Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.11G212500 Glycine max HOM05D006811 ORTHO05D008419 9.3e-245 849.7 419 100.0
Glyma.18G043800 Glycine max HOM05D006811 ORTHO05D008419 8.4e-230 800.0 417 94.0
VMungo0540G2025 Vigna mungo HOM05D006811 ORTHO05D008419 2.2e-209 732.3 401 88.5
Medtr3g064600 Medicago truncatula HOM05D006811 ORTHO05D008419 4.5e-191 671.4 404 80.4
Lj6g0026577 Lotus japonicus HOM05D006811 ORTHO05D008419 1.0e-190 670.2 409 80.2
Lalb_Chr15g0085211 Lupinus albus HOM05D006811 ORTHO05D008419 2.1e-188 662.5 408 78.4
TPR.G26689 Trifolium pratense HOM05D006811 ORTHO05D008419 8.0e-188 660.6 404 79.7
arahy.Tifrunner.gnm1.ann1.A3RENN Arachis hypogaea HOM05D006811 ORTHO05D008419 2.8e-185 652.1 408 78.2
Psat5g142440 Pisum sativum HOM05D006811 ORTHO05D008419 7.7e-183 644.0 405 78.0
Ca_17071_v3 Cicer arietinum L. HOM05D006811 ORTHO05D008419 9.8e-178 627.1 371 82.5
Phvul.006G087200 Phaseolus vulgaris HOM05D006811 ORTHO05D008419 5.6e-157 558.1 308 87.7
CiPaw.03G075800 Carya illinoinensis HOM05D006811 ORTHO05D008419 5.2e-155 551.6 413 66.6
MD17G1286700 Malus domestica HOM05D006811 ORTHO05D008419 6.8e-155 551.2 408 66.9
Dinv28246 Davidia involucrata HOM05D006811 ORTHO05D008419 5.8e-154 548.1 396 67.4
Peaxi162Scf00713g00019 Petunia axillaris HOM05D006811 ORTHO05D008419 5.8e-154 548.1 378 69.6
Actinidia40414 Actinidia chinensis HOM05D006811 ORTHO05D008419 9.8e-154 547.4 399 66.2
Cfa007746 Carpinus fangiana HOM05D006811 ORTHO05D008419 1.1e-152 543.9 401 66.1
PGSC0003DMG400016719 Solanum tuberosum HOM05D006811 ORTHO05D008419 4.1e-152 542.0 378 67.5
ClCG10G010680 Citrullus lanatus HOM05D006811 ORTHO05D008419 2.3e-150 536.2 391 65.5
FAN23G2849 Fragaria x ananassa HOM05D006811 ORTHO05D008419 3.0e-150 535.8 415 63.6
CsaV3_4G000630 Cucumis sativus L. HOM05D006811 ORTHO05D008419 3.9e-150 535.4 393 65.4
TAR622G1242 Trochodendron aralioides HOM05D006811 ORTHO05D008419 5.1e-150 535.0 401 65.6
Nn4g24731 Nelumbo nucifera HOM05D006811 ORTHO05D008419 8.6e-150 534.3 392 65.6
FvH4_1g27290 Fragaria vesca HOM05D006811 ORTHO05D008419 1.5e-149 533.5 399 66.2
Hma1.2p1_0158F.1_g069620 Hydrangea macrophylla HOM05D006811 ORTHO05D008419 2.5e-149 532.7 399 65.9
Sopen02g025910 Solanum pennellii HOM05D006811 ORTHO05D008419 2.5e-149 532.7 378 67.2
Rhsim10G0185300 Rhododendron simsii HOM05D006811 ORTHO05D008419 6.2e-148 528.1 396 63.9
RcHm_v2.0_Chr3g0488721 Rosa chinensis HOM05D006811 ORTHO05D008419 1.1e-147 527.3 399 64.4
Potri.017G139400 Populus trichocarpa HOM05D006811 ORTHO05D008419 1.8e-147 526.6 406 64.0
CANSAT54G1721 Cannabis sativa HOM05D006811 ORTHO05D008419 3.1e-147 525.8 373 67.6
Nitab4.5_0000483g0290 Nicotiana tabacum HOM05D006811 ORTHO05D008419 3.1e-147 525.8 392 65.3
Eucgr.F02911 Eucalyptus grandis HOM05D006811 ORTHO05D008419 3.4e-146 522.3 408 64.2
GSVIVG01035212001 Vitis vinifera HOM05D006811 ORTHO05D008419 1.3e-145 520.4 376 66.2
Sabra17G0117500 Salix brachista HOM05D006811 ORTHO05D008419 1.7e-145 520.0 389 66.3
Aqoxy3G04154 Aquilegia oxysepala HOM05D006811 ORTHO05D008419 8.4e-145 517.7 413 60.8
Aa31LG2G2700 Aethionema arabicum HOM05D006811 ORTHO05D008419 3.2e-144 515.8 383 64.5
Migut.K00747 Erythranthe guttata HOM05D006811 ORTHO05D008419 5.4e-144 515.0 400 62.2
Thecc.04G060000 Theobroma cacao HOM05D006811 ORTHO05D008419 5.4e-144 515.0 391 64.2
CSS0033706 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 1.2e-143 513.8 412 62.4
DCAR_020444 Daucus carota HOM05D006811 ORTHO05D008419 1.2e-143 513.8 407 63.1
SalBow5G0387 Salvia bowleyana HOM05D006811 ORTHO05D008419 1.0e-142 510.8 397 63.0
AL2G23270 Arabidopsis lyrata HOM05D006811 ORTHO05D008419 2.3e-142 509.6 415 61.9
Cc07_g12750 Coffea canephora HOM05D006811 ORTHO05D008419 3.9e-142 508.8 394 61.2
SalBow5G5201 Salvia bowleyana HOM05D006811 ORTHO05D008419 6.6e-142 508.1 397 62.5
AT1G65900 Arabidopsis thaliana HOM05D006811 ORTHO05D008419 3.3e-141 505.8 413 61.0
Sp5g20950 Schrenkiella parvula HOM05D006811 ORTHO05D008419 9.6e-141 504.2 414 61.4
Nitab4.5_0008137g0060 Nicotiana tabacum HOM05D006811 ORTHO05D008419 1.6e-140 503.4 434 58.8
Gorai.008G054100 Gossypium raimondii HOM05D006811 ORTHO05D008419 2.1e-140 503.1 407 60.7
Gohir.A12G052300 Gossypium hirsutum HOM05D006811 ORTHO05D008419 2.8e-140 502.7 407 60.7
Lsat_1_v5_gn_2_71780 Lactuca sativa HOM05D006811 ORTHO05D008419 1.1e-139 500.7 391 61.9
Carub.0002s1184 Capsella rubella HOM05D006811 ORTHO05D008419 1.4e-139 500.4 415 60.5
Hund22201 Selenicereus undatus HOM05D006811 ORTHO05D008419 1.4e-139 500.4 403 61.8
MSTRG.15636 Avicennia marina HOM05D006811 ORTHO05D008419 1.8e-139 500.0 406 59.6
Thhalv10018647m.g Eutrema salsugineum HOM05D006811 ORTHO05D008419 3.1e-139 499.2 413 61.5
CARHR057790 Cardamine hirsuta HOM05D006811 ORTHO05D008419 3.4e-138 495.7 388 63.1
Ciclev10013413m.g Citrus clementina HOM05D006811 ORTHO05D008419 2.7e-135 486.1 405 60.5
HanXRQChr14g0443391 Helianthus annuus HOM05D006811 ORTHO05D008419 4.6e-135 485.3 375 61.1
Sc06g0003070 Simmondsia chinensis HOM05D006811 ORTHO05D008419 5.1e-134 481.9 401 59.6
PSO063G4300 Papaver somniferum HOM05D006811 ORTHO05D008419 1.9e-133 479.9 422 57.3
BcaB03g15309 Brassica carinata HOM05D006811 ORTHO05D008419 2.5e-133 479.6 382 62.8
C06p39240 Brassica napus HOM05D006811 ORTHO05D008419 3.3e-133 479.2 412 60.2
A07p33010 Brassica napus HOM05D006811 ORTHO05D008419 1.6e-132 476.9 412 60.0
BraA07t30929Z Brassica rapa HOM05D006811 ORTHO05D008419 1.6e-132 476.9 412 60.0
BcaC08g46096 Brassica carinata HOM05D006811 ORTHO05D008419 2.8e-132 476.1 385 63.1
HanXRQChr12g0365711 Helianthus annuus HOM05D006811 ORTHO05D008419 1.8e-131 473.4 398 57.8
EL10Ac4g08932 Beta vulgaris HOM05D006811 ORTHO05D008419 2.0e-130 469.9 400 58.2
QL02p064229 Quercus lobata HOM05D006811 ORTHO05D008419 2.0e-130 469.9 445 54.4
PGR004G2199 Punica granatum HOM05D006811 ORTHO05D008419 3.4e-130 469.2 379 62.0
THA.LOC104825578 Tarenaya hassleriana HOM05D006811 ORTHO05D008419 3.4e-130 469.2 368 62.2
ATR0807G007 Amborella trichopoda HOM05D006811 ORTHO05D008419 5.8e-130 468.4 370 61.9
BolC6t39018H Brassica oleracea HOM05D006811 ORTHO05D008419 6.4e-129 464.9 449 55.7
CDE05G3344 Ceratophyllum demersum HOM05D006811 ORTHO05D008419 1.1e-128 464.2 380 58.9
FAN26G0959 Fragaria x ananassa HOM05D006811 ORTHO05D008419 3.2e-128 462.6 400 58.5
unitig_0.g2638 Utricularia gibba HOM05D006811 ORTHO05D008419 1.6e-127 460.3 405 55.6
Duzib138G1484 Durio zibethinus HOM05D006811 ORTHO05D008419 6.7e-126 454.9 413 56.9
TWI53G0648 Tripterygium wilfordii HOM05D006811 ORTHO05D008419 7.4e-125 451.4 333 64.3
Lj4A251G58 Lonicera japonica HOM05D006811 ORTHO05D008419 1.1e-120 437.6 436 53.2
Manes.02G081300 Manihot esculenta HOM05D006811 ORTHO05D008419 5.1e-118 428.7 311 66.6
FAN28G2567 Fragaria x ananassa HOM05D006811 ORTHO05D008419 3.7e-116 422.5 295 66.8
vmacro20465 Vaccinium macrocarpon HOM05D006811 ORTHO05D008419 8.2e-116 421.4 377 57.6
AUR62003402 Chenopodium quinoa HOM05D006811 ORTHO05D008419 4.0e-115 419.1 400 54.5
AUR62004775 Chenopodium quinoa HOM05D006811 ORTHO05D008419 5.3e-115 418.7 376 56.1
ECA238G0794 Erigeron canadensis HOM05D006811 ORTHO05D008419 1.6e-111 407.1 417 50.1
Sed0027023 Sechium edule HOM05D006811 ORTHO05D008419 3.3e-109 399.4 305 62.0
Atru.chr1.2130 Acer truncatum HOM05D006811 ORTHO05D008419 6.9e-107 391.7 287 63.1
SGA_v2.0_scaffold115G32048 Striga asiatica HOM05D006811 ORTHO05D008419 5.1e-102 375.6 284 61.3
HPP92_014601 Vanilla planifolia HOM05D006811 ORTHO05D008419 2.7e-95 353.2 296 55.1
Haze_14327 Corylus avellana HOM05D006811 ORTHO05D008419 1.7e-92 344.0 293 59.4
Prupe.3G014300 Prunus persica HOM05D006811 ORTHO05D008419 2.8e-84 316.6 238 64.3
Zm00001eb001500 Zea mays HOM05D006811 ORTHO05D008419 2.4e-83 313.5 271 57.2
MELO3C017973.2 Cucumis melo HOM05D006811 ORTHO05D008419 2.9e-81 306.6 239 63.6
Ah.06g191630 Amaranthus hybridus HOM05D006811 ORTHO05D008419 2.5e-80 303.5 393 43.3
arahy.Tifrunner.gnm1.ann1.JYBV0C Arachis hypogaea HOM05D006811 ORTHO05D008419 2.6e-77 293.5 186 78.5
Gohir.D12G050800 Gossypium hirsutum HOM05D006811 ORTHO05D008419 3.3e-77 293.1 253 60.5
Cpa.g.sc178.33 Carica papaya HOM05D006811 ORTHO05D008419 1.3e-73 281.2 281 54.4
DCAR_017976 Daucus carota HOM05D006811 ORTHO05D008419 1.9e-64 250.8 217 57.6
AagrBONN_evm.TU.Sc2ySwM_368.3231 Anthoceros agrestis HOM05D006811 ORTHO05D008419 1.0e-62 245.0 374 37.2
PSO782G1785 Papaver somniferum HOM05D006811 ORTHO05D008419 7.0e-59 232.3 201 57.7
CSS0020523 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 7.5e-53 212.2 158 63.9
CBR_g31433 Chara braunii HOM05D006811 ORTHO05D008419 5.8e-45 186.0 390 34.4
FAN19G2462 Fragaria x ananassa HOM05D006811 ORTHO05D008419 1.9e-43 181.0 157 54.8
Medtr3g073800 Medicago truncatula HOM05D006811 ORTHO05D008419 1.9e-40 171.0 99 82.8
CSS0043986 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 5.8e-37 159.5 148 54.7
HPP92_014605 Vanilla planifolia HOM05D006811 ORTHO05D008419 7.1e-35 152.5 135 51.1
FAN28G1678 Fragaria x ananassa HOM05D006811 ORTHO05D008419 1.5e-29 134.8 108 65.7
Os03g0120000 Oryza sativa ssp. japonica HOM05D006811 ORTHO05D008419 3.3e-24 117.1 83 67.5
Cre02.g081050 Chlamydomonas reinhardtii HOM05D006811 ORTHO05D008419 1.2e-21 108.6 360 28.3
FAN28G2576 Fragaria x ananassa HOM05D006811 ORTHO05D008419 1.3e-20 105.1 74 64.9
MCO05G199 Micromonas commoda HOM05D006811 ORTHO05D008419 4.9e-20 103.2 390 28.2
arahy.Tifrunner.gnm1.ann1.XFK461 Arachis hypogaea HOM05D006811 ORTHO05D008419 1.2e-18 98.6 74 68.9
PRCOL_00005605 Prasinoderma coloniale HOM05D006811 ORTHO05D008419 1.6e-18 98.2 382 25.7
Aa31LG2G2690 Aethionema arabicum HOM05D000356 ORTHO05D000265 1.3e-17 95.1 75 57.3
PRCOL_00004838 Prasinoderma coloniale HOM05D006811 ORTHO05D008419 6.6e-17 92.8 433 24.9
Oeu032292.1 Olea europaea HOM05D006811 ORTHO05D008419 1.1e-11 75.5 77 51.9
A02p12460 Brassica napus HOM05D006811 ORTHO05D008419 2.4e-11 74.3 66 57.6
SEGI_18554 Sequoiadendron giganteum HOM05D006811 ORTHO05D008419 6.0e-10 69.7 71 42.3
SEGI_23786 Sequoiadendron giganteum HOM05D006811 ORTHO05D008419 5.1e-09 66.6 77 46.8
COL.COLO4_03698 Corchorus olitorius HOM05D006811 ORTHO05D008419 6.7e-09 66.2 68 45.6


User provided reference genes

Program Settings