Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.11G114900 Glycine max HOM05D000697 ORTHO05D010185 2.1e-16 87.8 42 100.0
Glyma.12G040700 Glycine max HOM05D000697 ORTHO05D010185 2.1e-16 87.8 42 100.0
Phvul.009G005900 Phaseolus vulgaris HOM05D000697 ORTHO05D010185 2.1e-16 87.8 42 100.0
Glyma.04G010400 Glycine max HOM05D000697 ORTHO05D010185 1.8e-15 84.7 42 97.6
Phvul.011G042700 Phaseolus vulgaris HOM05D000697 ORTHO05D010185 3.1e-15 84.0 42 95.2
Glyma.06G010300 Glycine max HOM05D000697 ORTHO05D010185 5.3e-15 83.2 43 97.7
Potri.009G119650 Populus trichocarpa HOM05D000697 ORTHO05D010185 1.3e-13 78.6 42 90.5
Potri.004G158150 Populus trichocarpa HOM05D000697 ORTHO05D010185 2.9e-13 77.4 42 88.1
CiPaw.05G068000 Carya illinoinensis HOM05D000697 ORTHO05D010185 8.4e-13 75.9 42 85.7
Lalb_Chr08g0246681 Lupinus albus HOM05D000697 ORTHO05D000169 1.1e-12 75.5 40 92.5
Manes.04G074110 Manihot esculenta HOM05D000697 ORTHO05D010185 2.5e-12 74.3 42 88.1
Manes.11G084900 Manihot esculenta HOM05D000697 ORTHO05D010185 4.2e-12 73.6 42 85.7
CiPaw.06G133300 Carya illinoinensis HOM05D000697 ORTHO05D010185 2.1e-11 71.2 42 83.3
Thecc.02G081000 Theobroma cacao HOM05D000697 ORTHO05D010185 2.1e-11 71.2 42 85.7
Carub.0007s0570 Capsella rubella HOM05D000697 ORTHO05D010185 2.7e-11 70.9 39 87.2
Lalb_Chr23g0265321 Lupinus albus HOM05D000697 ORTHO05D010185 2.7e-11 70.9 43 81.4
Gohir.D02G217700 Gossypium hirsutum HOM05D000697 ORTHO05D010185 3.5e-11 70.5 42 85.7
Prupe.8G091700 Prunus persica HOM05D000697 ORTHO05D010185 3.5e-11 70.5 42 81.0
CAN.G1544.1 Capsicum annuum HOM05D000697 ORTHO05D010185 3.9e-10 67.0 42 76.2
MD05G1062200 Malus domestica HOM05D000697 ORTHO05D000169 3.9e-10 67.0 39 79.5
FAN20G0406 Fragaria x ananassa HOM05D000697 ORTHO05D000169 5.1e-10 66.6 39 79.5
FAN24G3114 Fragaria x ananassa HOM05D000697 ORTHO05D000169 5.1e-10 66.6 39 79.5
FAN27G3145 Fragaria x ananassa HOM05D000697 ORTHO05D000169 5.1e-10 66.6 39 79.5
Gohir.A12G062300 Gossypium hirsutum HOM05D000697 ORTHO05D010185 8.7e-10 65.9 42 76.2
Thecc.01G028200 Theobroma cacao HOM05D000697 ORTHO05D010185 8.7e-10 65.9 42 76.2
FAN19G2851 Fragaria x ananassa HOM05D000697 ORTHO05D000169 1.1e-09 65.5 40 75.0
FAN26G2107 Fragaria x ananassa HOM05D000697 ORTHO05D000169 1.1e-09 65.5 40 75.0
FAN28G2503 Fragaria x ananassa HOM05D000697 ORTHO05D000169 1.1e-09 65.5 40 75.0
Gohir.A04G124500 Gossypium hirsutum HOM05D000697 ORTHO05D000169 1.1e-09 65.5 36 86.1
Gohir.D04G166600 Gossypium hirsutum HOM05D000697 ORTHO05D000169 1.1e-09 65.5 36 86.1
Gorai.012G155000 Gossypium raimondii HOM05D000697 ORTHO05D000169 1.1e-09 65.5 36 86.1
Prupe.7G160500 Prunus persica HOM05D000697 ORTHO05D010185 1.1e-09 65.5 42 73.8
Gohir.D11G188600 Gossypium hirsutum HOM05D000697 ORTHO05D010185 1.5e-09 65.1 42 73.8
CiPaw.08G138600 Carya illinoinensis HOM05D000697 ORTHO05D010185 1.9e-09 64.7 42 73.8
Gorai.007G200600 Gossypium raimondii HOM05D000697 ORTHO05D000169 3.3e-09 63.9 38 76.3
Manes.02G097800 Manihot esculenta HOM05D000697 ORTHO05D010185 3.3e-09 63.9 42 73.8
CiPaw.07G050800 Carya illinoinensis HOM05D000697 ORTHO05D010185 5.6e-09 63.2 42 71.4
CiPaw.07G157300 Carya illinoinensis HOM05D000697 ORTHO05D010185 5.6e-09 63.2 42 73.8
CiPaw.08G060300 Carya illinoinensis HOM05D000697 ORTHO05D010185 5.6e-09 63.2 42 73.8
FAN15G1563 Fragaria x ananassa HOM05D000697 ORTHO05D000169 5.6e-09 63.2 35 82.9
Glyma.14G071500 Glycine max HOM05D000697 ORTHO05D010185 5.6e-09 63.2 42 73.8
Glyma.17G253132 Glycine max HOM05D000697 ORTHO05D010185 5.6e-09 63.2 42 73.8
Gohir.A11G181800 Gossypium hirsutum HOM05D000697 ORTHO05D000169 5.6e-09 63.2 38 76.3
Lalb_Chr14g0369491 Lupinus albus HOM05D000697 ORTHO05D010185 5.6e-09 63.2 42 73.8
MBI10_g00750_MAGBIO Magnolia biondii HOM05D000697 ORTHO05D000169 5.6e-09 63.2 40 75.0
Manes.05G155332 Manihot esculenta HOM05D000697 ORTHO05D010185 5.6e-09 63.2 42 73.8
Manes.18G021001 Manihot esculenta HOM05D000697 ORTHO05D010185 5.6e-09 63.2 42 73.8
Phvul.001G011900 Phaseolus vulgaris HOM05D000697 ORTHO05D010185 5.6e-09 63.2 42 73.8
Cc10_g02470 Coffea canephora HOM05D000697 ORTHO05D010185 9.6e-09 62.4 42 71.4
arahy.Tifrunner.gnm1.ann1.T95EUW Arachis hypogaea HOM05D000697 ORTHO05D010185 1.3e-08 62.0 38 76.3
Migut.N00473 Erythranthe guttata HOM05D000697 ORTHO05D010185 1.3e-08 62.0 42 71.4
Gohir.A06G007100 Gossypium hirsutum HOM05D000697 ORTHO05D010185 1.3e-08 62.0 42 71.4
Gohir.D05G194400 Gossypium hirsutum HOM05D000697 ORTHO05D010185 1.3e-08 62.0 42 71.4
Potri.002G032000 Populus trichocarpa HOM05D000697 ORTHO05D010185 1.3e-08 62.0 42 71.4
Thecc.08G033000 Theobroma cacao HOM05D000697 ORTHO05D010185 1.3e-08 62.0 42 71.4
MD02G1140600 Malus domestica HOM05D000697 ORTHO05D000169 1.6e-08 61.6 35 80.0
Migut.C00767 Erythranthe guttata HOM05D000697 ORTHO05D010185 2.1e-08 61.2 42 71.4
Potri.005G231250 Populus trichocarpa HOM05D000697 ORTHO05D010185 2.8e-08 60.8 41 70.7
Prupe.1G374500 Prunus persica HOM05D000697 ORTHO05D010185 2.8e-08 60.8 42 69.0
Gohir.D02G095800 Gossypium hirsutum HOM05D000697 ORTHO05D010185 3.7e-08 60.5 41 68.3
vmacro04298 Vaccinium macrocarpon HOM05D000697 ORTHO05D010185 4.8e-08 60.1 38 73.7
CAN.G358.36 Capsicum annuum HOM05D000697 ORTHO05D010185 6.2e-08 59.7 42 66.7
FAN27G0060 Fragaria x ananassa HOM05D000697 ORTHO05D010185 6.2e-08 59.7 38 71.1
Migut.B00215 Erythranthe guttata HOM05D000697 ORTHO05D010185 8.2e-08 59.3 35 74.3
BolC3t18161H Brassica oleracea HOM05D000697 ORTHO05D010185 1.1e-07 58.9 42 66.7
BraA06t26266Z Brassica rapa HOM05D000697 ORTHO05D010185 1.1e-07 58.9 42 66.7
Carub.0003s3231 Capsella rubella HOM05D000697 ORTHO05D010185 1.1e-07 58.9 42 66.7
Gohir.D01G102800 Gossypium hirsutum HOM05D000697 ORTHO05D010185 1.1e-07 58.9 38 71.1
Potri.007G020000 Populus trichocarpa HOM05D000697 ORTHO05D010185 1.1e-07 58.9 42 69.0
Carub.0002s2224 Capsella rubella HOM05D000697 ORTHO05D010185 1.4e-07 58.5 42 66.7
CARHR068750 Cardamine hirsuta HOM05D000697 ORTHO05D010185 1.4e-07 58.5 42 66.7
Aa31LG8G15820 Aethionema arabicum HOM05D000697 ORTHO05D010185 1.8e-07 58.2 38 68.4
Dinv40025 Davidia involucrata HOM05D003765 ORTHO05D000169 1.8e-07 58.2 35 74.3
Glyma.05G157100 Glycine max HOM05D000697 ORTHO05D010185 1.8e-07 58.2 40 67.5
Glyma.08G115251 Glycine max HOM05D000697 ORTHO05D010185 1.8e-07 58.2 40 67.5
Gohir.D12G062100 Gossypium hirsutum HOM05D000697 ORTHO05D000169 1.8e-07 58.2 35 80.0
Gorai.008G065300 Gossypium raimondii HOM05D000697 ORTHO05D000169 1.8e-07 58.2 35 80.0
Phvul.002G237700 Phaseolus vulgaris HOM05D000697 ORTHO05D010185 1.8e-07 58.2 40 67.5
CAN.G1373.26 Capsicum annuum HOM05D000697 ORTHO05D010185 2.4e-07 57.8 36 72.2
CAN.G568.4 Capsicum annuum HOM05D000697 ORTHO05D010185 2.4e-07 57.8 42 66.7
ClCG01G019930 Citrullus lanatus HOM05D000697 ORTHO05D010185 3.1e-07 57.4 38 71.1
ClCG05G018700 Citrullus lanatus HOM05D000697 ORTHO05D010185 3.1e-07 57.4 40 67.5
FAN15G1852 Fragaria x ananassa HOM05D000697 ORTHO05D000169 3.1e-07 57.4 38 68.4
FAN26G2173 Fragaria x ananassa HOM05D000697 ORTHO05D010185 3.1e-07 57.4 38 68.4
Eucgr.I02397 Eucalyptus grandis HOM05D000697 ORTHO05D010185 4.0e-07 57.0 40 67.5
Gohir.A03G196600 Gossypium hirsutum HOM05D000697 ORTHO05D000169 6.9e-07 56.2 35 82.9
Gorai.005G245700 Gossypium raimondii HOM05D000697 ORTHO05D000169 6.9e-07 56.2 35 82.9
MD15G1253800 Malus domestica HOM05D000697 ORTHO05D000169 6.9e-07 56.2 35 74.3
BolC9t54271H Brassica oleracea HOM05D000697 ORTHO05D010185 9.0e-07 55.8 42 64.3
BraA07t28050Z Brassica rapa HOM05D000697 ORTHO05D010185 9.0e-07 55.8 42 64.3
BraA09t36820Z Brassica rapa HOM05D000697 ORTHO05D010185 9.0e-07 55.8 42 64.3
Potri.005G119400 Populus trichocarpa HOM05D000697 ORTHO05D010185 9.0e-07 55.8 43 69.8
Gohir.A05G190900 Gossypium hirsutum HOM05D000697 ORTHO05D000169 2.6e-06 54.3 35 74.3
Gohir.D06G003300 Gossypium hirsutum HOM05D000697 ORTHO05D000169 2.6e-06 54.3 35 74.3
Gorai.009G199300 Gossypium raimondii HOM05D000697 ORTHO05D000169 2.6e-06 54.3 35 74.3
Gorai.010G008000 Gossypium raimondii HOM05D000697 ORTHO05D000169 2.6e-06 54.3 35 74.3
Lj4g0025152 Lotus japonicus HOM05D000697 ORTHO05D000169 2.6e-06 54.3 35 68.6
Lalb_Chr23g0266511 Lupinus albus HOM05D000697 ORTHO05D010185 4.5e-06 53.5 41 63.4
Lalb_Chr11g0062211 Lupinus albus HOM05D000697 ORTHO05D010185 5.8e-06 53.1 38 65.8
MD08G1025800 Malus domestica HOM05D000697 ORTHO05D000169 5.8e-06 53.1 35 71.4
MD15G1022500 Malus domestica HOM05D000697 ORTHO05D000169 5.8e-06 53.1 35 71.4
Sed0018930 Sechium edule HOM05D000697 ORTHO05D000169 5.8e-06 53.1 33 72.7
EL10Ac3g05169 Beta vulgaris HOM05D000697 ORTHO05D000169 7.6e-06 52.8 32 78.1
Gorai.005G109600 Gossypium raimondii HOM05D000697 ORTHO05D000169 7.6e-06 52.8 35 71.4
Gohir.A01G114100 Gossypium hirsutum HOM05D000697 ORTHO05D000169 1.0e-05 52.4 35 71.4
Gorai.002G126500 Gossypium raimondii HOM05D000697 ORTHO05D000169 1.0e-05 52.4 35 71.4
SGA_v2.0_scaffold11G05844 Striga asiatica HOM05D000697 ORTHO05D010185 1.0e-05 52.4 41 63.4


User provided reference genes

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