Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.12G026000 Glycine max HOM05D006333 ORTHO05D007799 6.3e-123 444.1 224 100.0
Phvul.011G028900 Phaseolus vulgaris HOM05D006333 ORTHO05D007799 1.3e-112 409.8 223 90.6
VMungo1127G0165 Vigna mungo HOM05D006333 ORTHO05D007799 1.4e-109 399.8 222 88.7
Ca_19901_v3 Cicer arietinum L. HOM05D006333 ORTHO05D007799 3.1e-106 388.7 220 86.4
Psat7g233400 Pisum sativum HOM05D006333 ORTHO05D007799 7.7e-105 384.0 224 87.1
Medtr4g023480 Medicago truncatula HOM05D006333 ORTHO05D007799 2.9e-104 382.1 224 86.2
Lj3g0001632 Lotus japonicus HOM05D006333 ORTHO05D007799 8.5e-104 380.6 221 86.0
Thecc.02G159600 Theobroma cacao HOM05D006333 ORTHO05D007799 8.3e-99 364.0 214 82.2
Ciclev10032700m.g Citrus clementina HOM05D006333 ORTHO05D007799 2.2e-96 355.9 214 79.9
COL.COLO4_08588 Corchorus olitorius HOM05D006333 ORTHO05D007799 2.2e-96 355.9 214 80.4
Duzib132G1109 Durio zibethinus HOM05D006333 ORTHO05D007799 1.5e-95 353.2 214 79.9
Aa31LG7G2140 Aethionema arabicum HOM05D006333 ORTHO05D007799 5.5e-95 351.3 214 79.4
CANSAT56G2519 Cannabis sativa HOM05D006333 ORTHO05D007799 5.5e-95 351.3 214 81.3
Gohir.A13G060400 Gossypium hirsutum HOM05D006333 ORTHO05D007799 7.2e-95 350.9 221 78.3
CiPaw.05G169800 Carya illinoinensis HOM05D006333 ORTHO05D007799 1.6e-94 349.7 221 76.9
Gohir.D13G061500 Gossypium hirsutum HOM05D006333 ORTHO05D007799 6.1e-94 347.8 214 79.4
Thhalv10008690m.g Eutrema salsugineum HOM05D006333 ORTHO05D007799 8.0e-94 347.4 214 79.0
TWI53G1586 Tripterygium wilfordii HOM05D006333 ORTHO05D007799 8.0e-94 347.4 214 79.4
Manes.04G057700 Manihot esculenta HOM05D006333 ORTHO05D007799 1.0e-93 347.1 214 79.4
Potri.007G072000 Populus trichocarpa HOM05D006333 ORTHO05D007799 3.0e-93 345.5 214 81.8
Gorai.013G070000 Gossypium raimondii HOM05D006333 ORTHO05D007799 4.0e-93 345.1 220 77.7
AT1G17330 Arabidopsis thaliana HOM05D006333 ORTHO05D007799 1.2e-92 343.6 214 77.6
CARHR017920 Cardamine hirsuta HOM05D006333 ORTHO05D007799 1.2e-92 343.6 214 78.5
Prupe.1G347700 Prunus persica HOM05D006333 ORTHO05D007799 1.5e-92 343.2 222 77.5
Sed0022709 Sechium edule HOM05D006333 ORTHO05D007799 1.5e-92 343.2 214 79.4
MELO3C024016.2 Cucumis melo HOM05D006333 ORTHO05D007799 3.4e-92 342.0 214 79.0
GSVIVG01012055001 Vitis vinifera HOM05D006333 ORTHO05D007799 4.4e-92 341.7 204 81.9
THA.LOC104808350 Tarenaya hassleriana HOM05D006333 ORTHO05D007799 1.7e-91 339.7 214 76.2
FvH4_4g36970 Fragaria vesca HOM05D006333 ORTHO05D007799 2.2e-91 339.3 225 75.1
AL1G29580 Arabidopsis lyrata HOM05D006333 ORTHO05D007799 4.9e-91 338.2 214 76.6
HanXRQChr12g0366301 Helianthus annuus HOM05D006333 ORTHO05D007799 1.4e-90 336.7 214 78.5
Dinv17616 Davidia involucrata HOM05D006333 ORTHO05D007799 2.4e-90 335.9 233 72.5
FAN07G1904 Fragaria x ananassa HOM05D006333 ORTHO05D007799 2.4e-90 335.9 225 73.8
MD13G1004800 Malus domestica HOM05D006333 ORTHO05D007799 2.4e-90 335.9 224 75.4
TPR.G9857 Trifolium pratense HOM05D006333 ORTHO05D007799 3.1e-90 335.5 193 86.0
CsaV3_3G031750 Cucumis sativus L. HOM05D006333 ORTHO05D007799 7.0e-90 334.3 214 78.5
Prupe.1G347900 Prunus persica HOM05D006333 ORTHO05D007799 7.0e-90 334.3 222 74.8
Eucgr.J00869 Eucalyptus grandis HOM05D006333 ORTHO05D007799 9.2e-90 334.0 212 76.9
Lj3A849G43 Lonicera japonica HOM05D006333 ORTHO05D007799 9.2e-90 334.0 218 75.2
Sp1g15450 Schrenkiella parvula HOM05D006333 ORTHO05D007799 1.6e-89 333.2 215 76.7
BcaC05g25649 Brassica carinata HOM05D006333 ORTHO05D007799 2.7e-89 332.4 221 74.7
BolC5t30276H Brassica oleracea HOM05D006333 ORTHO05D007799 2.7e-89 332.4 221 74.7
Rhsim09G0071800 Rhododendron simsii HOM05D006333 ORTHO05D007799 2.7e-89 332.4 216 76.9
CAN.G1011.5 Capsicum annuum HOM05D006333 ORTHO05D007799 4.5e-89 331.6 212 77.4
Hma1.2p1_0044F.1_g026090 Hydrangea macrophylla HOM05D006333 ORTHO05D007799 5.9e-89 331.3 221 73.3
C05p15710 Brassica napus HOM05D006333 ORTHO05D007799 7.7e-89 330.9 221 74.2
Carub.0001s1708 Capsella rubella HOM05D006333 ORTHO05D007799 7.7e-89 330.9 214 76.2
PGR044G2499 Punica granatum HOM05D006333 ORTHO05D007799 1.0e-88 330.5 214 75.7
Hund24376 Selenicereus undatus HOM05D006333 ORTHO05D007799 2.3e-88 329.3 212 75.9
Nitab4.5_0008825g0020 Nicotiana tabacum HOM05D006333 ORTHO05D007799 2.9e-88 328.9 221 74.2
Solyc02g014720.4 Solanum lycopersicum HOM05D006333 ORTHO05D007799 2.9e-88 328.9 214 76.6
RcHm_v2.0_Chr4g0446761 Rosa chinensis HOM05D006333 ORTHO05D007799 3.8e-88 328.6 219 74.9
CSS0049289 Camellia sinensis var. sinensis HOM05D006333 ORTHO05D007799 5.0e-88 328.2 214 75.2
Cfa008751 Carpinus fangiana HOM05D006333 ORTHO05D007799 6.6e-88 327.8 214 75.2
ECA233G4371 Erigeron canadensis HOM05D006333 ORTHO05D007799 6.6e-88 327.8 225 73.8
Lalb_Chr01g0001411 Lupinus albus HOM05D006333 ORTHO05D007799 8.6e-88 327.4 221 76.9
Nitab4.5_0003092g0070 Nicotiana tabacum HOM05D006333 ORTHO05D007799 8.6e-88 327.4 209 77.0
Atru.chr11.1164 Acer truncatum HOM05D006333 ORTHO05D007799 1.9e-87 326.2 214 72.9
A06p13260 Brassica napus HOM05D006333 ORTHO05D007799 2.5e-87 325.9 216 74.5
BraA06t24479Z Brassica rapa HOM05D006333 ORTHO05D007799 3.3e-87 325.5 221 73.3
Sopen02g004090 Solanum pennellii HOM05D006333 ORTHO05D007799 3.3e-87 325.5 214 75.7
PSO782G2700 Papaver somniferum HOM05D006333 ORTHO05D007799 9.5e-87 323.9 221 74.2
arahy.Tifrunner.gnm1.ann1.A0JP3J Arachis hypogaea HOM05D006333 ORTHO05D007799 2.1e-86 322.8 226 75.2
FAN17G3063 Fragaria x ananassa HOM05D006333 ORTHO05D007799 2.1e-86 322.8 249 67.1
Lsat_1_v5_gn_8_33120 Lactuca sativa HOM05D006333 ORTHO05D007799 2.1e-86 322.8 218 76.6
EL10Ac9g22952 Beta vulgaris HOM05D006333 ORTHO05D007799 8.0e-86 320.9 214 73.4
arahy.Tifrunner.gnm1.ann1.N7V6FU Arachis hypogaea HOM05D006333 ORTHO05D007799 2.3e-85 319.3 242 70.7
Nn5g28807 Nelumbo nucifera HOM05D006333 ORTHO05D007799 4.0e-85 318.5 220 71.8
MSTRG.11948 Avicennia marina HOM05D006333 ORTHO05D007799 6.8e-85 317.8 212 74.5
Aqoxy3G04253 Aquilegia oxysepala HOM05D006333 ORTHO05D007799 1.2e-84 317.0 212 73.6
BcaB07g34033 Brassica carinata HOM05D006333 ORTHO05D007799 3.7e-83 312.0 216 73.6
unitig_32.g11605 Utricularia gibba HOM05D006333 ORTHO05D007799 6.4e-83 311.2 212 72.2
FAN12G1853 Fragaria x ananassa HOM05D006333 ORTHO05D007799 4.1e-82 308.5 226 69.9
MBI06_g42293_MAGBIO Magnolia biondii HOM05D006333 ORTHO05D007799 7.0e-82 307.8 219 73.5
Sabra07G0060700 Salix brachista HOM05D006333 ORTHO05D007799 1.6e-81 306.6 251 66.1
Peaxi162Scf00334g00421 Petunia axillaris HOM05D006333 ORTHO05D007799 1.3e-80 303.5 200 77.5
Atru.chr11.2675 Acer truncatum HOM05D006333 ORTHO05D007799 1.7e-80 303.1 211 70.1
Migut.A00709 Erythranthe guttata HOM05D006333 ORTHO05D007799 2.3e-80 302.8 212 72.2
Sc17g0000100 Simmondsia chinensis HOM05D006333 ORTHO05D007799 5.0e-80 301.6 214 69.2
Atru.chr11.2676 Acer truncatum HOM05D006333 ORTHO05D007799 1.1e-79 300.4 211 69.7
Eucgr.J00870 Eucalyptus grandis HOM05D006333 ORTHO05D007799 5.6e-79 298.1 208 71.6
ClCG10G012010 Citrullus lanatus HOM05D006333 ORTHO05D007799 6.2e-78 294.7 200 75.5
PSO063G3232 Papaver somniferum HOM05D006333 ORTHO05D007799 1.2e-76 290.4 246 62.6
Cc11_g02420 Coffea canephora HOM05D006333 ORTHO05D007799 2.0e-76 289.7 214 70.6
CSS0015547 Camellia sinensis var. sinensis HOM05D006333 ORTHO05D007799 2.6e-76 289.3 214 69.2
ATR0618G379 Amborella trichopoda HOM05D006333 ORTHO05D007799 4.4e-76 288.5 215 66.5
DCAR_008496 Daucus carota HOM05D003141 ORTHO05D003633 7.5e-76 287.7 195 72.8
Os10g0486000 Oryza sativa ssp. japonica HOM05D006333 ORTHO05D007799 1.6e-73 280.0 216 66.7
AUR62017701 Chenopodium quinoa HOM05D006333 ORTHO05D007799 3.0e-72 275.8 214 64.5
Actinidia11766 Actinidia chinensis HOM05D006333 ORTHO05D007799 3.9e-72 275.4 217 67.7
SGA_v2.0_scaffold146G36264 Striga asiatica HOM05D006333 ORTHO05D007799 1.2e-70 270.4 248 59.7
Ah.01g001500 Amaranthus hybridus HOM05D006333 ORTHO05D007799 4.7e-70 268.5 178 74.2
AUR62032988 Chenopodium quinoa HOM05D006333 ORTHO05D007799 1.2e-68 263.8 204 64.7
HPP92_008575 Vanilla planifolia HOM05D006333 ORTHO05D007799 7.5e-68 261.2 219 63.0
Cpa.g.sc0.135 Carica papaya HOM05D006333 ORTHO05D007799 3.1e-61 239.2 154 76.0
SMO116G0442 Selaginella moellendorffii HOM05D006333 ORTHO05D007799 4.0e-61 238.8 218 56.9
SalBow7G0482 Salvia bowleyana HOM05D006333 ORTHO05D007799 1.7e-59 233.4 261 53.3
Haze_11767 Corylus avellana HOM05D006333 ORTHO05D007799 9.2e-58 227.6 188 64.9
TAR629G0175 Trochodendron aralioides HOM05D006333 ORTHO05D007799 1.6e-57 226.9 150 73.3
CDE02G3779 Ceratophyllum demersum HOM05D006333 ORTHO05D007799 3.5e-57 225.7 204 59.3
Pp3c7_23360 Physcomitrium patens HOM05D006333 ORTHO05D007799 4.6e-57 225.3 215 55.3
SGA_v2.0_scaffold173G39125 Striga asiatica HOM05D006333 ORTHO05D007799 5.1e-56 221.9 150 72.0
Cre05.g234647 Chlamydomonas reinhardtii HOM05D006333 ORTHO05D007799 1.2e-54 217.2 221 53.8
Zm00001eb045350 Zea mays HOM05D006333 ORTHO05D007799 2.3e-48 196.4 140 70.0
MCO07G572 Micromonas commoda HOM05D006333 ORTHO05D007799 1.5e-47 193.7 219 49.8
Actinidia13050 Actinidia chinensis HOM05D006333 ORTHO05D007799 1.6e-46 190.3 198 56.6
vmacro16037 Vaccinium macrocarpon HOM05D006333 ORTHO05D007799 3.6e-46 189.1 313 39.9
PRCOL_00000482 Prasinoderma coloniale HOM05D006333 ORTHO05D007799 6.6e-40 168.3 216 44.9
Mapoly0006s0058 Marchantia polymorpha HOM05D006333 ORTHO05D007799 1.8e-37 160.2 150 52.7
CBR_g5629 Chara braunii HOM05D006333 ORTHO05D007799 4.9e-35 152.1 380 32.1
SalBow1G5083 Salvia bowleyana HOM05D006333 ORTHO05D007799 7.9e-33 144.8 102 69.6
QL03p044200 Quercus lobata HOM05D006333 ORTHO05D007799 1.0e-32 144.4 83 79.5
Ah.05g173900 Amaranthus hybridus HOM05D006333 ORTHO05D007799 6.5e-27 125.2 84 71.4
Aa31sc968G10 Aethionema arabicum HOM05D006333 ORTHO05D007799 1.9e-23 113.6 143 49.0
Thecc.08G107200 Theobroma cacao HOM05D006333 ORTHO05D007799 5.3e-21 105.5 70 71.4
QL03p044193 Quercus lobata HOM05D006333 ORTHO05D007799 2.9e-19 99.8 67 70.1
Cpa.g.sc0.136 Carica papaya HOM05D006333 ORTHO05D007799 3.8e-19 99.4 62 82.3
Haze_06289 Corylus avellana HOM05D006333 ORTHO05D007799 2.7e-17 93.2 51 84.3
SalBow1G0042 Salvia bowleyana HOM05D006333 ORTHO05D007799 3.9e-16 89.4 58 75.9
Oeu044913.1 Olea europaea HOM05D006333 ORTHO05D007799 7.4e-15 85.1 56 80.4
Haze_18642 Corylus avellana HOM05D006333 ORTHO05D007799 9.7e-15 84.7 68 60.3
Cfa024705 Carpinus fangiana HOM05D006333 ORTHO05D007799 3.1e-13 79.7 222 31.5
MBI06_g42292_MAGBIO Magnolia biondii HOM05D006333 ORTHO05D007799 1.2e-12 77.8 49 75.5
TAR629G1621 Trochodendron aralioides HOM05D006333 ORTHO05D007799 1.0e-11 74.7 49 75.5
Cfa023716 Carpinus fangiana HOM05D006333 ORTHO05D007799 2.9e-11 73.2 99 41.4
Aa31LG4G11880 Aethionema arabicum HOM05D006333 ORTHO05D007799 1.9e-10 70.5 57 63.2
Aa31sc286G50 Aethionema arabicum HOM05D006333 ORTHO05D007799 7.9e-09 65.1 38 81.6


User provided reference genes

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