Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.11G195100 Glycine max HOM05D007330 ORTHO05D009368 2.5e-90 335.5 175 100.0
Glyma.12G079000 Glycine max HOM05D007330 ORTHO05D009368 1.1e-63 246.9 175 78.9
VMungo1127G0312 Vigna mungo HOM05D007330 ORTHO05D009368 7.5e-55 217.6 135 85.9
Lj3g0015691 Lotus japonicus HOM05D007330 ORTHO05D009368 4.2e-50 201.8 173 67.1
Ca_19301_v3 Cicer arietinum L. HOM05D007330 ORTHO05D009368 5.5e-50 201.4 127 83.5
Lalb_Chr19g0137021 Lupinus albus HOM05D007330 ORTHO05D009368 1.2e-47 193.7 130 79.2
Manes.11G150100 Manihot esculenta HOM05D007330 ORTHO05D009368 2.0e-47 193.0 128 76.6
Ciclev10029423m.g Citrus clementina HOM05D007330 ORTHO05D009368 3.7e-46 188.7 127 75.6
Thecc.09G347600 Theobroma cacao HOM05D007330 ORTHO05D009368 8.3e-46 187.6 145 67.6
Potri.009G008400 Populus trichocarpa HOM05D007330 ORTHO05D009368 1.1e-45 187.2 129 74.4
Medtr4g057845 Medicago truncatula HOM05D007330 ORTHO05D009368 4.1e-45 185.3 127 76.4
vmacro03274 Vaccinium macrocarpon HOM05D007330 ORTHO05D009368 4.1e-45 185.3 128 74.2
CiPaw.13G117900 Carya illinoinensis HOM05D007330 ORTHO05D009368 2.0e-44 183.0 129 73.6
Rhsim13G0098500 Rhododendron simsii HOM05D007330 ORTHO05D009368 2.0e-44 183.0 128 73.4
Dinv34698 Davidia involucrata HOM05D007330 ORTHO05D009368 4.5e-44 181.8 120 75.0
Psat4g155560 Pisum sativum HOM05D007330 ORTHO05D009368 4.5e-44 181.8 134 75.4
arahy.Tifrunner.gnm1.ann1.V5GM9G Arachis hypogaea HOM05D007330 ORTHO05D009368 3.8e-43 178.7 142 71.8
CSS0040476 Camellia sinensis var. sinensis HOM05D007330 ORTHO05D009368 6.6e-43 177.9 126 71.4
TAR636G1893 Trochodendron aralioides HOM05D007330 ORTHO05D009368 6.6e-43 177.9 126 73.8
arahy.Tifrunner.gnm1.ann1.PP0PHB Arachis hypogaea HOM05D007330 ORTHO05D009368 1.1e-42 177.2 137 72.3
COL.COLO4_34706 Corchorus olitorius HOM05D007330 ORTHO05D009368 1.5e-42 176.8 126 73.0
FvH4_3g31190 Fragaria vesca HOM05D007330 ORTHO05D009368 1.5e-42 176.8 131 67.9
FAN11G3216 Fragaria x ananassa HOM05D007330 ORTHO05D009368 1.5e-42 176.8 131 67.9
Gohir.A05G106300 Gossypium hirsutum HOM05D007330 ORTHO05D009368 1.5e-42 176.8 120 73.3
PGR119G1592 Punica granatum HOM05D007330 ORTHO05D009368 1.5e-42 176.8 122 73.0
Gohir.D05G106300 Gossypium hirsutum HOM05D007330 ORTHO05D009368 1.9e-42 176.4 120 73.3
RcHm_v2.0_Chr5g0057841 Rosa chinensis HOM05D007330 ORTHO05D009368 2.5e-42 176.0 126 70.6
FAN25G0306 Fragaria x ananassa HOM05D007330 ORTHO05D009368 4.2e-42 175.3 131 67.2
CANSAT35G1795 Cannabis sativa HOM05D007330 ORTHO05D009368 5.6e-42 174.9 133 69.9
GSVIVG01031517001 Vitis vinifera HOM05D000070 ORTHO05D001255 5.6e-42 174.9 130 71.5
MSTRG.18683 Avicennia marina HOM05D007330 ORTHO05D009368 7.2e-42 174.5 126 69.8
MELO3C004968.2 Cucumis melo HOM05D007330 ORTHO05D009368 7.2e-42 174.5 127 71.7
CsaV3_1G013380 Cucumis sativus L. HOM05D007330 ORTHO05D009368 7.2e-42 174.5 173 58.4
Atru.chr3.3558 Acer truncatum HOM05D007330 ORTHO05D009368 1.2e-41 173.7 120 72.5
ClCG03G002650 Citrullus lanatus HOM05D007330 ORTHO05D009368 1.2e-41 173.7 127 71.7
THA.LOC104814822 Tarenaya hassleriana HOM05D007330 ORTHO05D009368 1.2e-41 173.7 121 72.7
FAN21G2017 Fragaria x ananassa HOM05D007330 ORTHO05D009368 2.8e-41 172.6 158 58.2
Nn2g13766 Nelumbo nucifera HOM05D007330 ORTHO05D009368 2.8e-41 172.6 126 72.2
QL01p015978 Quercus lobata HOM05D007330 ORTHO05D009368 2.8e-41 172.6 127 71.7
Phvul.011G083600 Phaseolus vulgaris HOM05D007330 ORTHO05D009368 6.1e-41 171.4 95 90.5
Sed0025524 Sechium edule HOM05D007330 ORTHO05D009368 1.0e-40 170.6 120 71.7
Cc01_g10610 Coffea canephora HOM05D007330 ORTHO05D009368 5.2e-40 168.3 143 62.9
Aa31LG4G14100 Aethionema arabicum HOM05D007330 ORTHO05D009368 8.9e-40 167.5 124 71.0
BcaC09g49699 Brassica carinata HOM05D007330 ORTHO05D009368 8.9e-40 167.5 119 73.9
C01p33810 Brassica napus HOM05D007330 ORTHO05D009368 8.9e-40 167.5 119 73.9
BolC1t03342H Brassica oleracea HOM05D007330 ORTHO05D009368 8.9e-40 167.5 119 73.9
DCAR_018785 Daucus carota HOM05D007330 ORTHO05D009368 8.9e-40 167.5 118 72.9
A01p26570 Brassica napus HOM05D007330 ORTHO05D009368 1.5e-39 166.8 140 64.3
BraA01t02587Z Brassica rapa HOM05D007330 ORTHO05D009368 1.5e-39 166.8 140 64.3
Eucgr.J00897 Eucalyptus grandis HOM05D007330 ORTHO05D009368 1.5e-39 166.8 126 69.0
Migut.N02576 Erythranthe guttata HOM05D007330 ORTHO05D009368 2.0e-39 166.4 126 64.3
Ah.01g003130 Amaranthus hybridus HOM05D007330 ORTHO05D009368 3.4e-39 165.6 126 68.3
Thhalv10002688m.g Eutrema salsugineum HOM05D007330 ORTHO05D009368 3.4e-39 165.6 118 73.7
TWI31G1101 Tripterygium wilfordii HOM05D007330 ORTHO05D009368 3.4e-39 165.6 126 68.3
Sopen04g002470 Solanum pennellii HOM05D007330 ORTHO05D009368 4.4e-39 165.2 119 68.1
Hma1.2p1_0569F.1_g180250 Hydrangea macrophylla HOM05D007330 ORTHO05D009368 5.7e-39 164.9 118 69.5
BcaB05g23421 Brassica carinata HOM05D007330 ORTHO05D009368 7.5e-39 164.5 119 72.3
CARHR150920 Cardamine hirsuta HOM05D007330 ORTHO05D009368 7.5e-39 164.5 127 69.3
Nitab4.5_0000567g0040 Nicotiana tabacum HOM05D007330 ORTHO05D009368 9.8e-39 164.1 118 68.6
CAN.G1577.6 Capsicum annuum HOM05D007330 ORTHO05D009368 2.9e-38 162.5 128 64.8
Solyc04g007410.4 Solanum lycopersicum HOM05D007330 ORTHO05D009368 2.9e-38 162.5 119 67.2
Sp5g16210 Schrenkiella parvula HOM05D007330 ORTHO05D009368 6.4e-38 161.4 121 71.1
AT3G45050 Arabidopsis thaliana HOM05D007330 ORTHO05D009368 1.1e-37 160.6 129 69.0
Lsat_1_v5_gn_1_63180 Lactuca sativa HOM05D007330 ORTHO05D009368 3.2e-37 159.1 117 70.1
ECA248G2053 Erigeron canadensis HOM05D007330 ORTHO05D009368 9.2e-37 157.5 115 70.4
Carub.0005s1083 Capsella rubella HOM05D007330 ORTHO05D009368 1.2e-36 157.1 120 70.8
Actinidia07167 Actinidia chinensis HOM05D007330 ORTHO05D009368 2.7e-36 156.0 128 64.1
HanXRQChr11g0346411 Helianthus annuus HOM05D007330 ORTHO05D009368 3.5e-36 155.6 143 62.2
SGA_v2.0_scaffold116G32214 Striga asiatica HOM05D007330 ORTHO05D009368 3.5e-36 155.6 102 72.5
Sc15g0001620 Simmondsia chinensis HOM05D007330 ORTHO05D009368 2.3e-35 152.9 144 58.3
PSO339G1528 Papaver somniferum HOM05D007330 ORTHO05D009368 6.6e-35 151.4 150 56.7
MD11G1142300 Malus domestica HOM05D007330 ORTHO05D009368 8.6e-35 151.0 134 61.9
Peaxi162Scf00064g00193 Petunia axillaris HOM05D007330 ORTHO05D009368 1.9e-34 149.8 115 66.1
MBI18_g25263_MAGBIO Magnolia biondii HOM05D007330 ORTHO05D009368 2.5e-34 149.4 150 55.3
CDE09G0261 Ceratophyllum demersum HOM05D007330 ORTHO05D008128 2.1e-33 146.4 121 60.3
AUR62022766 Chenopodium quinoa HOM05D007330 ORTHO05D009368 8.9e-32 141.0 126 59.5
AL5G23540 Arabidopsis lyrata HOM05D007330 ORTHO05D009368 2.9e-30 136.0 120 63.3
Peaxi162Scf00597g00033 Petunia axillaris HOM05D007330 ORTHO05D009368 3.7e-30 135.6 108 65.7
Prupe.6G107600 Prunus persica HOM05D007330 ORTHO05D009368 1.1e-29 134.0 110 65.5
PSO801G0259 Papaver somniferum HOM05D007330 ORTHO05D009368 1.9e-29 133.3 131 55.7
Cpa.g.sc65.31 Carica papaya HOM05D007330 ORTHO05D009368 3.0e-27 125.9 95 69.5
Sabra09G0004900 Salix brachista HOM05D007330 ORTHO05D009368 3.0e-27 125.9 101 65.3
Gorai.009G110400 Gossypium raimondii HOM05D007330 ORTHO05D009368 8.6e-27 124.4 94 67.0
PGSC0003DMG400005973 Solanum tuberosum HOM05D007330 ORTHO05D009368 1.6e-25 120.2 92 67.4
Lj1A195G28 Lonicera japonica HOM05D007330 ORTHO05D009368 3.6e-25 119.0 118 57.6
Lj1C194T4 Lonicera japonica HOM05D007330 ORTHO05D009368 8.1e-25 117.9 91 68.1
Nitab4.5_0003325g0010 Nicotiana tabacum HOM05D007330 ORTHO05D009368 1.8e-24 116.7 87 69.0
HPP92_007165 Vanilla planifolia HOM05D007330 ORTHO05D009368 8.9e-24 114.4 119 52.9
Peaxi162Scf00958g00023 Petunia axillaris HOM05D007330 ORTHO05D009368 2.6e-23 112.8 92 67.4
SEGI_17989 Sequoiadendron giganteum HOM05D007330 ORTHO05D009368 4.4e-23 112.1 98 56.1
Aqoxy2G01788 Aquilegia oxysepala HOM05D007330 ORTHO05D009368 1.7e-22 110.2 100 62.0
Os06g0731300 Oryza sativa ssp. japonica HOM05D007330 ORTHO05D009368 3.2e-21 105.9 71 62.0
AagrBONN_evm.TU.Sc2ySwM_228.4164 Anthoceros agrestis HOM05D007330 ORTHO05D009368 4.1e-21 105.5 113 51.3
Hund08155 Selenicereus undatus HOM05D007330 ORTHO05D009368 4.1e-21 105.5 95 58.9
Pp3c18_13360 Physcomitrium patens HOM05D007330 ORTHO05D009368 9.2e-21 104.4 116 47.4
CBR_g54316 Chara braunii HOM05D007330 ORTHO05D009368 9.5e-18 94.4 115 43.5
Haze_23760 Corylus avellana HOM05D007330 ORTHO05D009368 2.8e-17 92.8 155 40.6
MD03G1125100 Malus domestica HOM05D007330 ORTHO05D009368 2.6e-15 86.3 128 45.3
arahy.Tifrunner.gnm1.ann1.N36MJA Arachis hypogaea HOM05D007330 ORTHO05D009368 4.9e-14 82.0 64 65.6
AUR62029217 Chenopodium quinoa HOM05D007330 ORTHO05D009368 8.4e-14 81.3 116 46.6
Mapoly0184s0021 Marchantia polymorpha HOM05D007330 ORTHO05D009368 1.1e-13 80.9 118 41.5
SMO275G0064 Selaginella moellendorffii HOM05D007330 ORTHO05D009368 4.6e-12 75.5 117 39.3
SMO367G0878 Selaginella moellendorffii HOM05D007330 ORTHO05D009368 7.8e-12 74.7 117 39.3
EL10Ac9g22568 Beta vulgaris HOM05D007330 ORTHO05D009368 2.1e-09 66.6 124 39.5
Oeu013536.1 Olea europaea HOM05D000070 ORTHO05D001255 2.4e-08 63.2 133 36.1
Actinidia24129 Actinidia chinensis HOM05D000070 ORTHO05D001255 1.3e-06 57.4 70 51.4


User provided reference genes

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