Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.12G080600 Glycine max HOM05D006101 ORTHO05D007422 3.8e-257 891.0 439 100.0
Glyma.11G193400 Glycine max HOM05D006101 ORTHO05D007422 9.9e-165 583.9 373 81.5
Phvul.011G085500 Phaseolus vulgaris HOM05D006101 ORTHO05D007422 1.5e-157 560.1 371 77.4
VMungo1127G1509 Vigna mungo HOM05D006101 ORTHO05D007422 6.7e-153 544.7 372 75.5
Lj3g0002990 Lotus japonicus HOM05D006101 ORTHO05D007422 1.6e-146 523.5 370 73.2
Lalb_Chr19g0136961 Lupinus albus HOM05D006101 ORTHO05D007422 7.4e-144 514.6 373 70.8
Ca_30122_v3 Cicer arietinum L. HOM05D006101 ORTHO05D007422 3.9e-137 492.3 368 68.5
Psat0s1387g0080 Pisum sativum HOM05D006101 ORTHO05D007422 5.5e-131 471.9 367 66.2
Ca_02469_v3 Cicer arietinum L. HOM05D006101 ORTHO05D007422 3.6e-130 469.2 368 66.6
Medtr4g057493 Medicago truncatula HOM05D006101 ORTHO05D007422 2.3e-129 466.5 368 64.9
Atru.chr3.3528 Acer truncatum HOM05D006101 ORTHO05D007422 8.0e-98 361.7 374 50.0
Manes.04G013700 Manihot esculenta HOM05D006101 ORTHO05D007422 4.9e-95 352.4 371 48.8
Cfa010291 Carpinus fangiana HOM05D006101 ORTHO05D007422 2.0e-93 347.1 462 41.6
Potri.009G006200 Populus trichocarpa HOM05D006101 ORTHO05D007422 2.7e-93 346.7 408 44.4
QL01p015279 Quercus lobata HOM05D006101 ORTHO05D007422 1.3e-92 344.4 370 47.3
GSVIVG01031479001 Vitis vinifera HOM05D006101 ORTHO05D007422 5.0e-92 342.4 388 46.1
CiPaw.13G123600 Carya illinoinensis HOM05D006101 ORTHO05D007422 1.1e-89 334.7 382 46.1
Prupe.6G111800 Prunus persica HOM05D006101 ORTHO05D007422 1.2e-88 331.3 370 46.8
Ciclev10028403m.g Citrus clementina HOM05D006101 ORTHO05D007422 1.5e-88 330.9 418 42.8
Haze_23705 Corylus avellana HOM05D006101 ORTHO05D007422 1.5e-88 330.9 369 48.0
TAR636G3121 Trochodendron aralioides HOM05D006101 ORTHO05D007422 1.3e-87 327.8 379 45.9
Thecc.09G350300 Theobroma cacao HOM05D006101 ORTHO05D007422 8.3e-87 325.1 374 43.9
Dinv16214 Davidia involucrata HOM05D006101 ORTHO05D007422 1.4e-86 324.3 374 48.9
COL.COLO4_11107 Corchorus olitorius HOM05D006101 ORTHO05D007422 4.1e-86 322.8 370 45.1
Duzib150G0708 Durio zibethinus HOM05D006101 ORTHO05D007422 2.1e-85 320.5 374 44.4
TWI75G1238 Tripterygium wilfordii HOM05D006101 ORTHO05D007422 2.1e-85 320.5 365 46.8
MD11G1147300 Malus domestica HOM05D006101 ORTHO05D007422 2.7e-85 320.1 364 45.1
ClCG03G002470 Citrullus lanatus HOM05D006101 ORTHO05D007422 1.5e-83 314.3 374 43.6
THA.LOC104800579 Tarenaya hassleriana HOM05D006101 ORTHO05D007422 1.5e-83 314.3 366 45.4
CsaV3_1G013150 Cucumis sativus L. HOM05D006101 ORTHO05D007422 1.9e-83 313.9 374 44.4
FvH4_3g30770 Fragaria vesca HOM05D006101 ORTHO05D007422 9.5e-83 311.6 370 46.8
Sed0008610 Sechium edule HOM05D006101 ORTHO05D007422 3.6e-82 309.7 369 43.4
CSS0020443 Camellia sinensis var. sinensis HOM05D006101 ORTHO05D007422 8.1e-82 308.5 418 42.1
Gohir.D03G139000 Gossypium hirsutum HOM05D006101 ORTHO05D007422 1.8e-81 307.4 371 43.1
Gohir.A03G029500 Gossypium hirsutum HOM05D006101 ORTHO05D007422 8.9e-81 305.1 371 42.9
RcHm_v2.0_Chr5g0056961 Rosa chinensis HOM05D006101 ORTHO05D007422 2.0e-80 303.9 370 46.2
Gorai.003G145800 Gossypium raimondii HOM05D006101 ORTHO05D007422 5.8e-80 302.4 371 43.1
Nn2g13844 Nelumbo nucifera HOM05D006101 ORTHO05D007422 9.9e-80 301.6 373 44.0
MELO3C004994.2 Cucumis melo HOM05D006101 ORTHO05D007422 2.2e-79 300.4 395 42.3
Carub.0004s0893 Capsella rubella HOM05D006101 ORTHO05D007422 1.1e-78 298.1 413 39.2
FAN11G1700 Fragaria x ananassa HOM05D002446 ORTHO05D007422 2.4e-78 297.0 374 45.2
Actinidia03696 Actinidia chinensis HOM05D006101 ORTHO05D007422 7.1e-78 295.4 376 45.7
BcaB02g10150 Brassica carinata HOM05D006101 ORTHO05D007422 7.1e-78 295.4 415 39.3
Sp4g10940 Schrenkiella parvula HOM05D006101 ORTHO05D007422 9.2e-78 295.0 413 40.0
CANSAT56G2622 Cannabis sativa HOM05D006101 ORTHO05D007422 7.8e-77 292.0 366 45.1
FAN16G0923 Fragaria x ananassa HOM05D006101 ORTHO05D007422 2.3e-76 290.4 370 44.6
FAN25G1259 Fragaria x ananassa HOM05D006101 ORTHO05D007422 6.6e-76 288.9 374 44.1
AT2G28130 Arabidopsis thaliana HOM05D006101 ORTHO05D007422 8.6e-76 288.5 415 38.8
Lj2C1009G5 Lonicera japonica HOM05D006101 ORTHO05D007422 1.9e-75 287.3 371 43.4
BcaC02g10947 Brassica carinata HOM05D006101 ORTHO05D007422 3.3e-75 286.6 413 38.3
FAN21G1086 Fragaria x ananassa HOM05D006101 ORTHO05D007422 7.3e-75 285.4 370 45.4
arahy.Tifrunner.gnm1.ann1.P58SHS Arachis hypogaea HOM05D006101 ORTHO05D007422 1.2e-74 284.6 385 46.2
arahy.Tifrunner.gnm1.ann1.V5BWPF Arachis hypogaea HOM05D006101 ORTHO05D007422 1.6e-74 284.3 385 45.7
PGR102G2892 Punica granatum HOM05D006101 ORTHO05D007422 1.6e-74 284.3 364 42.3
MSTRG.21091 Avicennia marina HOM05D006101 ORTHO05D007422 5.2e-73 279.3 370 41.6
Solyc11g066340.2 Solanum lycopersicum HOM05D006101 ORTHO05D007422 8.9e-73 278.5 374 38.5
Sc06g0010850 Simmondsia chinensis HOM05D006101 ORTHO05D007422 5.8e-72 275.8 384 41.4
Migut.D02287 Erythranthe guttata HOM05D006101 ORTHO05D007422 7.6e-72 275.4 379 41.4
Sopen11g026080 Solanum pennellii HOM05D006101 ORTHO05D007422 1.7e-71 274.2 374 38.2
Dinv29372 Davidia involucrata HOM05D006101 ORTHO05D007422 2.2e-71 273.9 341 45.7
Thhalv10016576m.g Eutrema salsugineum HOM05D006101 ORTHO05D007422 2.9e-71 273.5 428 37.6
CSS0026133 Camellia sinensis var. sinensis HOM05D006101 ORTHO05D007422 3.8e-71 273.1 366 40.4
Aa31LG5G8010 Aethionema arabicum HOM05D006101 ORTHO05D007422 6.4e-71 272.3 370 41.1
Nitab4.5_0000329g0130 Nicotiana tabacum HOM05D006101 ORTHO05D007422 8.4e-71 271.9 373 38.6
C04p23380 Brassica napus HOM05D006101 ORTHO05D007422 1.9e-70 270.8 413 37.5
CAN.G546.34 Capsicum annuum HOM05D006101 ORTHO05D007422 1.9e-70 270.8 373 38.6
AL4G22020 Arabidopsis lyrata HOM05D006101 ORTHO05D007422 4.2e-70 269.6 413 37.3
BraA07t29579Z Brassica rapa HOM05D006101 ORTHO05D007422 5.4e-70 269.2 413 37.3
Eucgr.B03934 Eucalyptus grandis HOM05D006101 ORTHO05D007422 1.6e-69 267.7 365 40.5
Aqoxy1G01111 Aquilegia oxysepala HOM05D006101 ORTHO05D007422 2.1e-69 267.3 384 40.6
Hma1.2p1_0051F.1_g029390 Hydrangea macrophylla HOM05D006101 ORTHO05D007422 2.1e-69 267.3 357 42.3
BolC4t23840H Brassica oleracea HOM05D006101 ORTHO05D007422 2.7e-69 266.9 413 37.5
Lsat_1_v5_gn_6_44300 Lactuca sativa HOM05D006101 ORTHO05D007422 4.6e-69 266.2 373 39.7
PSO063G0796 Papaver somniferum HOM05D006101 ORTHO05D007422 1.0e-68 265.0 407 41.0
HanXRQChr13g0396251 Helianthus annuus HOM05D006101 ORTHO05D007422 1.3e-68 264.6 372 39.2
A07p18660 Brassica napus HOM05D006101 ORTHO05D007422 1.7e-68 264.2 425 35.8
Sabra09G0003500 Salix brachista HOM05D006101 ORTHO05D007422 2.3e-68 263.8 287 44.9
CARHR120970 Cardamine hirsuta HOM05D006101 ORTHO05D007422 3.9e-68 263.1 413 37.5
PGSC0003DMG400000413 Solanum tuberosum HOM05D006101 ORTHO05D007422 3.9e-68 263.1 370 37.8
PSO339G3309 Papaver somniferum HOM05D006101 ORTHO05D007422 5.1e-68 262.7 406 41.6
DCAR_018770 Daucus carota HOM05D006101 ORTHO05D007422 2.5e-67 260.4 368 42.1
Oeu007313.2 Olea europaea HOM05D006101 ORTHO05D007422 7.3e-67 258.8 409 38.1
Hund08365 Selenicereus undatus HOM05D006101 ORTHO05D007422 6.9e-65 252.3 353 40.5
arahy.Tifrunner.gnm1.ann1.66BK9V Arachis hypogaea HOM05D006101 ORTHO05D007422 4.4e-64 249.6 362 43.9
SalBow4G3219 Salvia bowleyana HOM05D006101 ORTHO05D007422 2.2e-63 247.3 368 40.2
Rhsim01G0211100 Rhododendron simsii HOM05D006101 ORTHO05D007422 1.9e-62 244.2 376 40.4
SGA_v2.0_scaffold27G11561 Striga asiatica HOM05D006101 ORTHO05D007422 4.2e-62 243.0 385 38.7
Peaxi162Scf00086g01114 Petunia axillaris HOM05D006101 ORTHO05D007422 7.1e-62 242.3 367 36.8
Cc01_g10370 Coffea canephora HOM05D006101 ORTHO05D007422 1.6e-61 241.1 377 37.4
CDE09G0605 Ceratophyllum demersum HOM05D006101 ORTHO05D007422 2.7e-61 240.4 424 38.4
EL10Ac9g22610 Beta vulgaris HOM05D006101 ORTHO05D007422 4.8e-58 229.6 431 35.7
MBI13_g39328_MAGBIO Magnolia biondii HOM05D006101 ORTHO05D007422 6.2e-58 229.2 388 37.1
arahy.Tifrunner.gnm1.ann1.PH2QKZ Arachis hypogaea HOM05D006101 ORTHO05D007422 1.8e-57 227.6 210 58.1
ATR0088G017 Amborella trichopoda HOM05D006101 ORTHO05D007422 2.6e-56 223.8 349 36.1
AUR62029180 Chenopodium quinoa HOM05D006101 ORTHO05D007422 1.6e-53 214.5 412 34.7
HPP92_020176 Vanilla planifolia HOM05D006101 ORTHO05D007422 4.6e-53 213.0 369 35.0
ECA233G2185 Erigeron canadensis HOM05D006101 ORTHO05D007422 6.7e-52 209.1 373 34.9
vmacro14396 Vaccinium macrocarpon HOM05D006101 ORTHO05D007422 8.7e-52 208.8 376 36.2
Nitab4.5_0003880g0040 Nicotiana tabacum HOM05D006101 ORTHO05D007422 1.9e-51 207.6 357 34.7
Os01g0241100 Oryza sativa ssp. japonica HOM05D006101 ORTHO05D007422 6.9e-49 199.1 377 35.5
SHI06228 Sapria himalayana HOM05D006101 ORTHO05D007422 1.6e-45 188.0 216 44.9
VMungo1215G2511 Vigna mungo HOM05D006101 ORTHO05D007422 2.1e-42 177.6 338 37.0
HanXRQChr04g0111151 Helianthus annuus HOM05D006101 ORTHO05D007422 1.7e-39 167.9 320 33.8
unitig_747.g21973 Utricularia gibba HOM05D006101 ORTHO05D007422 1.7e-39 167.9 277 34.3
Ah.01g014140 Amaranthus hybridus HOM05D006101 ORTHO05D007422 1.1e-38 165.2 445 29.4
Zm00001eb118850 Zea mays HOM05D006101 ORTHO05D007422 1.3e-34 151.8 184 44.0
Hma1.2p1_0051F.1_g029400 Hydrangea macrophylla HOM05D006101 ORTHO05D007422 4.5e-32 143.3 134 51.5
arahy.Tifrunner.gnm1.ann1.KM9ELV Arachis hypogaea HOM05D006101 ORTHO05D007422 1.9e-30 137.9 193 42.0
Actinidia20431 Actinidia chinensis HOM05D006101 ORTHO05D007422 1.8e-25 121.3 113 51.3
Glyma.09G075800 Glycine max HOM05D006101 ORTHO05D007422 5.9e-24 116.3 60 96.7
AUR62014957 Chenopodium quinoa HOM05D006101 ORTHO05D007422 2.1e-21 107.8 334 26.9
arahy.Tifrunner.gnm1.ann1.AAV4SA Arachis hypogaea HOM05D006101 ORTHO05D007422 1.5e-19 101.7 70 74.3
SHI06230 Sapria himalayana HOM05D006101 ORTHO05D007422 1.7e-18 98.2 149 38.9
arahy.Tifrunner.gnm1.ann1.EU9JMW Arachis hypogaea HOM05D006101 ORTHO05D007422 6.3e-18 96.3 146 45.2
Pp3c4_7040 Physcomitrium patens HOM05D006101 ORTHO05D007422 1.1e-17 95.5 336 25.9
Mapoly0094s0062 Marchantia polymorpha HOM05D006101 ORTHO05D007422 9.1e-17 92.4 299 26.4
arahy.Tifrunner.gnm1.ann1.88XJ4T Arachis hypogaea HOM05D006101 ORTHO05D007422 3.6e-13 80.5 68 61.8
SEGI_30921 Sequoiadendron giganteum HOM05D006101 ORTHO05D007422 3.3e-11 73.9 214 26.2
SMO351G0356 Selaginella moellendorffii HOM05D006101 ORTHO05D007422 2.2e-07 61.2 213 25.4
AagrBONN_evm.TU.Sc2ySwM_228.2481 Anthoceros agrestis HOM05D006101 ORTHO05D007422 5.0e-07 60.1 301 23.6


User provided reference genes

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