grandis HOM05D004279 ORTHO05D004979 1.7e-96 356.7 297 64.3
Lsat_1_v5_gn_5_7280 Lactuca sativa HOM05D004279 ORTHO05D004979 3.9e-96 355.5 295 65.4
Cc05_g12550 Coffea canephora HOM05D004279 ORTHO05D004979 5.1e-96 355.1 299 65.2
Nitab4.5_0000815g0050 Nicotiana tabacum HOM05D004279 ORTHO05D004979 5.1e-96 355.1 294 66.0
Manes.15G084500 Manihot esculenta HOM05D004279 ORTHO05D004979 8.6e-96 354.4 299 63.5
THA.LOC104810491 Tarenaya hassleriana HOM05D004279 ORTHO05D004979 1.9e-95 353.2 295 66.1
CSS0025917 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 2.5e-95 352.8 296 66.2
Dinv08329 Davidia involucrata HOM05D004279 ORTHO05D004979 3.3e-95 352.4 284 67.6
Eucgr.F01088 Eucalyptus grandis HOM05D004279 ORTHO05D004979 5.6e-95 351.7 296 65.9
Oeu055672.1 Olea europaea HOM05D004279 ORTHO05D004979 2.1e-94 349.7 300 64.0
Nn1g03957 Nelumbo nucifera HOM05D004279 ORTHO05D004979 2.8e-94 349.4 294 62.6
HanXRQChr13g0386401 Helianthus annuus HOM05D004279 ORTHO05D004979 4.7e-94 348.6 295 64.7
Sed0000911 Sechium edule HOM05D004279 ORTHO05D004979 6.2e-94 348.2 297 65.3
Migut.H01911 Erythranthe guttata HOM05D004279 ORTHO05D004979 1.1e-93 347.4 299 63.2
PGSC0003DMG400019253 Solanum tuberosum HOM05D004279 ORTHO05D004979 1.4e-93 347.1 294 63.9
DCAR_022481 Daucus carota HOM05D004279 ORTHO05D004979 1.8e-93 346.7 295 63.7
Peaxi162Scf01111g00012 Petunia axillaris HOM05D004279 ORTHO05D004979 2.3e-93 346.3 294 64.3
Solyc07g063460.3 Solanum lycopersicum HOM05D004279 ORTHO05D004979 2.3e-93 346.3 294 63.9
Sopen07g031640 Solanum pennellii HOM05D004279 ORTHO05D004979 2.3e-93 346.3 294 63.9
Actinidia18754 Actinidia chinensis HOM05D002936 ORTHO05D004979 3.1e-93 345.9 288 65.3
C02p17040 Brassica napus HOM05D004279 ORTHO05D004979 4.0e-93 345.5 295 63.7
Sp6g16410 Schrenkiella parvula HOM05D004279 ORTHO05D004979 4.0e-93 345.5 295 64.1
AT3G15530 Arabidopsis thaliana HOM05D004279 ORTHO05D004979 1.5e-92 343.6 295 64.1
Carub.0003s1526 Capsella rubella HOM05D004279 ORTHO05D004979 1.5e-92 343.6 295 64.1
BcaC09g48518 Brassica carinata HOM05D004279 ORTHO05D004979 2.0e-92 343.2 295 63.7
CARHR090590 Cardamine hirsuta HOM05D004279 ORTHO05D004979 2.6e-92 342.8 295 63.7
AL8G29740 Arabidopsis lyrata HOM05D004279 ORTHO05D004979 3.4e-92 342.4 296 62.8
AT5G54400 Arabidopsis thaliana HOM05D004279 ORTHO05D004979 3.4e-92 342.4 296 62.2
MSTRG.14375 Avicennia marina HOM05D004279 ORTHO05D004979 3.4e-92 342.4 301 63.1
AL3G28110 Arabidopsis lyrata HOM05D004279 ORTHO05D004979 4.4e-92 342.0 295 63.7
BolC2t07801H Brassica oleracea HOM05D004279 ORTHO05D004979 4.4e-92 342.0 295 63.1
Thhalv10021257m.g Eutrema salsugineum HOM05D004279 ORTHO05D004979 4.4e-92 342.0 295 63.7
Nitab4.5_0009177g0010 Nicotiana tabacum HOM05D004279 ORTHO05D004979 4.4e-92 342.0 294 65.0
A02p10310 Brassica napus HOM05D004279 ORTHO05D004979 5.8e-92 341.7 295 63.1
BolC1t04855H Brassica oleracea HOM05D004279 ORTHO05D004979 5.8e-92 341.7 295 63.4
BraA02t06098Z Brassica rapa HOM05D004279 ORTHO05D004979 7.5e-92 341.3 295 63.1
A05p33880 Brassica napus HOM05D004279 ORTHO05D004979 1.3e-91 340.5 295 63.1
SGA_v2.0_scaffold9G04950 Striga asiatica HOM05D004279 ORTHO05D004979 1.7e-91 340.1 299 62.9
MSTRG.12925 Avicennia marina HOM05D004279 ORTHO05D004979 2.2e-91 339.7 301 62.5
Sc16g0006820 Simmondsia chinensis HOM05D004279 ORTHO05D004979 2.2e-91 339.7 298 62.8
Aa31LG3G10340 Aethionema arabicum HOM05D004279 ORTHO05D004979 2.9e-91 339.3 297 63.3
Sp3g13790 Schrenkiella parvula HOM05D004279 ORTHO05D004979 2.9e-91 339.3 295 63.1
BcaB05g22132 Brassica carinata HOM05D004279 ORTHO05D004979 3.7e-91 339.0 295 63.1
BcaB06g29588 Brassica carinata HOM05D004279 ORTHO05D004979 3.7e-91 339.0 296 62.8
BcaC05g28964 Brassica carinata HOM05D004279 ORTHO05D004979 4.9e-91 338.6 295 62.7
C05p51590 Brassica napus HOM05D004279 ORTHO05D004979 4.9e-91 338.6 295 62.7
BolC5t33846H Brassica oleracea HOM05D004279 ORTHO05D004979 4.9e-91 338.6 295 62.7
Oeu008023.1 Olea europaea HOM05D004279 ORTHO05D004979 4.9e-91 338.6 300 62.7
BcaB04g20920 Brassica carinata HOM05D004279 ORTHO05D004979 8.3e-91 337.8 295 63.1
PSO210G3340 Papaver somniferum HOM05D004279 ORTHO05D004979 8.3e-91 337.8 296 62.5
BraA05t22210Z Brassica rapa HOM05D004279 ORTHO05D004979 1.1e-90 337.4 295 62.7
Carub.0008s1473 Capsella rubella HOM05D004279 ORTHO05D004979 1.4e-90 337.0 297 63.0
CARHR267680 Cardamine hirsuta HOM05D004279 ORTHO05D004979 1.9e-90 336.7 295 62.7
PSO832G3402 Papaver somniferum HOM05D004279 ORTHO05D004979 2.4e-90 336.3 296 62.2
Sed0021920 Sechium edule HOM05D004279 ORTHO05D004979 3.2e-90 335.9 298 63.4
Aa31LG8G2770 Aethionema arabicum HOM05D004279 ORTHO05D004979 1.2e-89 334.0 295 62.7
SalBow7G1458 Salvia bowleyana HOM05D004279 ORTHO05D004979 2.7e-89 332.8 294 63.6
SGA_v2.0_scaffold73G24305 Striga asiatica HOM05D004279 ORTHO05D004979 1.0e-88 330.9 294 60.5
BraA01t03905Z Brassica rapa HOM05D004279 ORTHO05D004979 1.3e-88 330.5 289 63.3
TAR624G0257 Trochodendron aralioides HOM05D004279 ORTHO05D004979 1.3e-88 330.5 279 63.1
A01p38550 Brassica napus HOM05D004279 ORTHO05D004979 3.0e-88 329.3 289 63.3
CSS0045555 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 6.6e-88 328.2 296 63.5
BcaC03g14314 Brassica carinata HOM05D004279 ORTHO05D004979 8.6e-88 327.8 283 63.3
C01p48920 Brassica napus HOM05D004279 ORTHO05D004979 1.1e-87 327.4 289 62.6
THA.LOC104799915 Tarenaya hassleriana HOM05D004279 ORTHO05D004979 1.1e-87 327.4 298 62.4
THA.LOC104818054 Tarenaya hassleriana HOM05D004279 ORTHO05D004979 7.3e-87 324.7 295 62.0
unitig_0.g2258 Utricularia gibba HOM05D004279 ORTHO05D004979 7.3e-87 324.7 300 60.3
Glyma.13G280900 Glycine max HOM05D004279 ORTHO05D004979 1.6e-86 323.6 297 59.6
CSS0022309 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 2.4e-85 319.7 295 62.4
Ah.06g183670 Amaranthus hybridus HOM05D004279 ORTHO05D004979 5.2e-85 318.5 302 58.6
Lsat_1_v5_gn_7_105700 Lactuca sativa HOM05D004279 ORTHO05D004979 1.5e-84 317.0 297 61.3
MBI02_g29384_MAGBIO Magnolia biondii HOM05D004279 ORTHO05D004979 1.5e-84 317.0 291 59.1
SHI28037 Sapria himalayana HOM05D004279 ORTHO05D004979 1.9e-82 310.1 290 57.9
AUR62015623 Chenopodium quinoa HOM05D004279 ORTHO05D004979 3.2e-82 309.3 301 56.8
AUR62029338 Chenopodium quinoa HOM05D004279 ORTHO05D004979 4.2e-82 308.9 301 56.8
EL10Ac4g08091 Beta vulgaris HOM05D004279 ORTHO05D004979 7.1e-82 308.1 300 56.3
HPP92_016704 Vanilla planifolia HOM05D004279 ORTHO05D004979 4.0e-77 292.4 292 55.8
ECA246G0789 Erigeron canadensis HOM05D004279 ORTHO05D004979 1.0e-72 277.7 249 61.8
SHI18877 Sapria himalayana HOM05D004279 ORTHO05D004979 1.1e-69 267.7 267 56.9
SHI27994 Sapria himalayana HOM05D004279 ORTHO05D004979 4.3e-63 245.7 283 49.8
SHI27902 Sapria himalayana HOM05D004279 ORTHO05D004979 1.7e-59 233.8 282 50.4
GSVIVG01014410001 Vitis vinifera HOM05D004279 ORTHO05D004979 1.6e-57 227.3 199 63.3
ATR0693G409 Amborella trichopoda HOM05D004279 ORTHO05D004979 3.5e-57 226.1 279 50.2
Thhalv10014468m.g Eutrema salsugineum HOM05D004279 ORTHO05D004979 9.6e-55 218.0 219 57.5
SHI27891 Sapria himalayana HOM05D004279 ORTHO05D004979 1.4e-53 214.2 272 47.4
Mapoly0019s0089 Marchantia polymorpha HOM05D004279 ORTHO05D004979 1.9e-50 203.8 284 43.7
Atru.chr2.2812 Acer truncatum HOM05D004279 ORTHO05D004979 4.1e-45 186.0 144 67.4
HanXRQChr08g0235651 Helianthus annuus HOM05D004279 ORTHO05D004979 3.8e-43 179.5 170 60.0
HanXRQChr08g0235661 Helianthus annuus HOM05D004279 ORTHO05D004979 1.4e-42 177.6 126 72.2
SHI28023 Sapria himalayana HOM05D004279 ORTHO05D004979 1.0e-40 171.4 269 42.8
VMungo1127G2040 Vigna mungo HOM05D004279 ORTHO05D004979 1.1e-39 167.9 153 59.5
CAN.G162.92 Capsicum annuum HOM05D004279 ORTHO05D004979 5.7e-39 165.6 147 59.9
Haze_01531 Corylus avellana HOM05D004279 ORTHO05D004979 7.7e-28 128.6 114 61.4
Haze_12044 Corylus avellana HOM05D004279 ORTHO05D004979 6.5e-27 125.6 128 56.2
Atru.chr2.2813 Acer truncatum HOM05D004279 ORTHO05D004979 6.1e-25 119.0 104 57.7
Haze_10444 Corylus avellana HOM05D004279 ORTHO05D004979 2.6e-23 113.6 99 64.6
QL06p019554 Quercus lobata HOM05D004279 ORTHO05D004979 1.4e-21 107.8 86 67.4
CBR_g24389 Chara braunii HOM05D004279 ORTHO05D004979 2.1e-17 94.0 335 26.9
Haze_06332 Corylus avellana HOM05D004279 ORTHO05D004979 2.2e-14 84.0 72 62.5
SHI28022 Sapria himalayana HOM05D004279 ORTHO05D004979 7.0e-13 79.0 73 54.8
Haze_13283 Corylus avellana HOM05D004279 ORTHO05D004979 1.2e-12 78.2 88 54.5


User provided reference genes

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