Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.11G251300 Glycine max HOM05D004124 ORTHO05D004779 3.3e-145 518.5 284 100.0
Glyma.18G005700 Glycine max HOM05D004124 ORTHO05D004779 1.4e-143 513.1 284 98.2
VMungo1383G0738 Vigna mungo HOM05D004124 ORTHO05D004779 1.2e-139 500.0 283 95.8
Phvul.001G262500 Phaseolus vulgaris HOM05D004124 ORTHO05D004779 3.6e-139 498.4 284 95.4
Ca_16453_v3 Cicer arietinum L. HOM05D004124 ORTHO05D004779 6.1e-131 471.1 286 90.6
arahy.Tifrunner.gnm1.ann1.JS6392 Arachis hypogaea HOM05D004124 ORTHO05D004779 1.1e-129 466.8 285 90.9
Lj6g0002227 Lotus japonicus HOM05D004124 ORTHO05D004779 2.6e-129 465.7 285 90.2
arahy.Tifrunner.gnm1.ann1.B7Q2TL Arachis hypogaea HOM05D004124 ORTHO05D004779 4.1e-127 458.4 296 87.5
CANSAT01G0376 Cannabis sativa HOM05D004124 ORTHO05D004779 2.2e-125 452.6 286 86.0
Haze_12426 Corylus avellana HOM05D004124 ORTHO05D004779 2.2e-125 452.6 283 86.9
Psat5g096680 Pisum sativum HOM05D004124 ORTHO05D004779 3.8e-125 451.8 286 87.4
Medtr3g085190 Medicago truncatula HOM05D004124 ORTHO05D004779 6.1e-123 444.5 285 86.3
Potri.001G056000 Populus trichocarpa HOM05D004124 ORTHO05D004779 8.0e-123 444.1 285 86.0
GSVIVG01010495001 Vitis vinifera HOM05D004124 ORTHO05D004779 8.0e-123 444.1 283 86.2
Dinv10949 Davidia involucrata HOM05D004124 ORTHO05D004779 3.0e-122 442.2 283 85.2
Gohir.A04G140100 Gossypium hirsutum HOM05D004124 ORTHO05D004779 5.2e-122 441.4 286 83.9
Duzib251G0523 Durio zibethinus HOM05D004124 ORTHO05D004779 6.7e-122 441.0 286 85.0
CiPaw.06G103200 Carya illinoinensis HOM05D004124 ORTHO05D004779 1.1e-121 440.3 284 85.6
Cc11_g16980 Coffea canephora HOM05D004124 ORTHO05D004779 1.1e-121 440.3 283 83.0
Manes.12G010400 Manihot esculenta HOM05D004124 ORTHO05D004779 9.7e-121 437.2 286 83.6
Lalb_Chr11g0075781 Lupinus albus HOM05D004124 ORTHO05D004779 1.3e-120 436.8 284 84.9
COL.COLO4_20412 Corchorus olitorius HOM05D004124 ORTHO05D004779 2.2e-120 436.0 241 85.1
Gorai.012G176300 Gossypium raimondii HOM05D004124 ORTHO05D004779 2.2e-120 436.0 285 83.2
RcHm_v2.0_Chr4g0430131 Rosa chinensis HOM05D004124 ORTHO05D004779 2.8e-120 435.6 286 83.2
Gorai.005G166600 Gossypium raimondii HOM05D004124 ORTHO05D004779 3.7e-120 435.3 284 83.8
Gohir.D04G183300 Gossypium hirsutum HOM05D004124 ORTHO05D004779 8.2e-120 434.1 288 83.0
PGR102G1761 Punica granatum HOM05D004124 ORTHO05D004779 1.8e-119 433.0 286 82.9
Gohir.A03G125700 Gossypium hirsutum HOM05D004124 ORTHO05D004779 7.0e-119 431.0 285 83.2
Sabra01G0040400 Salix brachista HOM05D004124 ORTHO05D004779 7.0e-119 431.0 285 83.5
Gohir.D02G148500 Gossypium hirsutum HOM05D004124 ORTHO05D004779 1.6e-118 429.9 287 83.6
MELO3C011859.2 Cucumis melo HOM05D004124 ORTHO05D004779 2.0e-118 429.5 286 82.2
CsaV3_5G030210 Cucumis sativus L. HOM05D004124 ORTHO05D004779 2.0e-118 429.5 286 82.2
Potri.003G172500 Populus trichocarpa HOM05D004124 ORTHO05D004779 5.9e-118 427.9 285 83.9
Ciclev10033913m.g Citrus clementina HOM05D004124 ORTHO05D004779 1.0e-117 427.2 306 79.4
FAN17G0270 Fragaria x ananassa HOM05D004124 ORTHO05D004779 1.0e-117 427.2 285 81.1
FAN22G1987 Fragaria x ananassa HOM05D004124 ORTHO05D004779 1.7e-117 426.4 285 81.4
FAN07G1336 Fragaria x ananassa HOM05D004124 ORTHO05D004779 2.9e-117 425.6 285 80.7
TWI18G0339 Tripterygium wilfordii HOM05D004124 ORTHO05D004779 3.8e-117 425.2 286 82.5
FvH4_4g23660 Fragaria vesca HOM05D004124 ORTHO05D004779 5.0e-117 424.9 286 81.1
FAN12G0357 Fragaria x ananassa HOM05D004124 ORTHO05D004779 6.5e-117 424.5 285 81.1
Eucgr.H04636 Eucalyptus grandis HOM05D004124 ORTHO05D004779 2.5e-116 422.5 286 81.5
Atru.chr11.2334 Acer truncatum HOM05D004124 ORTHO05D004779 9.4e-116 420.6 284 82.0
TPR.G17791 Trifolium pratense HOM05D004124 ORTHO05D004779 1.6e-115 419.9 287 83.3
MD16G1120200 Malus domestica HOM05D004124 ORTHO05D004779 4.7e-115 418.3 288 82.3
QL03p052498 Quercus lobata HOM05D004124 ORTHO05D004779 6.1e-115 417.9 285 80.7
Prupe.1G225000 Prunus persica HOM05D004124 ORTHO05D004779 1.4e-114 416.8 221 87.3
Rhsim12G0025300 Rhododendron simsii HOM05D004124 ORTHO05D004779 3.0e-114 415.6 283 81.3
Nn5g26967 Nelumbo nucifera HOM05D004124 ORTHO05D004779 4.4e-113 411.8 284 81.0
Nn8g41237 Nelumbo nucifera HOM05D004124 ORTHO05D004779 3.7e-112 408.7 286 78.7
Lalb_Chr08g0230601 Lupinus albus HOM05D004124 ORTHO05D004779 4.8e-112 408.3 285 82.8
TAR626G1310 Trochodendron aralioides HOM05D004124 ORTHO05D004779 1.1e-111 407.1 286 79.4
Sabra03G0126200 Salix brachista HOM05D004124 ORTHO05D004779 4.1e-111 405.2 266 83.8
TAR383G0859 Trochodendron aralioides HOM05D004124 ORTHO05D004779 5.4e-111 404.8 283 79.5
Duzib248G0967 Durio zibethinus HOM05D004124 ORTHO05D004779 7.0e-111 404.4 285 81.1
Sed0002251 Sechium edule HOM05D004124 ORTHO05D004779 7.7e-110 401.0 286 79.7
Lalb_Chr07g0187111 Lupinus albus HOM05D004124 ORTHO05D004779 1.0e-109 400.6 286 79.4
MSTRG.8009 Avicennia marina HOM05D004124 ORTHO05D004779 1.3e-109 400.2 284 78.9
Nitab4.5_0000861g0060 Nicotiana tabacum HOM05D004124 ORTHO05D004779 2.9e-109 399.1 283 78.1
Lalb_Chr13g0294351 Lupinus albus HOM05D004124 ORTHO05D004779 3.8e-109 398.7 286 78.3
Actinidia09646 Actinidia chinensis HOM05D004124 ORTHO05D004779 2.5e-108 396.0 229 79.9
AUR62028920 Chenopodium quinoa HOM05D004124 ORTHO05D004779 2.5e-108 396.0 287 78.0
Peaxi162Scf00128g01335 Petunia axillaris HOM05D004124 ORTHO05D004779 2.5e-108 396.0 283 78.1
AUR62005628 Chenopodium quinoa HOM05D004124 ORTHO05D004779 3.2e-108 395.6 287 77.7
PGSC0003DMG400034304 Solanum tuberosum HOM05D004124 ORTHO05D004779 7.2e-108 394.4 284 77.1
Sopen05g010890 Solanum pennellii HOM05D004124 ORTHO05D004779 1.2e-107 393.7 284 77.1
MBI13_g33572_MAGBIO Magnolia biondii HOM05D004124 ORTHO05D004779 2.1e-107 392.9 288 76.7
EL10Ac6g13513 Beta vulgaris HOM05D004124 ORTHO05D004779 6.1e-107 391.3 287 76.3
Aa31sc584G20 Aethionema arabicum HOM05D004124 ORTHO05D004779 5.2e-106 388.3 286 75.5
Solyc05g015500.4 Solanum lycopersicum HOM05D004124 ORTHO05D004779 5.2e-106 388.3 282 76.6
Actinidia30642 Actinidia chinensis HOM05D004124 ORTHO05D004779 8.8e-106 387.5 284 76.8
MSTRG.500 Avicennia marina HOM05D004124 ORTHO05D004779 8.8e-106 387.5 241 75.9
Thhalv10018870m.g Eutrema salsugineum HOM05D004124 ORTHO05D004779 4.4e-105 385.2 290 75.9
CAN.G163.7 Capsicum annuum HOM05D004124 ORTHO05D004779 1.3e-104 383.6 283 76.3
Carub.0002s1361 Capsella rubella HOM05D004124 ORTHO05D004779 1.4e-103 380.2 288 75.0
THA.LOC104807133 Tarenaya hassleriana HOM05D004124 ORTHO05D004779 1.8e-103 379.8 287 74.6
vmacro01057 Vaccinium macrocarpon HOM05D004124 ORTHO05D004779 2.4e-103 379.4 340 66.5
THA.LOC104807526 Tarenaya hassleriana HOM05D004124 ORTHO05D004779 9.1e-103 377.5 286 72.4
AL2G25860 Arabidopsis lyrata HOM05D004124 ORTHO05D004779 1.2e-102 377.1 243 73.7
Actinidia08066 Actinidia chinensis HOM05D004124 ORTHO05D004779 1.6e-102 376.7 319 69.6
PSO170G5699 Papaver somniferum HOM05D004124 ORTHO05D004779 2.7e-102 375.9 293 74.4
AT1G67325 Arabidopsis thaliana HOM05D004124 ORTHO05D004779 3.5e-102 375.6 243 73.7
Sp5g22270 Schrenkiella parvula HOM05D004124 ORTHO05D004779 7.7e-102 374.4 289 75.1
Migut.K00950 Erythranthe guttata HOM05D004124 ORTHO05D004779 1.0e-101 374.0 286 74.8
PSO063G2768 Papaver somniferum HOM05D004124 ORTHO05D004779 1.0e-101 374.0 293 74.1
Hund06093 Selenicereus undatus HOM05D004124 ORTHO05D004779 1.7e-101 373.2 240 74.6
DCAR_024098 Daucus carota HOM05D004124 ORTHO05D004779 2.3e-101 372.9 286 73.4
SGA_v2.0_scaffold391G50628 Striga asiatica HOM05D004124 ORTHO05D004779 2.9e-101 372.5 286 73.4
THA.LOC104825500 Tarenaya hassleriana HOM05D004124 ORTHO05D004779 2.9e-101 372.5 240 73.3
ECA233G0726 Erigeron canadensis HOM05D004124 ORTHO05D004779 3.3e-100 369.0 284 74.3
CARHR059820 Cardamine hirsuta HOM05D004124 ORTHO05D004779 4.3e-100 368.6 240 72.9
Thecc.02G206600 Theobroma cacao HOM05D004124 ORTHO05D004779 2.1e-99 366.3 210 83.3
ECA234G0541 Erigeron canadensis HOM05D004124 ORTHO05D004779 8.0e-99 364.4 232 72.0
Hund25468 Selenicereus undatus HOM05D004124 ORTHO05D004779 5.2e-98 361.7 260 68.5
Manes.13G011200 Manihot esculenta HOM05D004124 ORTHO05D004779 2.6e-97 359.4 285 72.3
Lj6A827G48 Lonicera japonica HOM05D004124 ORTHO05D004779 3.4e-97 359.0 208 77.4
Aqoxy7G02609 Aquilegia oxysepala HOM05D004124 ORTHO05D004779 6.4e-96 354.8 287 73.5
ATR0626G238 Amborella trichopoda HOM05D004124 ORTHO05D004779 1.8e-95 353.2 287 70.7
BcaB03g15346 Brassica carinata HOM05D004124 ORTHO05D004779 1.2e-94 350.5 290 72.1
HanXRQChr17g0569011 Helianthus annuus HOM05D004124 ORTHO05D004779 7.8e-94 347.8 237 69.2
Eucgr.B03499 Eucalyptus grandis HOM05D004124 ORTHO05D004779 1.7e-93 346.7 283 71.7
HanXRQChr12g0372641 Helianthus annuus HOM05D004124 ORTHO05D004779 5.0e-93 345.1 238 69.7
DCAR_026459 Daucus carota HOM05D004124 ORTHO05D004779 6.6e-93 344.7 223 70.4
Sed0008103 Sechium edule HOM05D004124 ORTHO05D004779 6.6e-93 344.7 232 71.6
CiPaw.05G108900 Carya illinoinensis HOM05D004124 ORTHO05D004779 1.0e-90 337.4 243 80.7
Lj3A1069T45 Lonicera japonica HOM05D004124 ORTHO05D004779 2.3e-90 336.3 268 73.1
C06p38790 Brassica napus HOM05D004124 ORTHO05D004779 2.6e-89 332.8 292 69.9
BolC6t38971H Brassica oleracea HOM05D004124 ORTHO05D004779 2.2e-88 329.7 292 69.5
Duzib268G1736 Durio zibethinus HOM05D004124 ORTHO05D004779 3.7e-88 328.9 231 82.7
BraA07t30886Z Brassica rapa HOM05D004124 ORTHO05D004779 6.4e-88 328.2 295 69.5
A07p32620 Brassica napus HOM05D004124 ORTHO05D004779 8.3e-88 327.8 293 69.6
Lsat_1_v5_gn_4_400 Lactuca sativa HOM05D004124 ORTHO05D004779 1.9e-87 326.6 248 68.5
CSS0020706 Camellia sinensis var. sinensis HOM05D004124 ORTHO05D004779 5.4e-87 325.1 227 80.6
HanXRQChr12g0361221 Helianthus annuus HOM05D004124 ORTHO05D004779 2.7e-86 322.8 238 66.8
A07p33920 Brassica napus HOM05D000660 ORTHO05D000766 1.3e-85 320.5 248 66.1
C06p42940 Brassica napus HOM05D004124 ORTHO05D004779 1.7e-85 320.1 292 68.2
Sc04g0010190 Simmondsia chinensis HOM05D004124 ORTHO05D004779 3.0e-85 319.3 287 68.6
BraA07t31018Z Brassica rapa HOM05D000660 ORTHO05D000766 4.3e-84 315.5 291 68.4
CSS0002767 Camellia sinensis var. sinensis HOM05D004124 ORTHO05D004779 7.3e-84 314.7 196 77.0
BolC6t39143H Brassica oleracea HOM05D004124 ORTHO05D004779 4.7e-83 312.0 291 67.7
ClCG11G013590 Citrullus lanatus HOM05D004124 ORTHO05D004779 3.4e-81 305.8 285 66.3
unitig_749.g13306 Utricularia gibba HOM05D004124 ORTHO05D004779 3.7e-80 302.4 286 64.7
Ah.03g136110 Amaranthus hybridus HOM05D004124 ORTHO05D004779 7.1e-79 298.1 230 63.9
Nitab4.5_0003900g0010 Nicotiana tabacum HOM05D004124 ORTHO05D004779 7.3e-76 288.1 227 73.6
Zm00001eb174550 Zea mays HOM05D004124 ORTHO05D004779 2.8e-75 286.2 245 60.4
Oeu006524.1 Olea europaea HOM05D004124 ORTHO05D004779 3.6e-75 285.8 198 68.7
CDE04G3109 Ceratophyllum demersum HOM05D004124 ORTHO05D004779 1.2e-70 270.8 236 61.9
Zm00001eb035500 Zea mays HOM05D004124 ORTHO05D004779 4.3e-68 262.3 245 56.7
Oeu049141.1 Olea europaea HOM05D004124 ORTHO05D004779 1.6e-67 260.4 217 60.8
HPP92_015269 Vanilla planifolia HOM05D004124 ORTHO05D004779 5.2e-66 255.4 201 63.7
Lsat_1_v5_gn_8_147801 Lactuca sativa HOM05D004124 ORTHO05D004779 1.2e-65 254.2 244 57.4
Os08g0521400 Oryza sativa ssp. japonica HOM05D004124 ORTHO05D004779 4.6e-62 242.3 247 53.8
Lsat_1_v5_gn_5_94821 Lactuca sativa HOM05D004124 ORTHO05D004779 9.9e-49 198.0 243 60.1
Cpa.g.sc43.62 Carica papaya HOM05D004124 ORTHO05D004779 7.1e-47 191.8 154 59.7
HanXRQChr08g0221261 Helianthus annuus HOM05D004124 ORTHO05D004779 7.4e-44 181.8 128 68.0
Pp3c4_8110 Physcomitrium patens HOM05D004124 ORTHO05D004779 1.2e-33 147.9 245 40.8
AagrBONN_evm.TU.Sc2ySwM_340.309 Anthoceros agrestis HOM05D004124 ORTHO05D004779 1.3e-32 144.4 253 36.8
SMO200G0023 Selaginella moellendorffii HOM05D004124 ORTHO05D004779 3.2e-31 139.8 239 37.2
Mapoly0005s0267 Marchantia polymorpha HOM05D004124 ORTHO05D004779 3.0e-29 133.3 251 35.1
CiPaw.14G021000 Carya illinoinensis HOM05D004124 ORTHO05D004779 1.9e-28 130.6 228 38.6
PGR083G0898 Punica granatum HOM05D004124 ORTHO05D004779 3.3e-28 129.8 187 45.5
arahy.Tifrunner.gnm1.ann1.FNBZ5S Arachis hypogaea HOM05D004124 ORTHO05D004779 7.4e-28 128.6 224 40.2
CiPaw.13G027200 Carya illinoinensis HOM05D002637 ORTHO05D008095 9.7e-28 128.3 226 38.9
Nn1g00866 Nelumbo nucifera HOM05D004124 ORTHO05D004779 8.2e-27 125.2 236 39.0
Glyma.18G252600 Glycine max HOM05D004124 ORTHO05D004779 3.1e-26 123.2 230 36.5
TAR375G0412 Trochodendron aralioides HOM05D004124 ORTHO05D004779 1.5e-25 120.9 238 38.2
PSO782G3756 Papaver somniferum HOM05D004124 ORTHO05D004779 2.0e-25 120.6 232 36.6
TAR374G0532 Trochodendron aralioides HOM05D004124 ORTHO05D004779 2.6e-25 120.2 226 36.7
CDE06G1866 Ceratophyllum demersum HOM05D004124 ORTHO05D004779 7.7e-25 118.6 248 33.9
Aqoxy3G02746 Aquilegia oxysepala HOM05D004124 ORTHO05D004779 1.3e-24 117.9 235 36.2
arahy.Tifrunner.gnm1.ann1.4H3LGZ Arachis hypogaea HOM05D004124 ORTHO05D004779 1.3e-24 117.9 236 37.7
Phvul.008G046200 Phaseolus vulgaris HOM05D004124 ORTHO05D004779 6.5e-24 115.5 233 36.1
Cfa011079 Carpinus fangiana HOM05D002637 ORTHO05D008095 1.1e-23 114.8 258 32.9
Lj3g0004507 Lotus japonicus HOM05D004124 ORTHO05D004779 1.9e-23 114.0 234 37.6
BcaNung07398 Brassica carinata HOM05D004124 ORTHO05D004779 2.7e-22 110.2 53 94.3
Ca_14066_v3 Cicer arietinum L. HOM05D004124 ORTHO05D004779 3.0e-21 106.7 238 34.0
CDE06G1514 Ceratophyllum demersum HOM05D004124 ORTHO05D004779 1.1e-20 104.8 218 34.9
CBR_g53713 Chara braunii HOM05D004124 ORTHO05D004779 2.8e-19 100.1 258 33.7
Zm00001eb105300 Zea mays HOM05D004124 ORTHO05D004779 3.4e-17 93.2 245 31.8
Os07g0490600 Oryza sativa ssp. japonica HOM05D004124 ORTHO05D004779 4.5e-17 92.8 250 31.2
Glyma.09G242400 Glycine max HOM05D004124 ORTHO05D004779 6.5e-16 89.0 174 35.6
GSVIVG01018266001 Vitis vinifera HOM05D004124 ORTHO05D004779 6.5e-16 89.0 201 33.8
HanXRQChr12g0379451 Helianthus annuus HOM05D004124 ORTHO05D004779 8.5e-16 88.6 52 75.0
PGR083G1960 Punica granatum HOM05D000500 ORTHO05D000367 8.5e-16 88.6 56 71.4
Actinidia20714 Actinidia chinensis HOM05D004124 ORTHO05D004779 1.2e-14 84.7 39 92.3
AagrBONN_evm.TU.Sc2ySwM_368.334 Anthoceros agrestis HOM05D004124 ORTHO05D004779 1.2e-14 84.7 203 31.0
QL04p030567 Quercus lobata HOM05D004124 ORTHO05D004779 3.6e-14 83.2 170 35.3
CANSAT21G0875 Cannabis sativa HOM05D004124 ORTHO05D004779 1.5e-12 77.8 160 34.4
Psat7g021520 Pisum sativum HOM05D004124 ORTHO05D004779 7.4e-12 75.5 256 27.0
PSO063G6881 Papaver somniferum HOM05D004124 ORTHO05D004779 1.3e-11 74.7 173 34.1
Eucgr.L03169 Eucalyptus grandis HOM05D004124 ORTHO05D004779 4.8e-11 72.8 103 43.7
QL04p030562 Quercus lobata HOM05D004124 ORTHO05D000004 1.6e-09 67.8 51 56.9
ATR0057G076 Amborella trichopoda HOM05D004124 ORTHO05D004779 3.8e-08 63.2 51 51.0
Haze_02835 Corylus avellana HOM05D004124 ORTHO05D004779 3.8e-08 63.2 148 33.8
SMO181G0003 Selaginella moellendorffii HOM05D004124 ORTHO05D004779 1.9e-07 60.8 37 64.9
Zm00001eb321720 Zea mays HOM05D004124 ORTHO05D004779 9.4e-07 58.5 58 44.8


User provided reference genes

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