Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.12G067600 Glycine max HOM05D006634 ORTHO05D008282 1.4e-41 172.6 88 100.0
Glyma.11G146700 Glycine max HOM05D006634 ORTHO05D008282 1.5e-35 152.5 79 96.2
Phvul.011G079100 Phaseolus vulgaris HOM05D006634 ORTHO05D008282 4.0e-33 144.4 79 89.9
TPR.G15540 Trifolium pratense HOM05D006634 ORTHO05D008282 1.3e-31 139.4 81 87.7
Psat7g225160 Pisum sativum HOM05D006634 ORTHO05D008282 3.8e-31 137.9 81 87.7
Medtr4g459450 Medicago truncatula HOM05D006634 ORTHO05D008282 1.1e-30 136.3 81 85.2
Lj3g0007397 Lotus japonicus HOM05D006634 ORTHO05D008282 5.5e-30 134.0 81 84.0
Lalb_Chr19g0137281 Lupinus albus HOM05D006634 ORTHO05D008282 2.7e-29 131.7 81 81.5
arahy.Tifrunner.gnm1.ann1.RYN47D Arachis hypogaea HOM05D006634 ORTHO05D008282 1.9e-27 125.6 81 79.0
CiPaw.13G113000 Carya illinoinensis HOM05D006634 ORTHO05D008282 3.7e-26 121.3 85 69.4
arahy.Tifrunner.gnm1.ann1.8AEA4E Arachis hypogaea HOM05D006634 ORTHO05D008282 1.1e-25 119.8 90 70.0
TWI79G0418 Tripterygium wilfordii HOM05D006634 ORTHO05D008282 2.4e-25 118.6 84 70.2
GSVIVG01025186001 Vitis vinifera HOM05D006634 ORTHO05D008282 4.0e-25 117.9 85 68.2
Gohir.A08G197800 Gossypium hirsutum HOM05D006634 ORTHO05D008282 6.9e-25 117.1 79 72.2
Prupe.6G101400 Prunus persica HOM05D006634 ORTHO05D008282 6.9e-25 117.1 85 69.4
RcHm_v2.0_Chr5g0059081 Rosa chinensis HOM05D006634 ORTHO05D008282 6.9e-25 117.1 85 69.4
Gorai.004G228800 Gossypium raimondii HOM05D006634 ORTHO05D008282 9.0e-25 116.7 79 72.2
PGR102G2188 Punica granatum HOM05D006634 ORTHO05D008282 1.5e-24 115.9 85 67.1
Gohir.A05G103000 Gossypium hirsutum HOM05D006634 ORTHO05D008282 2.0e-24 115.5 85 69.4
Hma1.2p1_0058F.1_g032540 Hydrangea macrophylla HOM05D006634 ORTHO05D008282 2.0e-24 115.5 81 69.1
SalBow3G1265 Salvia bowleyana HOM05D006634 ORTHO05D008282 2.0e-24 115.5 79 69.6
Ciclev10029701m.g Citrus clementina HOM05D006634 ORTHO05D008282 2.6e-24 115.2 85 67.1
MD11G1136000 Malus domestica HOM05D006634 ORTHO05D008282 3.4e-24 114.8 83 68.7
Gorai.009G107000 Gossypium raimondii HOM05D006634 ORTHO05D008282 4.5e-24 114.4 85 69.4
Lalb_Chr03g0027351 Lupinus albus HOM05D006634 ORTHO05D008282 4.5e-24 114.4 77 79.2
Atru.chr3.3630 Acer truncatum HOM05D006634 ORTHO05D008282 7.6e-24 113.6 85 67.1
Gohir.D08G215200 Gossypium hirsutum HOM05D006634 ORTHO05D008282 1.3e-23 112.8 79 70.9
Dinv32744 Davidia involucrata HOM05D006634 ORTHO05D008282 1.7e-23 112.5 85 64.7
CSS0041274 Camellia sinensis var. sinensis HOM05D006634 ORTHO05D008282 2.9e-23 111.7 85 67.1
Duzib150G1350 Durio zibethinus HOM05D006634 ORTHO05D008282 2.9e-23 111.7 85 69.4
Gohir.D05G102700 Gossypium hirsutum HOM05D006634 ORTHO05D008282 2.9e-23 111.7 85 68.2
MD03G1117700 Malus domestica HOM05D006634 ORTHO05D008282 6.5e-23 110.5 83 65.1
CANSAT54G0287 Cannabis sativa HOM05D006634 ORTHO05D008282 8.4e-23 110.2 85 65.9
CANSAT54G1094 Cannabis sativa HOM05D006634 ORTHO05D008282 8.4e-23 110.2 85 65.9
CDE06G1545 Ceratophyllum demersum HOM05D006634 ORTHO05D008282 1.1e-22 109.8 82 65.9
CANSAT54G0497 Cannabis sativa HOM05D006634 ORTHO05D008282 1.4e-22 109.4 86 64.0
CANSAT54G1359 Cannabis sativa HOM05D006634 ORTHO05D008282 1.4e-22 109.4 86 64.0
CANSAT54G1657 Cannabis sativa HOM05D006634 ORTHO05D008282 1.4e-22 109.4 86 64.0
CANSAT54G2640 Cannabis sativa HOM05D006634 ORTHO05D008282 1.4e-22 109.4 86 64.0
CANSAT54G2841 Cannabis sativa HOM05D006634 ORTHO05D008282 1.4e-22 109.4 86 64.0
Duzib168G0710 Durio zibethinus HOM05D006634 ORTHO05D008282 1.4e-22 109.4 85 67.1
Rhsim01G0216700 Rhododendron simsii HOM05D006634 ORTHO05D008282 1.4e-22 109.4 81 70.4
Thecc.09G340600 Theobroma cacao HOM05D006634 ORTHO05D008282 1.9e-22 109.0 79 70.9
THA.LOC104800608 Tarenaya hassleriana HOM05D006634 ORTHO05D008282 3.2e-22 108.2 85 65.9
unitig_21.g20301 Utricularia gibba HOM05D006634 ORTHO05D008282 3.2e-22 108.2 79 65.8
Sed0017465 Sechium edule HOM05D006634 ORTHO05D008282 4.2e-22 107.8 85 62.4
CSS0031934 Camellia sinensis var. sinensis HOM05D006634 ORTHO05D008282 5.5e-22 107.5 85 64.7
Nn2g10789 Nelumbo nucifera HOM05D006634 ORTHO05D008282 7.1e-22 107.1 85 64.7
CANSAT54G1506 Cannabis sativa HOM05D006634 ORTHO05D008282 2.1e-21 105.5 86 62.8
Oeu002870.2 Olea europaea HOM05D006634 ORTHO05D008282 6.1e-21 104.0 81 63.0
CDE07G0066 Ceratophyllum demersum HOM05D006634 ORTHO05D008282 1.0e-20 103.2 80 65.0
DCAR_018812 Daucus carota HOM05D006634 ORTHO05D008282 1.3e-20 102.8 80 63.8
vmacro14436 Vaccinium macrocarpon HOM05D006634 ORTHO05D008282 2.3e-20 102.1 81 65.4
FAN21G3892 Fragaria x ananassa HOM05D006634 ORTHO05D008282 3.0e-20 101.7 85 58.8
Sp4g11250 Schrenkiella parvula HOM05D006634 ORTHO05D008282 3.0e-20 101.7 85 63.5
AL4G21590 Arabidopsis lyrata HOM05D006634 ORTHO05D008282 3.9e-20 101.3 85 63.5
ClCG03G001830 Citrullus lanatus HOM05D006634 ORTHO05D008282 3.9e-20 101.3 84 60.7
Aa31LG5G7790 Aethionema arabicum HOM05D006634 ORTHO05D008282 5.1e-20 100.9 85 64.7
Nitab4.5_0000650g0190 Nicotiana tabacum HOM05D006634 ORTHO05D008282 6.7e-20 100.5 85 64.7
CARHR121380 Cardamine hirsuta HOM05D006634 ORTHO05D008282 8.7e-20 100.1 85 63.5
CsaV3_1G033740 Cucumis sativus L. HOM05D006634 ORTHO05D008282 8.7e-20 100.1 86 58.1
Eucgr.B02497 Eucalyptus grandis HOM05D006634 ORTHO05D008282 1.1e-19 99.8 85 61.2
Manes.11G145100 Manihot esculenta HOM05D006634 ORTHO05D008282 1.5e-19 99.4 83 61.4
Potri.004G210800 Populus trichocarpa HOM05D006634 ORTHO05D008282 1.5e-19 99.4 78 65.4
MELO3C020691.2 Cucumis melo HOM05D006634 ORTHO05D008282 1.9e-19 99.0 86 57.0
FvH4_3g32290 Fragaria vesca HOM05D006634 ORTHO05D008282 1.9e-19 99.0 85 58.8
FAN11G2087 Fragaria x ananassa HOM05D006634 ORTHO05D008282 1.9e-19 99.0 85 58.8
THA.LOC104826362 Tarenaya hassleriana HOM05D006634 ORTHO05D008282 1.9e-19 99.0 85 63.5
Carub.0004s0938 Capsella rubella HOM05D006634 ORTHO05D008282 2.5e-19 98.6 85 62.4
AT2G28430 Arabidopsis thaliana HOM05D006634 ORTHO05D008282 4.3e-19 97.8 85 61.2
BcaB06g28214 Brassica carinata HOM05D006634 ORTHO05D008282 4.3e-19 97.8 81 64.2
Thhalv10017488m.g Eutrema salsugineum HOM05D006634 ORTHO05D008282 4.3e-19 97.8 86 61.6
Actinidia03728 Actinidia chinensis HOM05D006634 ORTHO05D008282 7.4e-19 97.1 84 61.9
Sabra04G0142400 Salix brachista HOM05D006634 ORTHO05D008282 7.4e-19 97.1 79 63.3
BolC4t23789H Brassica oleracea HOM05D006634 ORTHO05D008282 9.7e-19 96.7 85 60.0
BraA07t29605Z Brassica rapa HOM05D006634 ORTHO05D008282 9.7e-19 96.7 85 60.0
A07p19000 Brassica napus HOM05D006634 ORTHO05D008282 1.3e-18 96.3 85 60.0
FAN25G2760 Fragaria x ananassa HOM05D006634 ORTHO05D008282 1.3e-18 96.3 84 54.8
HanXRQChr02g0031651 Helianthus annuus HOM05D006634 ORTHO05D008282 1.3e-18 96.3 82 65.9
Sopen11g028130 Solanum pennellii HOM05D006634 ORTHO05D008282 1.6e-18 95.9 85 61.2
BcaNung07072 Brassica carinata HOM05D006634 ORTHO05D008282 2.2e-18 95.5 85 58.8
AUR62039638 Chenopodium quinoa HOM05D006634 ORTHO05D008282 2.2e-18 95.5 85 61.2
Solyc11g069410.2 Solanum lycopersicum HOM05D006634 ORTHO05D008282 2.8e-18 95.1 85 61.2
AUR62024980 Chenopodium quinoa HOM05D006634 ORTHO05D008282 3.7e-18 94.7 85 61.2
C04p22950 Brassica napus HOM05D006634 ORTHO05D008282 4.8e-18 94.4 86 58.1
ECA248G3376 Erigeron canadensis HOM05D006634 ORTHO05D008282 4.8e-18 94.4 82 61.0
Manes.04G021400 Manihot esculenta HOM05D006634 ORTHO05D008282 6.3e-18 94.0 83 61.4
Lsat_1_v5_gn_2_98520 Lactuca sativa HOM05D006634 ORTHO05D008282 8.2e-18 93.6 83 60.2
FAN16G1798 Fragaria x ananassa HOM05D006634 ORTHO05D008282 1.8e-17 92.4 78 57.7
Aqoxy2G01632 Aquilegia oxysepala HOM05D006634 ORTHO05D008282 5.3e-17 90.9 84 57.1
Peaxi162Scf00270g00818 Petunia axillaris HOM05D006634 ORTHO05D008282 6.9e-17 90.5 86 58.1
HanXRQChr14g0452861 Helianthus annuus HOM05D006634 ORTHO05D008282 1.5e-16 89.4 80 58.8
Cpa.g.sc216.10 Carica papaya HOM05D006634 ORTHO05D008282 7.7e-16 87.0 75 62.7
ECA238G2380 Erigeron canadensis HOM05D006634 ORTHO05D008282 7.7e-16 87.0 85 52.9
BolC4t27285H Brassica oleracea HOM05D006634 ORTHO05D008282 1.3e-15 86.3 79 57.0
Actinidia25419 Actinidia chinensis HOM05D006634 ORTHO05D008282 6.5e-15 84.0 73 60.3
BraA04t17721Z Brassica rapa HOM05D006634 ORTHO05D008282 2.5e-14 82.0 79 54.4
QL01p022236 Quercus lobata HOM05D006634 ORTHO05D008282 2.5e-14 82.0 174 33.3
Zm00001eb221580 Zea mays HOM05D006634 ORTHO05D008282 9.4e-14 80.1 83 54.2
Sed0015282 Sechium edule HOM05D006634 ORTHO05D008282 3.6e-13 78.2 79 51.9
Zm00001eb045570 Zea mays HOM05D006634 ORTHO05D008282 2.3e-12 75.5 83 51.8
Os10g0481400 Oryza sativa ssp. japonica HOM05D006634 ORTHO05D008282 8.8e-12 73.6 88 46.6
Cc01_g11130 Coffea canephora HOM05D006634 ORTHO05D008282 2.5e-11 72.0 65 52.3
SalBow3G3864 Salvia bowleyana HOM05D006634 ORTHO05D008282 1.7e-10 69.3 83 45.8
Mapoly0137s0028 Marchantia polymorpha HOM05D006634 ORTHO05D008282 3.1e-09 65.1 91 39.6
Pp3c7_7440 Physcomitrium patens HOM05D006634 ORTHO05D008282 1.5e-08 62.8 91 39.6
arahy.Tifrunner.gnm1.ann1.RL700P Arachis hypogaea HOM05D006503 ORTHO05D008116 1.0e-07 60.1 41 78.0
Haze_23828 Corylus avellana HOM05D006634 ORTHO05D008282 1.0e-07 60.1 48 66.7
MBI10_g13399_MAGBIO Magnolia biondii HOM05D006634 ORTHO05D008282 1.7e-07 59.3 43 67.4
Ah.01g002900 Amaranthus hybridus HOM05D006634 ORTHO05D008282 1.4e-06 56.2 70 45.7
A04p21560 Brassica napus HOM05D006634 ORTHO05D008282 1.9e-06 55.8 41 61.0
Haze_23826 Corylus avellana HOM05D025838 ORTHO05D008282 2.5e-06 55.5 31 74.2
PGSC0003DMG400008051 Solanum tuberosum HOM05D006634 ORTHO05D008282 4.2e-06 54.7 41 68.3
Lj1A192T37 Lonicera japonica HOM05D006634 ORTHO05D008282 7.2e-06 53.9 59 49.2


User provided reference genes

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