Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.09G226900 Glycine max HOM05D007133 ORTHO05D008954 1.0e-41 172.9 86 100.0
Glyma.12G009900 Glycine max HOM05D007133 ORTHO05D008954 1.0e-41 172.9 86 100.0
Phvul.001G156100 Phaseolus vulgaris HOM05D007133 ORTHO05D008954 5.5e-35 150.6 81 92.6
Phvul.011G010800 Phaseolus vulgaris HOM05D007133 ORTHO05D008954 7.2e-35 150.2 84 89.3
arahy.Tifrunner.gnm1.ann1.1B9UE2 Arachis hypogaea HOM05D007133 ORTHO05D008954 4.8e-31 137.5 84 78.6
arahy.Tifrunner.gnm1.ann1.PZX0PK Arachis hypogaea HOM05D007133 ORTHO05D008954 4.8e-31 137.5 84 78.6
Medtr0512s0010 Medicago truncatula HOM05D007133 ORTHO05D008954 4.8e-31 137.5 84 79.8
Lalb_Chr04g0263851 Lupinus albus HOM05D007133 ORTHO05D008954 6.3e-31 137.1 81 81.5
TPR.G30180 Trifolium pratense HOM05D007133 ORTHO05D008954 8.2e-31 136.7 84 81.0
Dinv03122 Davidia involucrata HOM05D007133 ORTHO05D008954 1.4e-30 136.0 84 77.4
Dinv09308 Davidia involucrata HOM05D007133 ORTHO05D008954 1.4e-30 136.0 84 77.4
Ciclev10033166m.g Citrus clementina HOM05D007133 ORTHO05D008954 1.8e-30 135.6 84 72.6
Nn7g36332 Nelumbo nucifera HOM05D007133 ORTHO05D008954 2.4e-30 135.2 84 76.2
CsaV3_7G030730 Cucumis sativus L. HOM05D007133 ORTHO05D008954 3.1e-30 134.8 79 81.0
Sc10g0000360 Simmondsia chinensis HOM05D007133 ORTHO05D008954 3.1e-30 134.8 84 77.4
Eucgr.G03322 Eucalyptus grandis HOM05D007133 ORTHO05D008954 4.1e-30 134.4 84 76.2
Gohir.A12G100700 Gossypium hirsutum HOM05D007133 ORTHO05D008954 4.1e-30 134.4 81 77.8
Gohir.D12G103551 Gossypium hirsutum HOM05D007133 ORTHO05D008954 4.1e-30 134.4 81 77.8
Gorai.008G112700 Gossypium raimondii HOM05D007133 ORTHO05D008954 4.1e-30 134.4 81 77.8
Peaxi162Scf01270g00118 Petunia axillaris HOM05D007133 ORTHO05D008954 4.1e-30 134.4 84 78.6
vmacro21138 Vaccinium macrocarpon HOM05D007133 ORTHO05D008954 5.3e-30 134.0 84 75.0
Lj3g0009786 Lotus japonicus HOM05D007133 ORTHO05D008954 7.0e-30 133.7 84 77.4
Actinidia21538 Actinidia chinensis HOM05D007133 ORTHO05D008954 9.1e-30 133.3 84 75.0
Oeu027371.1 Olea europaea HOM05D007133 ORTHO05D008954 9.1e-30 133.3 84 75.0
Hund26515 Selenicereus undatus HOM05D007133 ORTHO05D008954 9.1e-30 133.3 84 75.0
CiPaw.14G003100 Carya illinoinensis HOM05D007133 ORTHO05D008954 1.2e-29 132.9 84 71.4
Cc02_g28790 Coffea canephora HOM05D007133 ORTHO05D008954 1.2e-29 132.9 84 76.2
Manes.10G136200 Manihot esculenta HOM05D007133 ORTHO05D008954 1.6e-29 132.5 81 76.5
Sed0015487 Sechium edule HOM05D007133 ORTHO05D008954 1.6e-29 132.5 77 80.5
Ca_26645_v3 Cicer arietinum L. HOM05D007133 ORTHO05D008954 2.0e-29 132.1 84 78.6
COL.COLO4_12337 Corchorus olitorius HOM05D007133 ORTHO05D008954 2.6e-29 131.7 84 72.6
Potri.001G262000 Populus trichocarpa HOM05D007133 ORTHO05D008954 3.5e-29 131.3 84 73.8
TWI53G1532 Tripterygium wilfordii HOM05D007133 ORTHO05D008954 3.5e-29 131.3 84 75.0
Lalb_Chr25g0282521 Lupinus albus HOM05D007133 ORTHO05D008954 4.5e-29 131.0 81 77.8
Potri.009G056800 Populus trichocarpa HOM05D007133 ORTHO05D008954 5.9e-29 130.6 83 73.5
Thecc.01G406600 Theobroma cacao HOM05D007133 ORTHO05D008954 7.7e-29 130.2 84 73.8
PGR031G3629 Punica granatum HOM05D007133 ORTHO05D008954 1.0e-28 129.8 81 77.8
GSVIVG01032212001 Vitis vinifera HOM05D007133 ORTHO05D008954 1.0e-28 129.8 84 73.8
Duzib268G0834 Durio zibethinus HOM05D007133 ORTHO05D008954 1.3e-28 129.4 81 74.1
TWI09G1631 Tripterygium wilfordii HOM05D007133 ORTHO05D008954 1.3e-28 129.4 84 73.8
CSS0001581 Camellia sinensis var. sinensis HOM05D007133 ORTHO05D008954 5.0e-28 127.5 81 74.1
Ah.10g038590 Amaranthus hybridus HOM05D007133 ORTHO05D008954 6.5e-28 127.1 84 72.6
THA.LOC104817576 Tarenaya hassleriana HOM05D007133 ORTHO05D008954 8.5e-28 126.7 78 74.4
MELO3C023583.2 Cucumis melo HOM05D007133 ORTHO05D008954 1.1e-27 126.3 93 68.8
Migut.N01798 Erythranthe guttata HOM05D007133 ORTHO05D008954 1.5e-27 125.9 84 69.0
SGA_v2.0_scaffold5G02955 Striga asiatica HOM05D007133 ORTHO05D008954 1.5e-27 125.9 77 79.2
MD02G1300200 Malus domestica HOM05D007133 ORTHO05D008954 3.2e-27 124.8 81 70.4
FvH4_7g01820 Fragaria vesca HOM05D007133 ORTHO05D008954 4.2e-27 124.4 84 71.4
FAN01G1667 Fragaria x ananassa HOM05D007133 ORTHO05D008954 4.2e-27 124.4 84 71.4
Prupe.2G024400 Prunus persica HOM05D007133 ORTHO05D008954 7.2e-27 123.6 84 66.7
Sabra09G0041600 Salix brachista HOM05D007133 ORTHO05D008954 9.4e-27 123.2 83 72.3
Nitab4.5_0008942g0020 Nicotiana tabacum HOM05D007133 ORTHO05D008954 1.2e-26 122.9 84 73.8
Lsat_1_v5_gn_1_104961 Lactuca sativa HOM05D007133 ORTHO05D008954 1.6e-26 122.5 85 68.2
TAR633G1269 Trochodendron aralioides HOM05D007133 ORTHO05D008954 1.6e-26 122.5 85 68.2
CDE08G1151 Ceratophyllum demersum HOM05D007133 ORTHO05D008954 2.1e-26 122.1 85 70.6
HanXRQChr06g0179721 Helianthus annuus HOM05D007133 ORTHO05D008954 3.6e-26 121.3 86 67.4
MD07G1024700 Malus domestica HOM05D007133 ORTHO05D008954 4.7e-26 120.9 80 70.0
Aqoxy1G00141 Aquilegia oxysepala HOM05D007133 ORTHO05D008954 1.0e-25 119.8 87 70.1
Atru.chr11.2512 Acer truncatum HOM05D007133 ORTHO05D008954 1.4e-25 119.4 83 73.5
AUR62023097 Chenopodium quinoa HOM05D007133 ORTHO05D008954 1.4e-25 119.4 81 67.9
RcHm_v2.0_Chr1g0318451 Rosa chinensis HOM05D007133 ORTHO05D008954 1.4e-25 119.4 81 70.4
ECA248G0684 Erigeron canadensis HOM05D007133 ORTHO05D008954 1.8e-25 119.0 77 71.4
EL10Ac2g04374 Beta vulgaris HOM05D007133 ORTHO05D008954 2.3e-25 118.6 81 71.6
Solyc01g087880.3 Solanum lycopersicum HOM05D007133 ORTHO05D008954 3.0e-25 118.2 85 70.6
Sopen01g034810 Solanum pennellii HOM05D007133 ORTHO05D008954 3.0e-25 118.2 85 70.6
PSO063G0957 Papaver somniferum HOM05D007133 ORTHO05D008954 5.2e-25 117.5 84 66.7
ClCG09G004410 Citrullus lanatus HOM05D007133 ORTHO05D008954 6.7e-25 117.1 116 54.3
AL5G32580 Arabidopsis lyrata HOM05D007133 ORTHO05D008954 8.8e-25 116.7 87 67.8
PSO170G5856 Papaver somniferum HOM05D007133 ORTHO05D008954 8.8e-25 116.7 84 66.7
BcaB01g00452 Brassica carinata HOM05D007133 ORTHO05D008954 1.2e-24 116.3 87 63.2
C08p27290 Brassica napus HOM05D007133 ORTHO05D008954 1.2e-24 116.3 87 63.2
BolC8t50346H Brassica oleracea HOM05D007133 ORTHO05D008954 1.2e-24 116.3 87 63.2
PGSC0003DMG400006836 Solanum tuberosum HOM05D007133 ORTHO05D008954 1.2e-24 116.3 85 69.4
AT3G52040 Arabidopsis thaliana HOM05D007133 ORTHO05D008954 1.5e-24 115.9 82 67.1
CANSAT80G0888 Cannabis sativa HOM05D007133 ORTHO05D008954 1.5e-24 115.9 79 68.4
Carub.0005s1836 Capsella rubella HOM05D007133 ORTHO05D008954 1.5e-24 115.9 87 67.8
Zm00001eb332910 Zea mays HOM05D007133 ORTHO05D008954 1.5e-24 115.9 81 67.9
A09p45100 Brassica napus HOM05D007133 ORTHO05D008954 4.4e-24 114.4 87 62.1
BraA09t39971Z Brassica rapa HOM05D007133 ORTHO05D008954 4.4e-24 114.4 87 62.1
Aa31LG10G7080 Aethionema arabicum HOM05D007133 ORTHO05D008954 2.2e-23 112.1 77 70.1
BcaC06g33021 Brassica carinata HOM05D007133 ORTHO05D008954 2.2e-23 112.1 77 67.5
Thhalv10010861m.g Eutrema salsugineum HOM05D007133 ORTHO05D008954 4.8e-23 110.9 87 63.2
FAN10G0509 Fragaria x ananassa HOM05D007133 ORTHO05D008954 1.1e-22 109.8 76 68.4
C07p46740 Brassica napus HOM05D007133 ORTHO05D008954 1.8e-22 109.0 77 64.9
BolC7t45192H Brassica oleracea HOM05D007133 ORTHO05D008954 1.8e-22 109.0 77 64.9
BcaC06g33378 Brassica carinata HOM05D007133 ORTHO05D008954 2.4e-22 108.6 77 64.9
Eucgr.G03325 Eucalyptus grandis HOM05D007133 ORTHO05D008954 2.4e-22 108.6 81 64.2
Nitab4.5_0001244g0090 Nicotiana tabacum HOM05D007133 ORTHO05D008954 2.4e-22 108.6 110 56.4
unitig_8.g3622 Utricularia gibba HOM05D007133 ORTHO05D008954 4.1e-22 107.8 71 73.2
SalBow6G3002 Salvia bowleyana HOM05D007133 ORTHO05D008954 9.1e-22 106.7 119 49.6
CARHR161670 Cardamine hirsuta HOM05D007133 ORTHO05D008954 1.2e-21 106.3 87 63.2
BraA03t13967Z Brassica rapa HOM05D007133 ORTHO05D008954 1.6e-21 105.9 77 63.6
A03p48620 Brassica napus HOM05D007133 ORTHO05D008954 2.7e-21 105.1 77 62.3
Cc00_g19310 Coffea canephora HOM05D004771 ORTHO05D005565 3.5e-21 104.8 81 70.4
Haze_03143 Corylus avellana HOM05D007133 ORTHO05D008954 1.0e-20 103.2 142 43.7
Haze_03146 Corylus avellana HOM05D007133 ORTHO05D008954 1.0e-20 103.2 142 43.7
Medtr4g101060 Medicago truncatula HOM05D007133 ORTHO05D008954 3.8e-20 101.3 59 81.4
Dinv09304 Davidia involucrata HOM05D007133 ORTHO05D008954 1.5e-16 89.4 84 57.1
HPP92_001020 Vanilla planifolia HOM05D007133 ORTHO05D008954 7.5e-16 87.0 61 67.2
Psat7g197280 Pisum sativum HOM05D007133 ORTHO05D008954 1.3e-15 86.3 58 75.9
Rhsim01G0126300 Rhododendron simsii HOM05D007133 ORTHO05D008954 2.8e-15 85.1 55 78.2
MBI19_g09240_MAGBIO Magnolia biondii HOM05D007133 ORTHO05D008954 4.8e-15 84.3 185 33.0
Pp3c9_17680 Physcomitrium patens HOM05D007133 ORTHO05D008954 4.8e-15 84.3 80 55.0
QL04p010011 Quercus lobata HOM05D007133 ORTHO05D008954 8.3e-15 83.6 48 83.3
Mapoly0049s0103 Marchantia polymorpha HOM05D007133 ORTHO05D008954 3.5e-13 78.2 84 50.0
Hma1.2p1_0685F.1_g203210 Hydrangea macrophylla HOM05D007133 ORTHO05D008954 1.0e-12 76.6 49 75.5
AagrBONN_evm.TU.Sc2ySwM_344.2738 Anthoceros agrestis HOM05D007133 ORTHO05D008954 2.3e-12 75.5 79 50.6
Duzib133G0944 Durio zibethinus HOM05D007133 ORTHO05D008954 2.3e-12 75.5 48 75.0
Os01g0271700 Oryza sativa ssp. japonica HOM05D007133 ORTHO05D008954 3.3e-11 71.6 48 70.8
Cc00_g26940 Coffea canephora HOM05D007133 ORTHO05D008954 8.0e-10 67.0 54 72.2
Rhsim01G0126100 Rhododendron simsii HOM05D007133 ORTHO05D008954 2.2e-07 58.9 37 67.6
MCO03G415 Micromonas commoda HOM05D057529 ORTHO05D044323 4.1e-06 54.7 78 38.5


User provided reference genes

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