Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.11G210008 Glycine max HOM05D010448 ORTHO05D012537 2.7e-227 791.6 373 100.0
Glyma.18G044800 Glycine max HOM05D010448 ORTHO05D012537 7.9e-187 657.1 373 83.9
Phvul.006G086200 Phaseolus vulgaris HOM05D010448 ORTHO05D012537 8.2e-144 514.2 375 66.7
VMungo0540G1047 Vigna mungo HOM05D010448 ORTHO05D012537 6.7e-138 494.6 374 65.2
Lj6g0025570 Lotus japonicus HOM05D010448 ORTHO05D012537 1.1e-135 487.3 384 61.7
Lalb_Chr18g0053761 Lupinus albus HOM05D010448 ORTHO05D012537 4.2e-132 475.3 375 61.3
Medtr3g064460 Medicago truncatula HOM05D010448 ORTHO05D012537 6.1e-123 444.9 364 60.7
arahy.Tifrunner.gnm1.ann1.4R5R47 Arachis hypogaea HOM05D010448 ORTHO05D012537 1.3e-120 437.2 373 59.5
TPR.G18483 Trifolium pratense HOM05D010448 ORTHO05D012537 1.0e-109 401.0 348 59.8
Psat5g142640 Pisum sativum HOM05D010448 ORTHO05D012537 8.6e-109 397.9 380 52.6
Potri.001G146000 Populus trichocarpa HOM05D010448 ORTHO05D012537 5.8e-89 332.0 363 45.2
Potri.001G181000 Populus trichocarpa HOM05D010448 ORTHO05D012537 2.9e-88 329.7 365 44.9
Sabra01G0146000 Salix brachista HOM05D010448 ORTHO05D012537 8.1e-83 311.6 363 43.5
Sabra01G0114700 Salix brachista HOM05D010448 ORTHO05D012537 1.5e-81 307.4 360 43.6
Manes.18G108700 Manihot esculenta HOM05D010448 ORTHO05D012537 2.6e-81 306.6 327 45.9
Atru.chr6.2743 Acer truncatum HOM05D010448 ORTHO05D012537 2.8e-67 260.0 351 39.0
Ciclev10015844m.g Citrus clementina HOM05D010448 ORTHO05D012537 9.0e-58 228.4 343 36.4
Eucgr.G01906 Eucalyptus grandis HOM05D010448 ORTHO05D012537 1.5e-57 227.6 398 34.4
Atru.chr13.2066 Acer truncatum HOM05D010448 ORTHO05D012537 6.5e-16 89.4 113 38.9
SGA_v2.0_scaffold136G35021 Striga asiatica HOM05D000664 ORTHO05D000491 4.2e-15 86.7 280 28.2
COL.COLO4_26298 Corchorus olitorius HOM05D015450 ORTHO05D017757 2.8e-11 73.9 236 27.5
Sabra08G0010200 Salix brachista HOM05D008040 ORTHO05D010075 1.1e-10 72.0 263 27.0
Ciclev10006867m.g Citrus clementina HOM05D000664 ORTHO05D000491 1.4e-10 71.6 183 29.5
COL.COLO4_34020 Corchorus olitorius HOM05D001729 ORTHO05D001155 1.4e-10 71.6 272 24.6
Cc02_g04650 Coffea canephora HOM05D000664 ORTHO05D000491 2.7e-09 67.4 286 23.8
Sopen03g029280 Solanum pennellii HOM05D002420 ORTHO05D002422 5.9e-09 66.2 348 22.1
TAR625G1137 Trochodendron aralioides HOM05D001729 ORTHO05D001155 3.8e-08 63.5 300 26.0
Rhsim03G0162000 Rhododendron simsii HOM05D000664 ORTHO05D000491 1.5e-07 61.6 327 23.5
Haze_19047 Corylus avellana HOM05D000664 ORTHO05D000491 1.9e-07 61.2 319 23.2
Rhsim03G0162100 Rhododendron simsii HOM05D000664 ORTHO05D000491 3.3e-07 60.5 291 24.4
Sabra09G0127200 Salix brachista HOM05D001729 ORTHO05D001155 3.3e-07 60.5 152 29.6
Duzib170G0599 Durio zibethinus HOM05D001729 ORTHO05D001155 2.1e-06 57.8 123 29.3
Gorai.006G112800 Gossypium raimondii HOM05D001729 ORTHO05D001155 6.1e-06 56.2 324 22.5


User provided reference genes

Program Settings