Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.11G218300 Glycine max HOM05D001966 ORTHO05D011119 4.8e-36 154.1 82 100.0
arahy.Tifrunner.gnm1.ann1.9XT8BN Arachis hypogaea HOM05D001966 ORTHO05D010127 1.3e-28 129.4 82 79.3
arahy.Tifrunner.gnm1.ann1.H5WC3R Arachis hypogaea HOM05D001966 ORTHO05D011119 1.3e-28 129.4 82 79.3
Cfa023003 Carpinus fangiana HOM05D001966 ORTHO05D011119 3.6e-28 127.9 82 78.0
CDE02G3054 Ceratophyllum demersum HOM05D001966 ORTHO05D011119 3.6e-28 127.9 82 78.0
Gohir.1Z049692 Gossypium hirsutum HOM05D001966 ORTHO05D011119 3.6e-28 127.9 82 78.0
Gohir.1Z050866 Gossypium hirsutum HOM05D001966 ORTHO05D011119 3.6e-28 127.9 82 78.0
arahy.Tifrunner.gnm1.ann1.2KV113 Arachis hypogaea HOM05D000580 ORTHO05D011119 1.1e-27 126.3 82 76.8
Gohir.A10G178000 Gossypium hirsutum HOM05D001966 ORTHO05D011119 1.1e-27 126.3 82 76.8
Gohir.A01G119800 Gossypium hirsutum HOM05D001966 ORTHO05D011119 3.1e-27 124.8 82 76.8
ScUNg0000270 Simmondsia chinensis HOM05D001966 ORTHO05D011119 3.1e-27 124.8 82 76.8
Gorai.007G237900 Gossypium raimondii HOM05D001966 ORTHO05D011119 6.9e-27 123.6 82 75.6
arahy.Tifrunner.gnm1.ann1.KT8FLV Arachis hypogaea HOM05D001966 ORTHO05D011119 1.2e-26 122.9 82 75.6
Sc05g0004140 Simmondsia chinensis HOM05D001966 ORTHO05D011119 1.2e-26 122.9 82 75.6
Potri.011G074067 Populus trichocarpa HOM05D001966 ORTHO05D011119 2.0e-26 122.1 82 75.6
Phvul.001G037800 Phaseolus vulgaris HOM05D001966 ORTHO05D011119 4.5e-26 120.9 82 74.4
Hma1.2p1_0051F.1_g029255 Hydrangea macrophylla HOM05D001966 ORTHO05D011119 5.8e-26 120.6 82 73.2
Sc05g0004050 Simmondsia chinensis HOM05D001966 ORTHO05D007227 1.3e-25 119.4 82 73.2
arahy.Tifrunner.gnm1.ann1.KXW2A6 Arachis hypogaea HOM05D001966 ORTHO05D011119 6.4e-25 117.1 78 76.9
arahy.Tifrunner.gnm1.ann1.1DF8CR Arachis hypogaea HOM05D001966 ORTHO05D011119 7.1e-24 113.6 75 77.3
SEGI_31611 Sequoiadendron giganteum HOM05D001966 ORTHO05D011119 9.3e-24 113.2 82 72.0
Oeu022559.1 Olea europaea HOM05D001966 ORTHO05D011119 4.6e-23 110.9 80 66.2
Gohir.D05G230250 Gossypium hirsutum HOM05D001966 ORTHO05D011119 7.9e-23 110.2 82 65.9
Gohir.A05G366050 Gossypium hirsutum HOM05D001966 ORTHO05D011119 8.7e-22 106.7 80 67.5
arahy.Tifrunner.gnm1.ann1.FF8QKQ Arachis hypogaea HOM05D001966 ORTHO05D011119 7.4e-21 103.6 85 67.1
Manes.13G063850 Manihot esculenta HOM05D001966 ORTHO05D011119 8.1e-20 100.1 82 63.4
VMungo0464G1082 Vigna mungo HOM05D006487 ORTHO05D007982 8.1e-20 100.1 68 76.5
BcaNung07086 Brassica carinata HOM05D001966 ORTHO05D011119 1.1e-19 99.8 69 73.9
Sopen09g027020 Solanum pennellii HOM05D001966 ORTHO05D011119 1.1e-19 99.8 69 73.9
Gohir.A04G110920 Gossypium hirsutum HOM05D001966 ORTHO05D011119 5.3e-19 97.4 82 59.8
Gohir.A04G110980 Gossypium hirsutum HOM05D001966 ORTHO05D011119 5.3e-19 97.4 82 59.8
SEGI_24666 Sequoiadendron giganteum HOM05D001966 ORTHO05D011119 2.0e-18 95.5 82 64.6
ECA246G3863 Erigeron canadensis HOM05D002697 ORTHO05D003087 4.5e-18 94.4 49 85.7
Nitab4.5_0003644g0040 Nicotiana tabacum HOM05D001966 ORTHO05D010127 1.7e-17 92.4 70 65.7
TPR.G40147 Trifolium pratense HOM05D003168 ORTHO05D011119 4.6e-15 84.3 82 54.9
Sopen02g002730 Solanum pennellii HOM05D004182 ORTHO05D007321 5.1e-14 80.9 69 63.8
arahy.Tifrunner.gnm1.ann1.CV40CV Arachis hypogaea HOM05D001966 ORTHO05D010127 1.9e-13 79.0 60 71.7
Sc09g0006250 Simmondsia chinensis HOM05D002578 ORTHO05D005154 5.7e-13 77.4 67 65.7
Nitab4.5_0000289g0040 Nicotiana tabacum HOM05D001966 ORTHO05D011119 2.1e-12 75.5 47 70.2
arahy.Tifrunner.gnm1.ann1.MHEL4J Arachis hypogaea HOM05D001966 ORTHO05D011119 8.2e-12 73.6 54 74.1
Gohir.D02G156751 Gossypium hirsutum HOM05D001966 ORTHO05D011119 8.2e-12 73.6 60 68.3
Gorai.005G175800 Gossypium raimondii HOM05D001966 ORTHO05D011119 1.4e-11 72.8 60 68.3
arahy.Tifrunner.gnm1.ann1.VLT00F Arachis hypogaea HOM05D001966 ORTHO05D011119 9.0e-11 70.1 54 70.4
Sc05g0009610 Simmondsia chinensis HOM05D001966 ORTHO05D011119 1.3e-09 66.2 52 69.2
Oeu012760.1 Olea europaea HOM05D001966 ORTHO05D010127 7.1e-08 60.5 60 58.3
Sopen04g018020 Solanum pennellii HOM05D001966 ORTHO05D011119 4.6e-07 57.8 54 63.0
Nitab4.5_0003550g0060 Nicotiana tabacum HOM05D001966 ORTHO05D011119 1.0e-06 56.6 23 91.3


User provided reference genes

Program Settings