Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.12G064500 Glycine max HOM05D006284 ORTHO05D007793 1.7e-78 295.8 140 100.0
Phvul.011G065500 Phaseolus vulgaris HOM05D006284 ORTHO05D007793 8.0e-68 260.4 140 89.3
VMungo1127G1430 Vigna mungo HOM05D006284 ORTHO05D007793 8.9e-67 256.9 140 87.9
arahy.Tifrunner.gnm1.ann1.6H51DS Arachis hypogaea HOM05D006284 ORTHO05D007793 8.6e-62 240.4 139 80.6
Medtr4g063500 Medicago truncatula HOM05D006284 ORTHO05D007793 3.3e-61 238.4 139 80.6
Ca_19180_v3 Cicer arietinum L. HOM05D006284 ORTHO05D007793 1.6e-60 236.1 138 79.0
Ca_31183_v3 Cicer arietinum L. HOM05D006284 ORTHO05D007793 1.6e-60 236.1 138 79.0
arahy.Tifrunner.gnm1.ann1.W3SBYC Arachis hypogaea HOM05D006284 ORTHO05D007793 6.2e-60 234.2 139 79.1
Lj3g0026697 Lotus japonicus HOM05D006284 ORTHO05D007793 8.1e-60 233.8 135 83.0
QL01p032751 Quercus lobata HOM05D006284 ORTHO05D007793 1.1e-59 233.4 139 79.1
Lalb_Chr01g0003741 Lupinus albus HOM05D006284 ORTHO05D007793 3.1e-59 231.9 140 79.3
Psat7g217680 Pisum sativum HOM05D006284 ORTHO05D007793 3.1e-59 231.9 133 82.7
GSVIVG01025000001 Vitis vinifera HOM05D006284 ORTHO05D007793 5.2e-59 231.1 139 78.4
CiPaw.13G097000 Carya illinoinensis HOM05D006284 ORTHO05D007793 8.9e-59 230.3 139 78.4
Cpa.g.sc190.6 Carica papaya HOM05D006284 ORTHO05D007793 2.0e-58 229.2 139 77.7
Atru.chr3.3846 Acer truncatum HOM05D006284 ORTHO05D007793 4.4e-58 228.0 139 78.4
Haze_24061 Corylus avellana HOM05D006284 ORTHO05D007793 5.8e-58 227.6 139 77.0
Duzib168G1259 Durio zibethinus HOM05D006284 ORTHO05D007793 6.4e-57 224.2 140 75.7
Dinv03613 Davidia involucrata HOM05D006284 ORTHO05D007793 1.4e-56 223.0 139 77.0
Gorai.009G100800 Gossypium raimondii HOM05D006284 ORTHO05D007793 5.4e-56 221.1 140 75.7
Sed0023805 Sechium edule HOM05D006284 ORTHO05D007793 5.4e-56 221.1 140 73.6
DCAR_015613 Daucus carota HOM05D006284 ORTHO05D007793 7.1e-56 220.7 137 74.5
FAN11G1150 Fragaria x ananassa HOM05D006284 ORTHO05D007793 9.2e-56 220.3 139 75.5
FAN21G0749 Fragaria x ananassa HOM05D006284 ORTHO05D007793 9.2e-56 220.3 139 75.5
EL10Ac7g15985 Beta vulgaris HOM05D006284 ORTHO05D007793 1.2e-55 219.9 139 75.5
FAN16G2200 Fragaria x ananassa HOM05D006284 ORTHO05D007793 1.2e-55 219.9 139 75.5
MD11G1144900 Malus domestica HOM05D006284 ORTHO05D007793 1.2e-55 219.9 138 73.9
CANSAT54G2008 Cannabis sativa HOM05D006284 ORTHO05D007793 1.6e-55 219.5 140 74.3
Nitab4.5_0001304g0050 Nicotiana tabacum HOM05D006284 ORTHO05D007793 2.1e-55 219.2 137 74.5
Gohir.A05G097100 Gossypium hirsutum HOM05D006284 ORTHO05D007793 3.5e-55 218.4 140 74.3
Aa31sc281G30 Aethionema arabicum HOM05D006284 ORTHO05D007793 4.6e-55 218.0 140 75.0
Potri.001G237500 Populus trichocarpa HOM05D006284 ORTHO05D007793 4.6e-55 218.0 138 75.4
Prupe.6G080800 Prunus persica HOM05D006284 ORTHO05D007793 4.6e-55 218.0 131 77.1
Eucgr.B02382 Eucalyptus grandis HOM05D006284 ORTHO05D007793 6.0e-55 217.6 133 77.4
Rhsim01G0226200 Rhododendron simsii HOM05D006284 ORTHO05D007793 1.0e-54 216.9 139 75.5
RcHm_v2.0_Chr5g0063801 Rosa chinensis HOM05D006284 ORTHO05D007793 1.0e-54 216.9 139 74.8
Thecc.09G324900 Theobroma cacao HOM05D006284 ORTHO05D007793 1.0e-54 216.9 140 75.0
Nitab4.5_0001838g0030 Nicotiana tabacum HOM05D006284 ORTHO05D007793 1.7e-54 216.1 137 72.3
vmacro14530 Vaccinium macrocarpon HOM05D006284 ORTHO05D007793 2.3e-54 215.7 139 74.1
Thhalv10009069m.g Eutrema salsugineum HOM05D006284 ORTHO05D007793 3.9e-54 214.9 136 76.5
CsaV3_6G017010 Cucumis sativus L. HOM05D006284 ORTHO05D007793 8.6e-54 213.8 139 71.9
Sabra16G0143200 Salix brachista HOM05D006284 ORTHO05D007793 8.6e-54 213.8 138 74.6
Carub.0001s0699 Capsella rubella HOM05D006284 ORTHO05D007793 1.5e-53 213.0 136 75.0
ClCG02G020310 Citrullus lanatus HOM05D006284 ORTHO05D007793 1.5e-53 213.0 139 71.9
BcaC07g42493 Brassica carinata HOM05D006284 ORTHO05D007793 1.9e-53 212.6 136 75.7
COL.COLO4_18479 Corchorus olitorius HOM05D006284 ORTHO05D007793 2.5e-53 212.2 140 72.9
Gohir.D05G097250 Gossypium hirsutum HOM05D006284 ORTHO05D007793 4.3e-53 211.5 135 74.1
AL1G17850 Arabidopsis lyrata HOM05D006284 ORTHO05D007793 5.6e-53 211.1 136 75.0
Oeu056746.1 Olea europaea HOM05D006284 ORTHO05D007793 5.6e-53 211.1 139 72.7
PGR102G0171 Punica granatum HOM05D006284 ORTHO05D007793 5.6e-53 211.1 139 71.9
TAR623G0100 Trochodendron aralioides HOM05D006284 ORTHO05D007793 7.3e-53 210.7 136 74.3
BraA06t23686Z Brassica rapa HOM05D006284 ORTHO05D007793 9.5e-53 210.3 141 73.8
BcaC07g41981 Brassica carinata HOM05D006284 ORTHO05D007793 1.2e-52 209.9 136 75.7
BcaC07g42491 Brassica carinata HOM05D006284 ORTHO05D007793 1.2e-52 209.9 136 75.7
C08p50410 Brassica napus HOM05D006284 ORTHO05D007793 1.2e-52 209.9 136 75.7
BolC8t52569H Brassica oleracea HOM05D006284 ORTHO05D007793 1.2e-52 209.9 136 75.7
Aqoxy4G02964 Aquilegia oxysepala HOM05D006284 ORTHO05D007793 1.6e-52 209.5 138 70.3
A06p04820 Brassica napus HOM05D006284 ORTHO05D007793 1.6e-52 209.5 137 75.2
Peaxi162Scf00679g00212 Petunia axillaris HOM05D006284 ORTHO05D007793 1.6e-52 209.5 136 72.8
C05p05670 Brassica napus HOM05D006284 ORTHO05D007793 2.1e-52 209.1 137 75.2
BolC5t29337H Brassica oleracea HOM05D006284 ORTHO05D007793 2.1e-52 209.1 137 75.2
CARHR007450 Cardamine hirsuta HOM05D006284 ORTHO05D007793 2.1e-52 209.1 130 76.2
AT1G07645 Arabidopsis thaliana HOM05D006284 ORTHO05D007793 2.8e-52 208.8 136 74.3
CAN.G394.47 Capsicum annuum HOM05D006284 ORTHO05D007793 2.8e-52 208.8 135 72.6
AUR62009602 Chenopodium quinoa HOM05D006284 ORTHO05D007793 3.6e-52 208.4 139 71.2
Oeu041449.2 Olea europaea HOM05D006284 ORTHO05D007793 3.6e-52 208.4 139 72.7
Sc06g0008270 Simmondsia chinensis HOM05D006284 ORTHO05D007793 3.6e-52 208.4 134 70.9
Sopen06g032410 Solanum pennellii HOM05D006284 ORTHO05D007793 3.6e-52 208.4 135 71.1
PGSC0003DMG400030315 Solanum tuberosum HOM05D006284 ORTHO05D007793 3.6e-52 208.4 135 72.6
Migut.L00518 Erythranthe guttata HOM05D006284 ORTHO05D007793 4.7e-52 208.0 135 76.3
Solyc06g075990.4 Solanum lycopersicum HOM05D006284 ORTHO05D007793 6.2e-52 207.6 134 70.9
A09p66230 Brassica napus HOM05D006284 ORTHO05D007793 8.1e-52 207.2 136 75.0
Hma1.2p1_1897F.1_g306861 Hydrangea macrophylla HOM05D006284 ORTHO05D007793 8.1e-52 207.2 129 76.7
MELO3C013690.2 Cucumis melo HOM05D006284 ORTHO05D007793 1.4e-51 206.5 139 69.1
Sp1g06380 Schrenkiella parvula HOM05D006284 ORTHO05D007793 1.4e-51 206.5 136 73.5
Actinidia33860 Actinidia chinensis HOM05D006284 ORTHO05D007793 1.8e-51 206.1 139 71.9
ECA247G3393 Erigeron canadensis HOM05D006284 ORTHO05D007793 2.3e-51 205.7 137 72.3
THA.LOC104800652 Tarenaya hassleriana HOM05D006284 ORTHO05D007793 2.3e-51 205.7 140 69.3
BraA09t41961Z Brassica rapa HOM05D006284 ORTHO05D007793 3.1e-51 205.3 136 74.3
MSTRG.15272 Avicennia marina HOM05D006284 ORTHO05D007793 4.0e-51 204.9 135 74.8
HanXRQChr15g0493271 Helianthus annuus HOM05D006284 ORTHO05D007793 4.0e-51 204.9 135 72.6
Manes.11G132300 Manihot esculenta HOM05D006284 ORTHO05D007793 5.2e-51 204.5 139 71.2
AUR62001816 Chenopodium quinoa HOM05D006284 ORTHO05D007793 2.6e-50 202.2 133 72.9
SalBow5G5166 Salvia bowleyana HOM05D006284 ORTHO05D007793 2.6e-50 202.2 135 72.6
BcaC07g42490 Brassica carinata HOM05D006284 ORTHO05D007793 4.4e-50 201.4 137 74.5
Lsat_1_v5_gn_5_183840 Lactuca sativa HOM05D006284 ORTHO05D007793 7.6e-50 200.7 135 71.9
Lsat_1_v5_gn_9_22581 Lactuca sativa HOM05D006284 ORTHO05D007793 1.7e-49 199.5 135 71.9
PSO339G4936 Papaver somniferum HOM05D006284 ORTHO05D007793 2.9e-49 198.7 135 70.4
Os03g0277500 Oryza sativa ssp. japonica HOM05D006284 ORTHO05D007793 1.1e-48 196.8 129 70.5
Migut.L00567 Erythranthe guttata HOM05D006284 ORTHO05D007793 3.2e-48 195.3 128 75.0
PSO384G0339 Papaver somniferum HOM05D006284 ORTHO05D007793 1.2e-47 193.4 135 68.9
TWI79G0071 Tripterygium wilfordii HOM05D006284 ORTHO05D007793 1.6e-44 183.0 139 66.9
Gohir.A07G096400 Gossypium hirsutum HOM05D006284 ORTHO05D007793 2.8e-44 182.2 161 60.9
SGA_v2.0_scaffold606G53170 Striga asiatica HOM05D006284 ORTHO05D007793 2.8e-44 182.2 130 69.2
SHI00991 Sapria himalayana HOM05D006284 ORTHO05D007793 8.1e-44 180.6 139 63.3
Zm00001eb012550 Zea mays HOM05D006284 ORTHO05D007793 6.9e-43 177.6 131 63.4
Gorai.001G108700 Gossypium raimondii HOM05D006284 ORTHO05D007793 1.2e-39 166.8 131 67.2
MBI14_g11686_MAGBIO Magnolia biondii HOM05D006284 ORTHO05D007793 1.2e-39 166.8 96 79.2
Ciclev10029580m.g Citrus clementina HOM05D006284 ORTHO05D007793 2.1e-39 166.0 114 71.1
Gohir.D07G100800 Gossypium hirsutum HOM05D006284 ORTHO05D007793 3.5e-39 165.2 157 59.2
SMO165G0091 Selaginella moellendorffii HOM05D006284 ORTHO05D007793 5.1e-38 161.4 132 56.1
TPR.G10205 Trifolium pratense HOM05D006284 ORTHO05D007793 2.1e-36 156.0 91 81.3
FvH4_3g35580 Fragaria vesca HOM05D006284 ORTHO05D007793 8.1e-36 154.1 139 60.4
Lj2A1058T40 Lonicera japonica HOM05D006284 ORTHO05D007793 2.4e-35 152.5 94 75.5
DCAR_018897 Daucus carota HOM05D006284 ORTHO05D007793 9.0e-35 150.6 98 72.4
Mapoly0004s0146 Marchantia polymorpha HOM05D006284 ORTHO05D007793 1.5e-34 149.8 125 59.2
CSS0000036 Camellia sinensis var. sinensis HOM05D006284 ORTHO05D007793 2.4e-32 142.5 139 55.4
Oeu033642.1 Olea europaea HOM05D006284 ORTHO05D007793 2.4e-32 142.5 101 68.3
Oeu056758.1 Olea europaea HOM05D006284 ORTHO05D007793 9.3e-32 140.6 96 69.8
Oeu056743.1 Olea europaea HOM05D006284 ORTHO05D007793 1.6e-31 139.8 97 69.1
FAN11G3292 Fragaria x ananassa HOM05D006284 ORTHO05D007793 1.8e-30 136.3 139 55.4
Oeu056739.1 Olea europaea HOM05D006284 ORTHO05D007793 5.6e-29 131.3 136 53.7
Peaxi162Scf00406g00314 Petunia axillaris HOM05D006284 ORTHO05D007793 5.1e-22 108.2 140 46.4
AagrBONN_evm.TU.Sc2ySwM_117.384 Anthoceros agrestis HOM05D006284 ORTHO05D007793 1.4e-19 100.1 130 43.1
SEGI_15500 Sequoiadendron giganteum HOM05D006284 ORTHO05D007793 1.8e-19 99.8 96 53.1
AagrBONN_evm.TU.Sc2ySwM_344.4820 Anthoceros agrestis HOM05D006284 ORTHO05D007793 3.1e-19 99.0 95 50.5
Pp3c19_1590 Physcomitrium patens HOM05D006284 ORTHO05D007793 7.6e-18 94.4 127 40.2
AagrBONN_evm.TU.Sc2ySwM_344.4822 Anthoceros agrestis HOM05D018382 ORTHO05D001873 1.1e-16 90.5 117 41.0
FvH4_3g35610 Fragaria vesca HOM05D006284 ORTHO05D007793 1.9e-16 89.7 139 40.3
MD07G1053700 Malus domestica HOM05D006284 ORTHO05D007793 5.5e-16 88.2 62 62.9
MD14G1025700 Malus domestica HOM05D006284 ORTHO05D007793 7.9e-15 84.3 62 59.7
CANSAT21G1079 Cannabis sativa HOM05D002411 ORTHO05D002564 1.0e-14 84.0 60 65.0
TPR.G10968 Trifolium pratense HOM05D006284 ORTHO05D007793 5.1e-14 81.6 42 88.1
Cc01_g12610 Coffea canephora HOM05D006284 ORTHO05D007793 7.6e-10 67.8 42 71.4
Cc01_g12620 Coffea canephora HOM05D006284 ORTHO05D007793 5.5e-08 61.6 33 84.8
Pp3c13_5750 Physcomitrium patens HOM05D004226 ORTHO05D004842 1.2e-07 60.5 143 31.5
ATR0559G308 Amborella trichopoda HOM05D006284 ORTHO05D007793 4.6e-07 58.5 36 75.0


User provided reference genes

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