Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.12G134400 Glycine max HOM05D006520 ORTHO05D008405 5.4e-136 487.6 246 100.0
Glyma.06G270300 Glycine max HOM05D006520 ORTHO05D008405 1.7e-68 263.5 140 95.0
Phvul.011G139475 Phaseolus vulgaris HOM05D006520 ORTHO05D008405 2.0e-66 256.5 140 92.9
VMungo1127G1053 Vigna mungo HOM05D006520 ORTHO05D008405 7.7e-66 254.6 140 92.1
Lj3g0004956 Lotus japonicus HOM05D006520 ORTHO05D008405 5.2e-62 241.9 166 76.5
Medtr4g080790 Medicago truncatula HOM05D006520 ORTHO05D008405 4.9e-60 235.3 154 81.2
Ca_18859_v3 Cicer arietinum L. HOM05D006520 ORTHO05D008405 3.5e-58 229.2 167 76.0
arahy.Tifrunner.gnm1.ann1.45MNV2 Arachis hypogaea HOM05D006520 ORTHO05D008405 3.0e-57 226.1 165 73.3
Psat7g163040 Pisum sativum HOM05D006520 ORTHO05D008405 3.9e-57 225.7 140 82.9
Lalb_Chr03g0030081 Lupinus albus HOM05D006520 ORTHO05D008405 8.9e-54 214.5 140 79.3
QL08p012619 Quercus lobata HOM05D006520 ORTHO05D008405 1.7e-52 210.3 160 69.4
HanXRQChr08g0234071 Helianthus annuus HOM05D006520 ORTHO05D008405 3.2e-51 206.1 139 74.8
TAR362G1255 Trochodendron aralioides HOM05D006520 ORTHO05D008405 5.4e-51 205.3 149 71.1
MELO3C018098.2 Cucumis melo HOM05D006520 ORTHO05D008405 1.2e-50 204.1 140 73.6
Nn3g21422 Nelumbo nucifera HOM05D006520 ORTHO05D008405 1.6e-50 203.8 153 69.9
CsaV3_3G023150 Cucumis sativus L. HOM05D006520 ORTHO05D008405 3.5e-50 202.6 140 72.9
Haze_09634 Corylus avellana HOM05D006520 ORTHO05D008405 6.0e-50 201.8 157 68.2
Sopen12g001190 Solanum pennellii HOM05D006520 ORTHO05D008405 1.0e-49 201.1 158 69.6
Solyc12g005200.3 Solanum lycopersicum HOM05D006520 ORTHO05D008405 1.3e-49 200.7 158 69.0
PGSC0003DMG400001100 Solanum tuberosum HOM05D006520 ORTHO05D008405 1.3e-49 200.7 158 69.0
Peaxi162Scf01097g00110 Petunia axillaris HOM05D006520 ORTHO05D008405 1.7e-49 200.3 161 67.1
MD03G1209400 Malus domestica HOM05D006520 ORTHO05D008405 3.0e-49 199.5 140 70.7
Nitab4.5_0004600g0010 Nicotiana tabacum HOM05D006520 ORTHO05D008405 3.0e-49 199.5 140 75.0
Cfa020400 Carpinus fangiana HOM05D006520 ORTHO05D008405 5.0e-49 198.7 157 67.5
Eucgr.F00972 Eucalyptus grandis HOM05D006520 ORTHO05D008405 5.0e-49 198.7 140 70.7
CAN.G315.8 Capsicum annuum HOM05D006520 ORTHO05D008405 8.6e-49 198.0 140 73.6
Sabra11G0121700 Salix brachista HOM05D006520 ORTHO05D008405 8.6e-49 198.0 140 72.1
Cpa.g.sc1133.1 Carica papaya HOM05D006520 ORTHO05D008405 1.5e-48 197.2 140 72.1
CiPaw.11G185500 Carya illinoinensis HOM05D006520 ORTHO05D008405 1.5e-48 197.2 140 71.4
Cc05_g13380 Coffea canephora HOM05D006520 ORTHO05D008405 1.5e-48 197.2 140 71.4
SGA_v2.0_scaffold258G45796 Striga asiatica HOM05D006520 ORTHO05D008405 1.9e-48 196.8 144 70.1
TWI38G0825 Tripterygium wilfordii HOM05D006520 ORTHO05D008405 1.9e-48 196.8 140 70.7
Sabra11G0121400 Salix brachista HOM05D006520 ORTHO05D008405 2.5e-48 196.4 140 71.4
THA.LOC104817880 Tarenaya hassleriana HOM05D006520 ORTHO05D008405 2.5e-48 196.4 140 71.4
vmacro11755 Vaccinium macrocarpon HOM05D006520 ORTHO05D008405 2.5e-48 196.4 140 71.4
Potri.011G135600 Populus trichocarpa HOM05D006520 ORTHO05D008405 4.3e-48 195.7 140 71.4
Sed0027741 Sechium edule HOM05D006520 ORTHO05D008405 4.3e-48 195.7 140 70.7
ClCG05G014620 Citrullus lanatus HOM05D006520 ORTHO05D008405 5.6e-48 195.3 140 70.7
Dinv22290 Davidia involucrata HOM05D006520 ORTHO05D008405 5.6e-48 195.3 141 74.5
CsaV3_3G025190 Cucumis sativus L. HOM05D006520 ORTHO05D008405 7.3e-48 194.9 148 67.6
Lj8A167T45 Lonicera japonica HOM05D006520 ORTHO05D008405 7.3e-48 194.9 140 70.7
Os03g0835400 Oryza sativa ssp. japonica HOM05D006520 ORTHO05D008405 7.3e-48 194.9 140 68.6
Nitab4.5_0000653g0110 Nicotiana tabacum HOM05D006520 ORTHO05D008405 9.5e-48 194.5 140 74.3
SalBow6G5624 Salvia bowleyana HOM05D006520 ORTHO05D008405 9.5e-48 194.5 140 75.0
ATR0706G183 Amborella trichopoda HOM05D006520 ORTHO05D008405 1.2e-47 194.1 140 69.3
AUR62043225 Chenopodium quinoa HOM05D006520 ORTHO05D008405 1.6e-47 193.7 157 65.0
AUR62020529 Chenopodium quinoa HOM05D006520 ORTHO05D008405 3.6e-47 192.6 157 64.3
Migut.M01795 Erythranthe guttata HOM05D006520 ORTHO05D008405 4.7e-47 192.2 157 65.6
CSS0025953 Camellia sinensis var. sinensis HOM05D006520 ORTHO05D008405 6.2e-47 191.8 140 70.7
ECA246G0715 Erigeron canadensis HOM05D006520 ORTHO05D008405 6.2e-47 191.8 139 70.5
Ciclev10008777m.g Citrus clementina HOM05D006520 ORTHO05D008405 8.1e-47 191.4 149 68.5
RcHm_v2.0_Chr5g0037851 Rosa chinensis HOM05D006520 ORTHO05D008405 8.1e-47 191.4 140 69.3
Duzib213G0852 Durio zibethinus HOM05D006520 ORTHO05D008405 1.4e-46 190.7 140 69.3
Atru.chr2.3238 Acer truncatum HOM05D006520 ORTHO05D008405 3.1e-46 189.5 140 70.0
Hund18268 Selenicereus undatus HOM05D006520 ORTHO05D008405 4.0e-46 189.1 165 62.4
Aqoxy5G00708 Aquilegia oxysepala HOM05D006520 ORTHO05D008405 5.2e-46 188.7 165 61.8
COL.COLO4_09604 Corchorus olitorius HOM05D006520 ORTHO05D008405 5.2e-46 188.7 158 65.2
FAN16G1768 Fragaria x ananassa HOM05D006520 ORTHO05D008405 5.2e-46 188.7 140 68.6
FAN21G1190 Fragaria x ananassa HOM05D006520 ORTHO05D008405 5.2e-46 188.7 140 68.6
Lsat_1_v5_gn_7_65980 Lactuca sativa HOM05D006520 ORTHO05D008405 6.8e-46 188.3 140 68.6
Zm00001eb063680 Zea mays HOM05D006520 ORTHO05D008405 6.8e-46 188.3 140 66.4
DCAR_010030 Daucus carota HOM05D006520 ORTHO05D008405 8.9e-46 188.0 140 68.6
FvH4_3g22000 Fragaria vesca HOM05D006520 ORTHO05D008405 1.2e-45 187.6 140 67.9
GSVIVG01001984001 Vitis vinifera HOM05D006520 ORTHO05D008405 1.5e-45 187.2 159 63.5
Sc16g0006360 Simmondsia chinensis HOM05D006520 ORTHO05D008405 2.0e-45 186.8 140 68.6
BcaB04g17242 Brassica carinata HOM05D006520 ORTHO05D008405 2.6e-45 186.4 140 65.7
Thecc.07G046500 Theobroma cacao HOM05D006520 ORTHO05D008405 4.4e-45 185.7 154 64.3
AL1G58660 Arabidopsis lyrata HOM05D006520 ORTHO05D008405 5.8e-45 185.3 172 57.6
Carub.0001s3988 Capsella rubella HOM05D006520 ORTHO05D008405 5.8e-45 185.3 172 57.0
PSO210G5695 Papaver somniferum HOM05D006520 ORTHO05D008405 1.3e-44 184.1 143 69.2
Aa31LG10G3340 Aethionema arabicum HOM05D006520 ORTHO05D008405 1.7e-44 183.7 140 65.7
PGR083G2407 Punica granatum HOM05D006520 ORTHO05D008405 1.7e-44 183.7 140 67.1
unitig_62.g23270 Utricularia gibba HOM05D006520 ORTHO05D008405 1.7e-44 183.7 181 58.6
Ah.06g182970 Amaranthus hybridus HOM05D006520 ORTHO05D008405 2.2e-44 183.3 159 63.5
PSO832G0135 Papaver somniferum HOM05D006520 ORTHO05D008405 2.2e-44 183.3 143 68.5
CANSAT35G1182 Cannabis sativa HOM05D006520 ORTHO05D008405 2.9e-44 183.0 140 68.6
Gohir.A01G076200 Gossypium hirsutum HOM05D006520 ORTHO05D008405 2.9e-44 183.0 140 67.1
Gorai.002G084200 Gossypium raimondii HOM05D006520 ORTHO05D008405 2.9e-44 183.0 140 67.1
CiPaw.11G185700 Carya illinoinensis HOM05D006520 ORTHO05D008405 3.7e-44 182.6 159 62.3
BcaC01g01246 Brassica carinata HOM05D006520 ORTHO05D008405 4.9e-44 182.2 140 65.7
BolC3t21294H Brassica oleracea HOM05D006520 ORTHO05D008405 4.9e-44 182.2 140 65.7
BraA08t32341Z Brassica rapa HOM05D006520 ORTHO05D008405 4.9e-44 182.2 140 65.7
Gohir.D01G063700 Gossypium hirsutum HOM05D006520 ORTHO05D008405 4.9e-44 182.2 140 66.4
Oeu021407.1 Olea europaea HOM05D006520 ORTHO05D008405 8.3e-44 181.4 140 67.1
HPP92_026253 Vanilla planifolia HOM05D006520 ORTHO05D008405 8.3e-44 181.4 153 59.5
TPR.G25908 Trifolium pratense HOM05D006520 ORTHO05D008405 1.1e-43 181.0 108 85.2
AT1G50940 Arabidopsis thaliana HOM05D006520 ORTHO05D008405 1.4e-43 180.6 170 56.5
Thhalv10011599m.g Eutrema salsugineum HOM05D006520 ORTHO05D008405 1.4e-43 180.6 140 65.0
C03p89710 Brassica napus HOM05D006520 ORTHO05D008405 1.9e-43 180.3 140 65.0
A08p03100 Brassica napus HOM05D006520 ORTHO05D008405 4.1e-43 179.1 140 65.0
CARHR040980 Cardamine hirsuta HOM05D006520 ORTHO05D008405 9.2e-43 177.9 140 64.3
Sp1g37680 Schrenkiella parvula HOM05D006520 ORTHO05D008405 1.3e-41 174.1 140 64.3
AagrBONN_evm.TU.Sc2ySwM_228.3593 Anthoceros agrestis HOM05D006520 ORTHO05D008405 5.6e-40 168.7 140 62.1
Prupe.4G205700 Prunus persica HOM05D006520 ORTHO05D008405 7.3e-40 168.3 140 62.1
CsaV3_UNG094720 Cucumis sativus L. HOM05D006520 ORTHO05D008405 2.1e-39 166.8 115 73.0
SEGI_24363 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 2.8e-39 166.4 157 58.6
Pp3c15_18640 Physcomitrium patens HOM05D006520 ORTHO05D008405 1.8e-38 163.7 140 61.4
Mapoly0055s0094 Marchantia polymorpha HOM05D006520 ORTHO05D008405 5.8e-37 158.7 155 54.2
SMO169G0265 Selaginella moellendorffii HOM05D006520 ORTHO05D008405 2.1e-31 140.2 141 55.3
EL10Ac4g07934 Beta vulgaris HOM05D006520 ORTHO05D008405 1.1e-30 137.9 140 55.0
SHI31861 Sapria himalayana HOM05D006520 ORTHO05D008405 5.2e-30 135.6 140 54.3
Manes.15G075200 Manihot esculenta HOM05D006520 ORTHO05D008405 2.9e-28 129.8 79 79.7
Actinidia09928 Actinidia chinensis HOM05D006520 ORTHO05D008405 2.7e-26 123.2 79 73.4
TAR362G0323 Trochodendron aralioides HOM05D000062 ORTHO05D000043 4.3e-24 115.9 83 71.1
Cre16.g687950 Chlamydomonas reinhardtii HOM05D006520 ORTHO05D008405 3.8e-20 102.8 140 45.0
Haze_27296 Corylus avellana HOM05D006520 ORTHO05D008405 1.8e-17 94.0 140 38.6
Haze_27029 Corylus avellana HOM05D006520 ORTHO05D008405 2.3e-17 93.6 140 41.4
Actinidia27215 Actinidia chinensis HOM05D006520 ORTHO05D008405 8.1e-15 85.1 113 50.4
arahy.Tifrunner.gnm1.ann1.3QT6IB Arachis hypogaea HOM05D006520 ORTHO05D008405 5.3e-14 82.4 86 59.3
Cfa027367 Carpinus fangiana HOM05D006520 ORTHO05D008405 1.7e-12 77.4 144 35.4
PRCOL_00001901 Prasinoderma coloniale HOM05D006520 ORTHO05D008405 1.4e-11 74.3 109 42.2
CDE01G0592 Ceratophyllum demersum HOM05D006520 ORTHO05D008405 1.3e-07 61.2 38 76.3


User provided reference genes

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