Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.11G246700 Glycine max HOM05D001304 ORTHO05D008890 2.4e-128 462.2 240 100.0
Phvul.001G258300 Phaseolus vulgaris HOM05D001304 ORTHO05D008890 3.0e-107 392.1 237 87.8
VMungo1383G0240 Vigna mungo HOM05D001304 ORTHO05D008890 1.5e-106 389.8 241 85.1
Dinv11009 Davidia involucrata HOM05D001304 ORTHO05D008890 7.5e-98 360.9 240 76.7
arahy.Tifrunner.gnm1.ann1.VHC2JK Arachis hypogaea HOM05D001304 ORTHO05D008890 2.8e-97 359.0 240 77.9
CsaV3_2G025190 Cucumis sativus L. HOM05D001304 ORTHO05D008890 3.7e-97 358.6 238 76.5
Haze_12318 Corylus avellana HOM05D001304 ORTHO05D008890 7.8e-95 350.9 240 75.0
Ca_16494_v3 Cicer arietinum L. HOM05D001304 ORTHO05D008890 1.0e-94 350.5 239 79.1
FvH4_4g24830 Fragaria vesca HOM05D001304 ORTHO05D008890 3.8e-94 348.6 241 73.4
Ciclev10032669m.g Citrus clementina HOM05D001304 ORTHO05D008890 6.6e-94 347.8 233 76.0
Sed0004969 Sechium edule HOM05D001304 ORTHO05D008890 8.6e-94 347.4 238 74.8
TWI36G0586 Tripterygium wilfordii HOM05D001304 ORTHO05D008890 8.6e-94 347.4 240 73.8
Manes.12G017100 Manihot esculenta HOM05D001304 ORTHO05D008890 1.9e-93 346.3 241 75.5
Eucgr.H04690 Eucalyptus grandis HOM05D001304 ORTHO05D008890 2.5e-93 345.9 243 74.5
PGR119G0865 Punica granatum HOM05D001304 ORTHO05D008890 3.3e-93 345.5 242 76.0
FAN12G0763 Fragaria x ananassa HOM05D001304 ORTHO05D008890 1.2e-92 343.6 238 72.7
COL.COLO4_23565 Corchorus olitorius HOM05D001304 ORTHO05D008890 1.6e-92 343.2 237 75.5
FAN22G1346 Fragaria x ananassa HOM05D001304 ORTHO05D008890 2.8e-92 342.4 238 72.7
FAN07G1515 Fragaria x ananassa HOM05D001304 ORTHO05D008890 3.6e-92 342.0 237 73.0
Prupe.1G237600 Prunus persica HOM05D001304 ORTHO05D008890 4.7e-92 341.7 243 72.8
RcHm_v2.0_Chr4g0431911 Rosa chinensis HOM05D001304 ORTHO05D008890 8.0e-92 340.9 242 72.7
FAN17G2678 Fragaria x ananassa HOM05D001304 ORTHO05D008890 1.4e-91 340.1 238 72.3
Potri.010G053600 Populus trichocarpa HOM05D001304 ORTHO05D008890 1.8e-91 339.7 238 74.4
Cfa009288 Carpinus fangiana HOM05D001304 ORTHO05D008890 6.8e-91 337.8 236 73.7
MSTRG.7966 Avicennia marina HOM05D001304 ORTHO05D008890 2.0e-90 336.3 229 74.7
TAR622G1249 Trochodendron aralioides HOM05D001304 ORTHO05D008890 4.4e-90 335.1 241 73.0
AT1G67700 Arabidopsis thaliana HOM05D001304 ORTHO05D008890 5.7e-90 334.7 236 73.3
MD13G1108600 Malus domestica HOM05D001304 ORTHO05D008890 2.2e-89 332.8 242 70.2
AL2G26400 Arabidopsis lyrata HOM05D001304 ORTHO05D008890 2.9e-89 332.4 236 72.9
BcaB03g15175 Brassica carinata HOM05D001304 ORTHO05D008890 3.7e-89 332.0 240 72.9
Carub.0002s1413 Capsella rubella HOM05D001304 ORTHO05D008890 3.7e-89 332.0 236 72.9
Thhalv10019020m.g Eutrema salsugineum HOM05D001304 ORTHO05D008890 3.7e-89 332.0 240 72.9
Sabra10G0017000 Salix brachista HOM05D001304 ORTHO05D008890 3.7e-89 332.0 227 74.0
BcaC08g46187 Brassica carinata HOM05D001304 ORTHO05D008890 6.4e-89 331.3 240 72.5
A07p32450 Brassica napus HOM05D001304 ORTHO05D008890 6.4e-89 331.3 236 74.2
BraA07t30869Z Brassica rapa HOM05D001304 ORTHO05D008890 6.4e-89 331.3 236 74.2
Oeu020321.1 Olea europaea HOM05D001304 ORTHO05D008890 8.3e-89 330.9 235 73.6
Gohir.D04G181000 Gossypium hirsutum HOM05D001304 ORTHO05D008890 1.8e-88 329.7 238 72.7
CARHR060290 Cardamine hirsuta HOM05D001304 ORTHO05D008890 3.2e-88 328.9 241 71.8
THA.LOC104825532 Tarenaya hassleriana HOM05D001304 ORTHO05D008890 5.4e-88 328.2 236 71.2
SalBow2G0118 Salvia bowleyana HOM05D001304 ORTHO05D008890 9.2e-88 327.4 233 71.2
SGA_v2.0_scaffold484G52361 Striga asiatica HOM05D001304 ORTHO05D008890 1.2e-87 327.0 237 71.3
C06p42370 Brassica napus HOM05D001304 ORTHO05D007800 1.6e-87 326.6 236 72.5
Cc11_g16390 Coffea canephora HOM05D001304 ORTHO05D008890 1.6e-87 326.6 239 69.9
Migut.K00680 Erythranthe guttata HOM05D001304 ORTHO05D008890 1.6e-87 326.6 249 69.1
BcaC08g46045 Brassica carinata HOM05D001304 ORTHO05D008890 2.7e-87 325.9 236 73.3
C06p38480 Brassica napus HOM05D001304 ORTHO05D008890 2.7e-87 325.9 236 73.3
Sp5g22690 Schrenkiella parvula HOM05D001304 ORTHO05D008890 3.5e-87 325.5 236 72.5
CANSAT01G0179 Cannabis sativa HOM05D001304 ORTHO05D008890 5.9e-87 324.7 240 71.7
Actinidia15135 Actinidia chinensis HOM05D001304 ORTHO05D008890 1.3e-86 323.6 241 71.8
Nitab4.5_0000041g0390 Nicotiana tabacum HOM05D001304 ORTHO05D008890 2.3e-86 322.8 239 72.8
Aa31LG4G12100 Aethionema arabicum HOM05D001304 ORTHO05D008890 6.6e-86 321.2 236 70.8
Aqoxy5G03572 Aquilegia oxysepala HOM05D001304 ORTHO05D008890 4.3e-85 318.5 240 67.9
CiPaw.05G174500 Carya illinoinensis HOM05D001304 ORTHO05D008890 4.3e-85 318.5 187 82.9
PGSC0003DMG400017453 Solanum tuberosum HOM05D001304 ORTHO05D008890 4.3e-85 318.5 240 71.7
Lj6g0017703 Lotus japonicus HOM05D001304 ORTHO05D008890 2.1e-84 316.2 244 73.0
Lalb_Chr08g0230761 Lupinus albus HOM05D001304 ORTHO05D008890 2.1e-84 316.2 241 69.3
AUR62005553 Chenopodium quinoa HOM05D001304 ORTHO05D008890 3.6e-84 315.5 237 70.5
AUR62024180 Chenopodium quinoa HOM05D001304 ORTHO05D008890 4.7e-84 315.1 236 68.6
EL10As2g23248 Beta vulgaris HOM05D001304 ORTHO05D008890 1.0e-83 313.9 232 69.0
Sopen05g009420 Solanum pennellii HOM05D001304 ORTHO05D008890 1.8e-83 313.2 240 68.8
Solyc05g014310.3 Solanum lycopersicum HOM05D001304 ORTHO05D008890 3.1e-83 312.4 237 68.8
Peaxi162Scf00128g00729 Petunia axillaris HOM05D001304 ORTHO05D008890 4.0e-83 312.0 228 72.8
Rhsim12G0107100 Rhododendron simsii HOM05D001304 ORTHO05D008890 4.0e-83 312.0 233 69.5
BolC6t39193H Brassica oleracea HOM05D001304 ORTHO05D007800 8.9e-83 310.8 265 64.5
unitig_8.g2912 Utricularia gibba HOM05D000468 ORTHO05D008890 3.4e-82 308.9 241 68.5
Duzib251G0230 Durio zibethinus HOM05D001304 ORTHO05D008890 7.5e-82 307.8 241 70.1
Thecc.02G270700 Theobroma cacao HOM05D001304 ORTHO05D008890 3.7e-81 305.4 241 68.9
Gohir.A04G137800 Gossypium hirsutum HOM05D001304 ORTHO05D008890 6.4e-81 304.7 238 68.5
PSO782G0777 Papaver somniferum HOM05D001304 ORTHO05D008890 2.4e-80 302.8 242 65.7
Atru.chr11.2216 Acer truncatum HOM05D001304 ORTHO05D008890 7.0e-80 301.2 206 75.7
PSO063G7645 Papaver somniferum HOM05D001304 ORTHO05D008890 1.2e-79 300.4 242 65.3
Sc04g0009800 Simmondsia chinensis HOM05D001304 ORTHO05D008890 1.6e-79 300.1 242 66.5
Ah.02g130500 Amaranthus hybridus HOM05D001304 ORTHO05D008890 7.8e-79 297.7 220 71.8
Nitab4.5_0001318g0090 Nicotiana tabacum HOM05D001304 ORTHO05D008890 3.9e-78 295.4 239 69.0
Gorai.012G174200 Gossypium raimondii HOM05D001304 ORTHO05D008890 5.0e-78 295.0 238 66.8
Hund06057 Selenicereus undatus HOM05D001304 ORTHO05D008890 9.5e-77 290.8 236 65.3
CDE02G1129 Ceratophyllum demersum HOM05D001304 ORTHO05D008890 1.8e-75 286.6 235 63.0
Lj6C819T3 Lonicera japonica HOM05D001304 ORTHO05D008890 8.9e-75 284.3 239 65.3
ATR0824G252 Amborella trichopoda HOM05D001304 ORTHO05D008890 2.0e-74 283.1 178 79.2
ECA233G5962 Erigeron canadensis HOM05D000468 ORTHO05D000548 8.3e-73 277.7 225 65.8
Cpa.g.c30628.2 Carica papaya HOM05D001304 ORTHO05D008890 1.4e-72 276.9 236 63.6
Medtr3g086040 Medicago truncatula HOM05D001304 ORTHO05D008890 1.9e-72 276.6 238 65.1
CDE09G0600 Ceratophyllum demersum HOM05D001304 ORTHO05D008890 3.2e-72 275.8 238 60.5
HanXRQChr08g0207321 Helianthus annuus HOM05D001304 ORTHO05D008890 7.3e-69 264.6 244 63.5
Actinidia24567 Actinidia chinensis HOM05D001304 ORTHO05D008890 8.9e-67 257.7 241 60.6
HPP92_004594 Vanilla planifolia HOM05D001304 ORTHO05D008890 8.9e-67 257.7 167 74.9
TPR.G33410 Trifolium pratense HOM05D001304 ORTHO05D008890 2.0e-66 256.5 225 62.2
CDE04G1632 Ceratophyllum demersum HOM05D001304 ORTHO05D008890 2.9e-65 252.7 235 54.0
Hma1.2p1_0079F.1_g041530 Hydrangea macrophylla HOM05D001304 ORTHO05D008890 3.2e-64 249.2 236 60.6
Lsat_1_v5_gn_8_150960 Lactuca sativa HOM05D001304 ORTHO05D008890 1.6e-63 246.9 243 59.3
Os02g0600200 Oryza sativa ssp. japonica HOM05D001304 ORTHO05D008890 3.3e-61 239.2 192 64.1
Zm00001eb246340 Zea mays HOM05D001304 ORTHO05D008890 9.6e-61 237.7 187 65.8
GSVIVG01010306001 Vitis vinifera HOM05D001304 ORTHO05D008890 2.8e-60 236.1 146 79.5
CSS0032412 Camellia sinensis var. sinensis HOM05D000063 ORTHO05D008721 5.2e-59 231.9 142 79.6
vmacro16148 Vaccinium macrocarpon HOM05D001304 ORTHO05D008890 1.7e-57 226.9 139 81.3
arahy.Tifrunner.gnm1.ann1.Q18UTF Arachis hypogaea HOM05D001304 ORTHO05D008890 3.8e-57 225.7 240 56.7
TAR629G1650 Trochodendron aralioides HOM05D001304 ORTHO05D008890 1.0e-54 217.6 139 76.3
MELO3C010716.2 Cucumis melo HOM05D001304 ORTHO05D008890 1.6e-52 210.3 143 74.1
BolC6t38945H Brassica oleracea HOM05D001304 ORTHO05D008890 4.2e-48 195.7 125 81.6
SEGI_40444 Sequoiadendron giganteum HOM05D001304 ORTHO05D008890 1.4e-43 180.6 193 48.7
Psat5g093920 Pisum sativum HOM05D001304 ORTHO05D008890 3.1e-43 179.5 95 87.4
Duzib248G0877 Durio zibethinus HOM05D001304 ORTHO05D008890 5.3e-43 178.7 229 50.7
AagrBONN_evm.TU.Sc2ySwM_368.469 Anthoceros agrestis HOM05D001304 ORTHO05D008890 2.6e-42 176.4 196 48.0
Pp3c14_9580 Physcomitrium patens HOM05D001304 ORTHO05D008890 2.6e-42 176.4 180 50.0
Cfa021197 Carpinus fangiana HOM05D001304 ORTHO05D008890 2.4e-40 169.9 140 67.1
Mapoly0101s0039 Marchantia polymorpha HOM05D001304 ORTHO05D008890 3.2e-40 169.5 185 47.0
DCAR_026486 Daucus carota HOM05D000468 ORTHO05D008890 1.5e-37 160.6 140 62.1
CBR_g28672 Chara braunii HOM05D001304 ORTHO05D008890 1.5e-34 150.6 179 44.1
SMO367G0665 Selaginella moellendorffii HOM05D001304 ORTHO05D008890 2.7e-31 139.8 160 45.6
MBI06_g05241_MAGBIO Magnolia biondii HOM05D001304 ORTHO05D008890 2.8e-28 129.8 244 41.0
ClCG08G017440 Citrullus lanatus HOM05D001304 ORTHO05D008890 1.4e-27 127.5 98 70.4
vmacro16147 Vaccinium macrocarpon HOM05D001304 ORTHO05D008890 4.1e-19 99.4 97 59.8
Oeu009356.1 Olea europaea HOM05D001304 ORTHO05D008890 6.9e-19 98.6 57 82.5
Ah.03g133980 Amaranthus hybridus HOM05D007778 ORTHO05D009819 5.7e-13 79.0 236 28.8
PRCOL_00000361 Prasinoderma coloniale HOM05D001304 ORTHO05D008890 1.8e-11 73.9 156 24.4
MCO01G115 Micromonas commoda HOM05D001304 ORTHO05D008890 5.9e-10 68.9 169 26.6


User provided reference genes

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