Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.12G029100 Glycine max HOM05D007059 ORTHO05D009155 3.9e-122 441.4 215 100.0
Glyma.11G104100 Glycine max HOM05D007059 ORTHO05D009155 7.6e-118 427.2 215 95.8
VMungo1127G1389 Vigna mungo HOM05D007059 ORTHO05D009155 2.6e-110 402.1 215 89.3
Phvul.011G032300 Phaseolus vulgaris HOM05D007059 ORTHO05D009155 1.0e-109 400.2 215 90.2
Lalb_Chr01g0001591 Lupinus albus HOM05D007059 ORTHO05D009155 9.7e-97 357.1 225 78.7
TPR.G21564 Trifolium pratense HOM05D007059 ORTHO05D009155 1.1e-95 353.6 223 79.4
Ca_03042_v3 Cicer arietinum L. HOM05D007059 ORTHO05D009155 1.4e-95 353.2 222 80.2
Lj3g0001367 Lotus japonicus HOM05D007059 ORTHO05D009155 1.0e-93 347.1 224 77.7
Medtr4g074210 Medicago truncatula HOM05D007059 ORTHO05D009155 1.7e-93 346.3 226 77.4
Psat7g174240 Pisum sativum HOM05D007059 ORTHO05D009155 1.9e-92 342.8 223 78.9
arahy.Tifrunner.gnm1.ann1.NRJ0Q8 Arachis hypogaea HOM05D007059 ORTHO05D009155 1.1e-87 327.0 213 77.5
arahy.Tifrunner.gnm1.ann1.PC0HA4 Arachis hypogaea HOM05D007059 ORTHO05D009155 1.1e-87 327.0 213 77.5
GSVIVG01010187001 Vitis vinifera HOM05D007059 ORTHO05D009155 2.3e-82 309.3 224 70.1
Thecc.02G295400 Theobroma cacao HOM05D007059 ORTHO05D009155 6.1e-75 284.6 234 63.2
CiPaw.05G167400 Carya illinoinensis HOM05D007059 ORTHO05D009155 4.0e-74 282.0 228 63.2
RcHm_v2.0_Chr4g0446371 Rosa chinensis HOM05D007059 ORTHO05D009155 6.8e-74 281.2 222 64.4
Ciclev10033522m.g Citrus clementina HOM05D007059 ORTHO05D009155 2.6e-73 279.3 220 66.8
Prupe.1G344600 Prunus persica HOM05D007059 ORTHO05D009155 2.6e-73 279.3 226 64.6
FvH4_4g36660 Fragaria vesca HOM05D007059 ORTHO05D009155 3.4e-73 278.9 222 63.5
FAN12G0665 Fragaria x ananassa HOM05D007059 ORTHO05D009155 3.4e-73 278.9 222 63.5
CSS0038027 Camellia sinensis var. sinensis HOM05D007059 ORTHO05D009155 4.4e-73 278.5 225 62.7
FAN07G2854 Fragaria x ananassa HOM05D007059 ORTHO05D009155 5.7e-73 278.1 222 64.0
vmacro08590 Vaccinium macrocarpon HOM05D007059 ORTHO05D009155 5.7e-73 278.1 220 64.1
Atru.chr11.1222 Acer truncatum HOM05D007059 ORTHO05D009155 1.3e-72 276.9 226 65.0
COL.COLO4_16620 Corchorus olitorius HOM05D007059 ORTHO05D009155 4.8e-72 275.0 227 63.4
Rhsim04G0168700 Rhododendron simsii HOM05D007059 ORTHO05D009155 8.3e-72 274.2 220 63.6
Potri.010G169700 Populus trichocarpa HOM05D007059 ORTHO05D009155 1.1e-71 273.9 240 62.1
Sabra10G0129500 Salix brachista HOM05D007059 ORTHO05D009155 1.1e-71 273.9 240 61.7
Cfa008725 Carpinus fangiana HOM05D004663 ORTHO05D006325 2.4e-71 272.7 227 62.6
TAR629G1440 Trochodendron aralioides HOM05D007059 ORTHO05D009155 3.1e-71 272.3 226 62.8
Manes.16G044801 Manihot esculenta HOM05D007059 ORTHO05D009155 7.0e-71 271.2 220 64.1
Nn4g24915 Nelumbo nucifera HOM05D007059 ORTHO05D009155 7.0e-71 271.2 226 63.7
MD16G1006000 Malus domestica HOM05D007059 ORTHO05D009155 2.0e-70 269.6 227 63.4
Actinidia38411 Actinidia chinensis HOM05D007059 ORTHO05D009155 2.2e-69 266.2 225 61.3
Peaxi162Scf01172g00004 Petunia axillaris HOM05D007059 ORTHO05D009155 6.5e-69 264.6 169 75.1
Lj3A851T65 Lonicera japonica HOM05D007059 ORTHO05D009155 1.5e-68 263.5 232 60.8
Eucgr.G02016 Eucalyptus grandis HOM05D007059 ORTHO05D009155 4.2e-68 261.9 224 60.7
PSO782G1004 Papaver somniferum HOM05D007059 ORTHO05D009155 4.2e-68 261.9 231 60.2
CAN.G624.23 Capsicum annuum HOM05D007059 ORTHO05D009155 1.6e-67 260.0 168 75.0
PGSC0003DMG400032539 Solanum tuberosum HOM05D007059 ORTHO05D009155 1.6e-67 260.0 168 75.6
PSO063G1277 Papaver somniferum HOM05D007059 ORTHO05D009155 2.1e-67 259.6 231 59.7
Nitab4.5_0002113g0150 Nicotiana tabacum HOM05D007059 ORTHO05D009155 2.7e-67 259.2 187 69.5
Nitab4.5_0007261g0020 Nicotiana tabacum HOM05D007059 ORTHO05D009155 2.7e-67 259.2 168 74.4
Sopen04g004490 Solanum pennellii HOM05D007059 ORTHO05D009155 2.7e-67 259.2 168 75.6
MELO3C020030.2 Cucumis melo HOM05D007059 ORTHO05D009155 6.1e-67 258.1 217 62.7
Solyc04g009370.4 Solanum lycopersicum HOM05D007059 ORTHO05D009155 1.4e-66 256.9 168 75.0
Sc10g0008670 Simmondsia chinensis HOM05D007059 ORTHO05D009155 3.0e-66 255.8 195 69.7
ClCG11G001160 Citrullus lanatus HOM05D007059 ORTHO05D009155 4.0e-66 255.4 226 60.2
MBI06_g22349_MAGBIO Magnolia biondii HOM05D007059 ORTHO05D009155 4.0e-66 255.4 168 76.8
Gohir.A01G145900 Gossypium hirsutum HOM05D007059 ORTHO05D009155 8.8e-66 254.2 233 58.4
Aqoxy3G04246 Aquilegia oxysepala HOM05D007059 ORTHO05D009155 1.2e-65 253.8 221 61.1
Sed0015909 Sechium edule HOM05D007059 ORTHO05D009155 2.0e-65 253.1 220 60.0
Gorai.002G167400 Gossypium raimondii HOM05D007059 ORTHO05D009155 1.3e-64 250.4 229 59.0
Gohir.D01G138500 Gossypium hirsutum HOM05D007059 ORTHO05D009155 3.7e-64 248.8 229 59.0
Cc11_g00200 Coffea canephora HOM05D007059 ORTHO05D009155 3.1e-63 245.7 225 60.4
AUR62017646 Chenopodium quinoa HOM05D007059 ORTHO05D009155 7.0e-63 244.6 175 72.6
Migut.E00704 Erythranthe guttata HOM05D007059 ORTHO05D009155 1.6e-62 243.4 218 60.6
ECA234G4546 Erigeron canadensis HOM05D007059 ORTHO05D009155 3.5e-62 242.3 159 75.5
unitig_27.g25281 Utricularia gibba HOM05D007059 ORTHO05D009155 3.5e-62 242.3 168 74.4
MSTRG.2053 Avicennia marina HOM05D007059 ORTHO05D009155 4.5e-62 241.9 131 87.8
AUR62012864 Chenopodium quinoa HOM05D007059 ORTHO05D009155 4.5e-62 241.9 169 72.2
CANSAT35G1437 Cannabis sativa HOM05D007059 ORTHO05D009155 7.7e-62 241.1 143 83.2
HanXRQChr01g0028541 Helianthus annuus HOM05D007059 ORTHO05D009155 1.3e-61 240.4 131 86.3
Lsat_1_v5_gn_4_26421 Lactuca sativa HOM05D007059 ORTHO05D009155 2.3e-61 239.6 225 56.9
Cpa.g.sc298.2 Carica papaya HOM05D007059 ORTHO05D009155 3.8e-61 238.8 213 60.1
BcaC09g48947 Brassica carinata HOM05D007059 ORTHO05D009155 5.0e-61 238.4 221 57.9
C01p44250 Brassica napus HOM05D007059 ORTHO05D009155 5.0e-61 238.4 221 57.9
BolC1t04385H Brassica oleracea HOM05D007059 ORTHO05D009155 5.0e-61 238.4 221 57.9
EL10Ac9g22903 Beta vulgaris HOM05D007059 ORTHO05D009155 1.1e-60 237.3 161 74.5
AL3G33460 Arabidopsis lyrata HOM05D007059 ORTHO05D009155 1.9e-60 236.5 224 58.5
ATR0124G031 Amborella trichopoda HOM05D007059 ORTHO05D009155 2.5e-60 236.1 140 80.0
Sp3g17910 Schrenkiella parvula HOM05D007059 ORTHO05D009155 3.3e-60 235.7 223 57.4
CARHR095430 Cardamine hirsuta HOM05D007059 ORTHO05D009155 4.3e-60 235.3 223 57.8
Duzib251G0490 Durio zibethinus HOM05D007059 ORTHO05D009155 7.3e-60 234.6 228 57.5
Haze_11738 Corylus avellana HOM05D007059 ORTHO05D009155 1.2e-59 233.8 206 59.7
Carub.0003s1980 Capsella rubella HOM05D007059 ORTHO05D009155 2.1e-59 233.0 170 69.4
Thhalv10021482m.g Eutrema salsugineum HOM05D007059 ORTHO05D009155 2.8e-59 232.6 223 57.4
HPP92_002491 Vanilla planifolia HOM05D007059 ORTHO05D009155 2.0e-57 226.5 149 75.2
HPP92_002544 Vanilla planifolia HOM05D007059 ORTHO05D009155 2.0e-57 226.5 149 75.2
A01p34850 Brassica napus HOM05D007059 ORTHO05D009155 4.4e-57 225.3 170 68.2
BraA01t03568Z Brassica rapa HOM05D007059 ORTHO05D009155 4.4e-57 225.3 170 68.2
Aa31LG8G6740 Aethionema arabicum HOM05D007059 ORTHO05D009155 5.7e-57 224.9 128 82.8
TWI77G0260 Tripterygium wilfordii HOM05D007059 ORTHO05D009155 1.7e-56 223.4 200 61.5
Oeu027905.1 Olea europaea HOM05D007059 ORTHO05D009155 3.2e-55 219.2 149 74.5
Zm00001eb259420 Zea mays HOM05D007059 ORTHO05D009155 2.7e-54 216.1 126 81.0
Migut.E00613 Erythranthe guttata HOM05D007059 ORTHO05D009155 8.6e-53 211.1 208 56.7
Hund08500 Selenicereus undatus HOM05D007059 ORTHO05D009155 1.9e-52 209.9 153 69.9
Pp3c10_16080 Physcomitrium patens HOM05D007059 ORTHO05D009155 2.5e-52 209.5 187 57.8
THA.LOC104801903 Tarenaya hassleriana HOM05D007059 ORTHO05D009155 5.6e-52 208.4 205 56.1
SGA_v2.0_scaffold88G27235 Striga asiatica HOM05D007059 ORTHO05D009155 7.3e-52 208.0 114 87.7
Pp3c2_14430 Physcomitrium patens HOM05D007059 ORTHO05D009155 1.2e-51 207.2 166 60.2
SMO114G0039 Selaginella moellendorffii HOM05D007059 ORTHO05D009155 2.3e-50 203.0 125 77.6
AagrBONN_evm.TU.Sc2ySwM_344.1288 Anthoceros agrestis HOM05D007059 ORTHO05D009155 3.1e-50 202.6 150 65.3
DCAR_023442 Daucus carota HOM05D007059 ORTHO05D008600 2.2e-48 196.4 111 83.8
Mapoly0055s0010 Marchantia polymorpha HOM05D007059 ORTHO05D009155 5.4e-47 191.8 159 59.7
Actinidia13703 Actinidia chinensis HOM05D007059 ORTHO05D009155 4.7e-43 178.7 167 58.1
Dinv01917 Davidia involucrata HOM05D007059 ORTHO05D009155 5.2e-42 175.3 223 46.6
PGR031G0357 Punica granatum HOM05D007059 ORTHO05D009155 3.2e-39 166.0 227 45.8
CDE04G0067 Ceratophyllum demersum HOM05D007059 ORTHO05D009155 6.6e-37 158.3 133 64.7
CBR_g48375 Chara braunii HOM05D007059 ORTHO05D009155 2.8e-35 152.9 122 57.4
CsaV3_5G013210 Cucumis sativus L. HOM05D007059 ORTHO05D009155 1.1e-31 141.0 166 51.2
Actinidia14379 Actinidia chinensis HOM05D007059 ORTHO05D009155 1.3e-21 107.5 56 87.5
BolC5t33201H Brassica oleracea HOM05D007059 ORTHO05D009155 6.6e-21 105.1 84 66.7
AT3G19900 Arabidopsis thaliana HOM05D007059 ORTHO05D009155 1.9e-20 103.6 157 43.3
SEGI_27177 Sequoiadendron giganteum HOM05D007059 ORTHO05D009155 3.3e-20 102.8 61 78.7
Cre01.g007050 Chlamydomonas reinhardtii HOM05D007059 ORTHO05D009155 6.9e-18 95.1 127 40.9
SMO364G0884 Selaginella moellendorffii HOM05D007059 ORTHO05D009155 8.4e-16 88.2 67 64.2
Cre03.g197850 Chlamydomonas reinhardtii HOM05D007059 ORTHO05D034487 3.3e-12 76.3 139 28.8
BraA05t21808Z Brassica rapa HOM05D007059 ORTHO05D040342 1.4e-10 70.9 45 82.2
A05p29230 Brassica napus HOM05D007059 ORTHO05D040342 1.2e-09 67.8 45 80.0
MCO14G049 Micromonas commoda HOM05D007059 ORTHO05D009155 2.0e-09 67.0 101 34.7


User provided reference genes

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