Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.12G086300 Glycine max HOM05D000613 ORTHO05D000446 2.0e-62 242.3 125 100.0
Glyma.11G188100 Glycine max HOM05D000613 ORTHO05D000446 1.2e-46 189.9 107 93.5
Phvul.011G091500 Phaseolus vulgaris HOM05D000613 ORTHO05D000446 4.7e-43 177.9 107 87.9
VMungo1127G1578 Vigna mungo HOM05D000613 ORTHO05D000446 7.5e-41 170.6 107 83.2
Lalb_Chr03g0027961 Lupinus albus HOM05D000613 ORTHO05D000446 2.5e-36 155.6 112 70.5
arahy.Tifrunner.gnm1.ann1.013JYW Arachis hypogaea HOM05D000613 ORTHO05D000446 1.6e-35 152.9 107 74.8
Lj3g0004331 Lotus japonicus HOM05D000613 ORTHO05D000446 2.0e-33 146.0 107 72.9
Medtr4g055110 Medicago truncatula HOM05D000613 ORTHO05D000446 3.1e-31 138.7 105 68.6
TPR.G15581 Trifolium pratense HOM05D000613 ORTHO05D000446 1.7e-29 132.9 105 66.7
QL01p013431 Quercus lobata HOM05D000613 ORTHO05D000446 1.5e-25 119.8 126 50.8
ClCG01G012600 Citrullus lanatus HOM05D000613 ORTHO05D000446 1.4e-23 113.2 84 65.5
Ciclev10028244m.g Citrus clementina HOM05D000613 ORTHO05D000446 1.9e-23 112.8 118 54.2
AUR62009805 Chenopodium quinoa HOM05D000613 ORTHO05D000446 2.4e-23 112.5 105 55.2
CSS0044985 Camellia sinensis var. sinensis HOM05D000613 ORTHO05D000446 3.2e-23 112.1 103 53.4
CANSAT54G1868 Cannabis sativa HOM05D000613 ORTHO05D000446 3.2e-23 112.1 95 55.8
CiPaw.13G140000 Carya illinoinensis HOM05D000613 ORTHO05D000446 7.0e-23 110.9 95 58.9
TWI31G0082 Tripterygium wilfordii HOM05D000613 ORTHO05D000446 2.0e-22 109.4 95 57.9
Atru.chr3.3360 Acer truncatum HOM05D000613 ORTHO05D000446 3.5e-22 108.6 95 58.9
Potri.009G147600 Populus trichocarpa HOM05D000613 ORTHO05D000446 4.6e-22 108.2 98 56.1
EL10Ac7g15781 Beta vulgaris HOM05D000613 ORTHO05D000446 6.0e-22 107.8 105 51.4
MD03G1136100 Malus domestica HOM05D000613 ORTHO05D000446 6.0e-22 107.8 101 51.5
MELO3C004783.2 Cucumis melo HOM05D000613 ORTHO05D000446 7.8e-22 107.5 111 52.3
Duzib150G1136 Durio zibethinus HOM05D000613 ORTHO05D000446 7.8e-22 107.5 88 62.5
CsaV3_1G014570 Cucumis sativus L. HOM05D000613 ORTHO05D000446 1.0e-21 107.1 111 52.3
Sabra09G0113800 Salix brachista HOM05D000613 ORTHO05D000446 1.0e-21 107.1 112 49.1
Sabra09G0116300 Salix brachista HOM05D000613 ORTHO05D000446 1.0e-21 107.1 112 49.1
AUR62038117 Chenopodium quinoa HOM05D000613 ORTHO05D000446 1.7e-21 106.3 105 53.3
Dinv12513 Davidia involucrata HOM05D000613 ORTHO05D000446 1.7e-21 106.3 105 53.3
Psat7g189920 Pisum sativum HOM05D000613 ORTHO05D000446 3.0e-21 105.5 83 69.9
FAN16G0170 Fragaria x ananassa HOM05D000613 ORTHO05D000446 5.0e-21 104.8 88 59.1
Manes.11G158700 Manihot esculenta HOM05D000613 ORTHO05D000446 5.0e-21 104.8 84 65.5
Prupe.6G120800 Prunus persica HOM05D000613 ORTHO05D000446 5.0e-21 104.8 112 45.5
Carub.0004s0851 Capsella rubella HOM05D000613 ORTHO05D000446 6.6e-21 104.4 105 52.4
Gohir.D09G093500 Gossypium hirsutum HOM05D000613 ORTHO05D000446 8.6e-21 104.0 88 60.2
Gorai.006G110100 Gossypium raimondii HOM05D000613 ORTHO05D000446 8.6e-21 104.0 88 60.2
Hma1.2p1_0695F.1_g204450 Hydrangea macrophylla HOM05D000613 ORTHO05D000446 1.1e-20 103.6 95 55.8
Sopen11g026680 Solanum pennellii HOM05D000613 ORTHO05D000446 1.1e-20 103.6 88 59.1
Gohir.A09G093800 Gossypium hirsutum HOM05D000613 ORTHO05D000446 1.9e-20 102.8 88 59.1
unitig_747.g21951 Utricularia gibba HOM05D000613 ORTHO05D000446 1.9e-20 102.8 99 50.5
Eucgr.J00446 Eucalyptus grandis HOM05D000613 ORTHO05D000446 2.5e-20 102.4 87 57.5
Thecc.09G290100 Theobroma cacao HOM05D000613 ORTHO05D000446 2.5e-20 102.4 88 60.2
GSVIVG01031386001 Vitis vinifera HOM05D000613 ORTHO05D000446 2.5e-20 102.4 100 55.0
BcaC02g08231 Brassica carinata HOM05D000613 ORTHO05D000446 3.3e-20 102.1 84 59.5
C04p56910 Brassica napus HOM05D000613 ORTHO05D000446 3.3e-20 102.1 84 59.5
BolC4t27227H Brassica oleracea HOM05D000613 ORTHO05D000446 3.3e-20 102.1 84 59.5
Dinv29436 Davidia involucrata HOM05D000613 ORTHO05D000446 3.3e-20 102.1 95 53.7
RcHm_v2.0_Chr5g0055011 Rosa chinensis HOM05D000613 ORTHO05D000446 3.3e-20 102.1 105 48.6
AUR62043078 Chenopodium quinoa HOM05D000613 ORTHO05D000446 4.3e-20 101.7 105 51.4
THA.LOC104800550 Tarenaya hassleriana HOM05D000613 ORTHO05D000446 5.6e-20 101.3 84 58.3
AT2G27760 Arabidopsis thaliana HOM05D000613 ORTHO05D000446 7.3e-20 100.9 95 52.6
Solyc11g066960.3 Solanum lycopersicum HOM05D000613 ORTHO05D000446 7.3e-20 100.9 88 58.0
AL4G22540 Arabidopsis lyrata HOM05D000613 ORTHO05D000446 9.5e-20 100.5 102 52.9
FvH4_3g29650 Fragaria vesca HOM05D000613 ORTHO05D000446 9.5e-20 100.5 88 56.8
Nn7g38261 Nelumbo nucifera HOM05D000613 ORTHO05D000446 9.5e-20 100.5 103 49.5
Eucgr.J00445 Eucalyptus grandis HOM05D000613 ORTHO05D000446 1.6e-19 99.8 88 54.5
FAN11G3077 Fragaria x ananassa HOM05D000613 ORTHO05D000446 1.6e-19 99.8 88 56.8
Nitab4.5_0006089g0050 Nicotiana tabacum HOM05D000613 ORTHO05D000446 1.6e-19 99.8 85 61.2
Nitab4.5_0011810g0010 Nicotiana tabacum HOM05D000613 ORTHO05D000446 1.6e-19 99.8 85 61.2
COL.COLO4_19960 Corchorus olitorius HOM05D000613 ORTHO05D000446 2.1e-19 99.4 90 56.7
Sp4g10590 Schrenkiella parvula HOM05D000613 ORTHO05D000446 2.8e-19 99.0 109 48.6
CAN.G644.22 Capsicum annuum HOM05D000613 ORTHO05D000446 4.7e-19 98.2 85 57.6
CARHR120460 Cardamine hirsuta HOM05D000613 ORTHO05D000446 4.7e-19 98.2 110 49.1
Aa31LG5G8240 Aethionema arabicum HOM05D000613 ORTHO05D000446 6.2e-19 97.8 92 55.4
Cc01_g09670 Coffea canephora HOM05D000613 ORTHO05D000446 8.0e-19 97.4 77 64.9
Oeu058280.1 Olea europaea HOM05D000613 ORTHO05D000446 8.0e-19 97.4 95 55.8
PSO384G3251 Papaver somniferum HOM05D000613 ORTHO05D000446 8.0e-19 97.4 85 52.9
Peaxi162Scf00002g05433 Petunia axillaris HOM05D000613 ORTHO05D000446 8.0e-19 97.4 85 57.6
HanXRQChr11g0345911 Helianthus annuus HOM05D000613 ORTHO05D000446 1.1e-18 97.1 106 50.0
Sc21g0004740 Simmondsia chinensis HOM05D000613 ORTHO05D000446 1.1e-18 97.1 85 56.5
TAR633G1306 Trochodendron aralioides HOM05D000613 ORTHO05D000446 1.4e-18 96.7 95 51.6
A04p21110 Brassica napus HOM05D000613 ORTHO05D000446 1.8e-18 96.3 84 56.0
BraA04t17680Z Brassica rapa HOM05D000613 ORTHO05D000446 4.0e-18 95.1 84 54.8
ECA248G3409 Erigeron canadensis HOM05D000613 ORTHO05D000446 4.0e-18 95.1 83 57.8
FAN25G2504 Fragaria x ananassa HOM05D000613 ORTHO05D000446 5.2e-18 94.7 83 56.6
Thhalv10016598m.g Eutrema salsugineum HOM05D000613 ORTHO05D000446 6.8e-18 94.4 107 45.8
Lsat_1_v5_gn_1_62120 Lactuca sativa HOM05D000613 ORTHO05D000446 6.8e-18 94.4 67 67.2
SalBow6G3775 Salvia bowleyana HOM05D000613 ORTHO05D000446 1.2e-17 93.6 88 53.4
Aqoxy2G01362 Aquilegia oxysepala HOM05D000613 ORTHO05D000446 1.5e-17 93.2 82 56.1
PSO443G0071 Papaver somniferum HOM05D000613 ORTHO05D000446 1.5e-17 93.2 98 51.0
vmacro14361 Vaccinium macrocarpon HOM05D000613 ORTHO05D000446 1.5e-17 93.2 88 48.9
PGR119G0205 Punica granatum HOM05D000613 ORTHO05D000446 2.6e-17 92.4 100 51.0
SalBow7G2121 Salvia bowleyana HOM05D000613 ORTHO05D000446 2.6e-17 92.4 88 52.3
Hund18732 Selenicereus undatus HOM05D000613 ORTHO05D000446 2.6e-17 92.4 85 55.3
BcaB06g28166 Brassica carinata HOM05D000613 ORTHO05D000446 1.3e-16 90.1 84 53.6
Rhsim01G0207200 Rhododendron simsii HOM05D000613 ORTHO05D000446 1.3e-16 90.1 118 44.1
Migut.D02360 Erythranthe guttata HOM05D000613 ORTHO05D000446 1.9e-15 86.3 69 63.8
DCAR_012174 Daucus carota HOM05D000613 ORTHO05D000446 2.1e-14 82.8 109 39.4
ATR1096G040 Amborella trichopoda HOM05D000613 ORTHO05D000446 1.0e-13 80.5 86 50.0
Ca_19380_v3 Cicer arietinum L. HOM05D000613 ORTHO05D000446 3.0e-13 79.0 122 46.7
PGSC0003DMG400026541 Solanum tuberosum HOM05D000613 ORTHO05D000446 8.6e-13 77.4 83 49.4
HPP92_009047 Vanilla planifolia HOM05D000613 ORTHO05D000446 4.3e-12 75.1 102 40.2
Lj2A992T23 Lonicera japonica HOM05D000613 ORTHO05D000446 6.8e-10 67.8 48 64.6
Oeu013233.1 Olea europaea HOM05D000613 ORTHO05D000446 2.9e-08 62.4 71 43.7
PSO063G5793 Papaver somniferum HOM05D000613 ORTHO05D000446 3.7e-08 62.0 79 45.6
PSO421G0542 Papaver somniferum HOM05D000613 ORTHO05D000446 1.1e-07 60.5 79 44.3
SHI06113 Sapria himalayana HOM05D000613 ORTHO05D000446 1.9e-07 59.7 103 39.8
MBI17_g19797_MAGBIO Magnolia biondii HOM05D000613 ORTHO05D000446 3.2e-07 58.9 83 45.8
Sc19g0004570 Simmondsia chinensis HOM05D000613 ORTHO05D000446 3.2e-07 58.9 70 41.4
Oeu057717.1 Olea europaea HOM05D000613 ORTHO05D000446 5.4e-07 58.2 100 38.0
CDE05G1315 Ceratophyllum demersum HOM05D000613 ORTHO05D000446 7.1e-07 57.8 110 34.5
TAR362G0655 Trochodendron aralioides HOM05D000613 ORTHO05D000446 1.2e-06 57.0 117 31.6
HPP92_027825 Vanilla planifolia HOM05D000613 ORTHO05D000446 1.2e-06 57.0 95 32.6
Cpa.g.sc47.71 Carica papaya HOM05D000613 ORTHO05D000446 1.6e-06 56.6 93 38.7
ClCG07G000200 Citrullus lanatus HOM05D000613 ORTHO05D000446 1.6e-06 56.6 82 36.6
AUR62030078 Chenopodium quinoa HOM05D000613 ORTHO05D000446 2.1e-06 56.2 82 39.0
Rhsim02G0019800 Rhododendron simsii HOM05D000613 ORTHO05D000446 2.1e-06 56.2 113 32.7
MSTRG.2230 Avicennia marina HOM05D000613 ORTHO05D000446 2.7e-06 55.8 86 38.4
BcaC09g48875 Brassica carinata HOM05D000613 ORTHO05D000446 2.7e-06 55.8 70 38.6
A01p35370 Brassica napus HOM05D000613 ORTHO05D000446 2.7e-06 55.8 70 38.6
C01p44880 Brassica napus HOM05D000613 ORTHO05D000446 2.7e-06 55.8 70 38.6
BolC1t04456H Brassica oleracea HOM05D000613 ORTHO05D000446 2.7e-06 55.8 70 38.6
BraA01t03618Z Brassica rapa HOM05D000613 ORTHO05D000446 2.7e-06 55.8 70 38.6
AUR62038224 Chenopodium quinoa HOM05D000613 ORTHO05D000446 2.7e-06 55.8 82 37.8
Peaxi162Scf00095g00121 Petunia axillaris HOM05D000613 ORTHO05D000446 2.7e-06 55.8 72 43.1
EL10Ac3g06345 Beta vulgaris HOM05D000613 ORTHO05D000446 3.5e-06 55.5 73 41.1
Migut.E00350 Erythranthe guttata HOM05D000613 ORTHO05D000446 3.5e-06 55.5 75 42.7
DCAR_023653 Daucus carota HOM05D000613 ORTHO05D000446 4.6e-06 55.1 75 38.7
ECA248G0389 Erigeron canadensis HOM05D000613 ORTHO05D000446 4.6e-06 55.1 82 39.0
HanXRQChr03g0072551 Helianthus annuus HOM05D000613 ORTHO05D000446 4.6e-06 55.1 77 37.7
SHI26280 Sapria himalayana HOM05D000613 ORTHO05D000446 4.6e-06 55.1 84 39.3
Thecc.02G299100 Theobroma cacao HOM05D000613 ORTHO05D000446 4.6e-06 55.1 107 32.7
Cc03_g03080 Coffea canephora HOM05D000613 ORTHO05D000446 6.0e-06 54.7 71 42.3
MBI17_g12010_MAGBIO Magnolia biondii HOM05D000613 ORTHO05D000446 6.0e-06 54.7 72 44.4
BcaB04g20719 Brassica carinata HOM05D000613 ORTHO05D000446 7.8e-06 54.3 67 38.8
ClCG06G005800 Citrullus lanatus HOM05D000613 ORTHO05D000446 7.8e-06 54.3 73 39.7
Duzib268G0072 Durio zibethinus HOM05D000613 ORTHO05D000446 7.8e-06 54.3 86 37.2
Rhsim13G0023400 Rhododendron simsii HOM05D000613 ORTHO05D000446 7.8e-06 54.3 71 40.8
Sc13g0003940 Simmondsia chinensis HOM05D000613 ORTHO05D000446 7.8e-06 54.3 71 40.8
Thecc.02G302400 Theobroma cacao HOM05D000613 ORTHO05D000446 7.8e-06 54.3 73 39.7


User provided reference genes

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