Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.11G188500 Glycine max HOM05D007994 ORTHO05D010092 6.6e-159 563.9 271 100.0
Phvul.011G091200 Phaseolus vulgaris HOM05D007994 ORTHO05D010092 2.3e-119 432.6 271 79.3
Lalb_Chr19g0136731 Lupinus albus HOM05D007994 ORTHO05D010092 6.1e-96 354.8 273 65.9
Lj3g0008283 Lotus japonicus HOM05D007994 ORTHO05D010092 4.8e-93 345.1 271 65.7
VMungo1080G0008 Vigna mungo HOM05D007994 ORTHO05D010092 2.2e-77 293.1 284 53.9
Cfa010076 Carpinus fangiana HOM05D007994 ORTHO05D010092 1.4e-63 247.3 265 49.8
Thecc.09G290600 Theobroma cacao HOM05D007994 ORTHO05D010092 1.4e-63 247.3 261 49.0
Dinv12515 Davidia involucrata HOM05D007994 ORTHO05D010092 5.2e-63 245.4 267 48.7
Duzib168G2077 Durio zibethinus HOM05D007994 ORTHO05D010092 8.8e-63 244.6 270 48.5
Duzib170G0069 Durio zibethinus HOM05D007994 ORTHO05D010092 4.4e-62 242.3 269 47.6
Manes.11G158100 Manihot esculenta HOM05D007994 ORTHO05D010092 1.8e-60 236.9 262 49.2
Sabra09G0116600 Salix brachista HOM05D007994 ORTHO05D010092 1.2e-59 234.2 255 48.2
Potri.009G148200 Populus trichocarpa HOM05D007994 ORTHO05D010092 2.0e-59 233.4 254 49.6
Cc01_g09740 Coffea canephora HOM05D007994 ORTHO05D010092 4.5e-59 232.3 260 46.5
Haze_23442 Corylus avellana HOM05D007994 ORTHO05D010092 1.7e-58 230.3 241 51.5
COL.COLO4_19306 Corchorus olitorius HOM05D007994 ORTHO05D010092 2.3e-58 229.9 267 47.6
TAR623G0693 Trochodendron aralioides HOM05D007994 ORTHO05D010092 3.8e-58 229.2 259 47.5
Gohir.A09G093700 Gossypium hirsutum HOM05D007994 ORTHO05D010092 6.1e-56 221.9 269 45.0
TWI75G1300 Tripterygium wilfordii HOM05D007994 ORTHO05D010092 1.0e-55 221.1 261 45.6
QL01p013577 Quercus lobata HOM05D007994 ORTHO05D010092 2.0e-54 216.9 210 52.9
CiPaw.13G140400 Carya illinoinensis HOM05D007994 ORTHO05D010092 3.4e-54 216.1 263 45.6
Gorai.006G110000 Gossypium raimondii HOM05D007994 ORTHO05D010092 1.7e-53 213.8 267 43.8
Aqoxy4G02880 Aquilegia oxysepala HOM05D007994 ORTHO05D010092 4.1e-52 209.1 248 45.2
Gohir.D09G093400 Gossypium hirsutum HOM05D007994 ORTHO05D010092 1.6e-51 207.2 269 43.1
MELO3C004786.2 Cucumis melo HOM05D007994 ORTHO05D010092 2.9e-50 203.0 251 44.6
CsaV3_1G014550 Cucumis sativus L. HOM05D007994 ORTHO05D010092 5.0e-50 202.2 270 43.3
ClCG01G012620 Citrullus lanatus HOM05D007994 ORTHO05D010092 1.5e-49 200.7 266 44.4
Atru.chr3.3364 Acer truncatum HOM05D007994 ORTHO05D010092 4.3e-49 199.1 257 45.5
VMungo1127G0625 Vigna mungo HOM05D007994 ORTHO05D010092 1.6e-48 197.2 108 79.6
MSTRG.12356 Avicennia marina HOM05D007994 ORTHO05D010092 1.0e-47 194.5 265 40.8
THA.LOC104814803 Tarenaya hassleriana HOM05D007994 ORTHO05D010092 1.4e-47 194.1 255 45.1
Sed0020093 Sechium edule HOM05D007994 ORTHO05D010092 7.5e-46 188.3 263 43.0
Prupe.6G120200 Prunus persica HOM05D007994 ORTHO05D010092 2.2e-45 186.8 269 45.0
PSO384G4503 Papaver somniferum HOM05D007994 ORTHO05D010092 4.6e-43 179.1 248 40.7
MD03G1135900 Malus domestica HOM05D007994 ORTHO05D010092 1.7e-42 177.2 261 44.1
CANSAT54G1189 Cannabis sativa HOM05D007994 ORTHO05D010092 1.5e-41 174.1 268 40.3
RcHm_v2.0_Chr5g0054991 Rosa chinensis HOM05D007994 ORTHO05D010092 6.2e-32 142.1 245 37.1
Phvul.005G126500 Phaseolus vulgaris HOM05D007994 ORTHO05D010092 1.4e-31 141.0 118 55.9
FAN16G1405 Fragaria x ananassa HOM05D007994 ORTHO05D010092 3.7e-29 132.9 271 32.5
PGSC0003DMG400026538 Solanum tuberosum HOM05D007994 ORTHO05D010092 8.3e-29 131.7 266 32.3
Eucgr.J00433 Eucalyptus grandis HOM05D007994 ORTHO05D010092 4.3e-25 119.4 135 42.2
CSS0019289 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.1e-24 115.2 134 49.3
GSVIVG01031390001 Vitis vinifera HOM05D007994 ORTHO05D010092 6.8e-23 112.1 92 56.5
TPR.G15591 Trifolium pratense HOM05D007994 ORTHO05D010092 5.8e-22 109.0 65 78.5
Solyc11g066940.2 Solanum lycopersicum HOM05D007994 ORTHO05D010092 3.8e-21 106.3 252 30.2
PSO339G3278 Papaver somniferum HOM05D007994 ORTHO05D010092 8.4e-21 105.1 114 42.1
Nn2g14036 Nelumbo nucifera HOM05D007994 ORTHO05D010092 1.3e-18 97.8 92 53.3
FAN11G1628 Fragaria x ananassa HOM05D007994 ORTHO05D010092 3.0e-18 96.7 224 31.2
Peaxi162Scf00002g05422 Petunia axillaris HOM05D007994 ORTHO05D010092 3.0e-18 96.7 263 28.9
PGR119G1356 Punica granatum HOM05D007994 ORTHO05D010092 3.9e-18 96.3 172 36.0
Medtr4g055130 Medicago truncatula HOM05D007994 ORTHO05D010092 1.9e-17 94.0 65 67.7
SEGI_15329 Sequoiadendron giganteum HOM05D007994 ORTHO05D010092 6.2e-16 89.0 248 30.2
vmacro14359 Vaccinium macrocarpon HOM05D007994 ORTHO05D010092 5.3e-15 85.9 98 45.9
Psat7g190280 Pisum sativum HOM05D007994 ORTHO05D010092 6.9e-15 85.5 54 68.5
SalBow3G1236 Salvia bowleyana HOM05D007994 ORTHO05D010092 1.2e-14 84.7 252 27.0
Actinidia35451 Actinidia chinensis HOM05D000078 ORTHO05D010092 2.2e-13 80.5 61 60.7
BcaC01g02012 Brassica carinata HOM05D007994 ORTHO05D010092 2.2e-13 80.5 270 26.3
C03p69540 Brassica napus HOM05D007994 ORTHO05D010092 2.2e-13 80.5 270 26.3
BolC3t19209H Brassica oleracea HOM05D007994 ORTHO05D010092 2.2e-13 80.5 270 26.3
Ciclev10029500m.g Citrus clementina HOM05D007994 ORTHO05D010092 2.9e-13 80.1 92 47.8
A06p21760 Brassica napus HOM05D007994 ORTHO05D010092 3.8e-13 79.7 270 25.9
BraA06t25263Z Brassica rapa HOM05D007994 ORTHO05D010092 3.8e-13 79.7 270 25.9
Rhsim01G0207500 Rhododendron simsii HOM05D007994 ORTHO05D010092 3.2e-12 76.6 70 47.1
Sopen11g026660 Solanum pennellii HOM05D007994 ORTHO05D010092 5.4e-12 75.9 88 42.0
Migut.N02511 Erythranthe guttata HOM05D007994 ORTHO05D010092 1.2e-11 74.7 250 28.0
BcaB01g01144 Brassica carinata HOM05D007994 ORTHO05D010092 1.0e-10 71.6 49 55.1
Carub.0005s1038 Capsella rubella HOM05D007994 ORTHO05D010092 1.7e-10 70.9 68 47.1
Carub.0015s0006 Capsella rubella HOM05D007994 ORTHO05D010092 3.0e-10 70.1 68 47.1
AL5G22890 Arabidopsis lyrata HOM05D007994 ORTHO05D010092 1.1e-09 68.2 55 52.7
AT3G44716 Arabidopsis thaliana HOM05D007994 ORTHO05D010092 1.5e-09 67.8 55 52.7
Oeu058281.1 Olea europaea HOM05D007994 ORTHO05D010092 2.5e-09 67.0 50 62.0
Sp5g16480 Schrenkiella parvula HOM05D007994 ORTHO05D010092 3.3e-09 66.6 102 36.3
Medtr4g053310 Medicago truncatula HOM05D007994 ORTHO05D010092 1.6e-08 64.3 37 67.6
CARHR151480 Cardamine hirsuta HOM05D007994 ORTHO05D010092 8.1e-08 62.0 47 46.8
ATR0820G083 Amborella trichopoda HOM05D007994 ORTHO05D010092 1.1e-07 61.6 64 42.2
Rhsim12G0093900 Rhododendron simsii HOM05D007994 ORTHO05D010092 2.4e-07 60.5 61 45.9
Solyc05g006700.4 Solanum lycopersicum HOM05D003287 ORTHO05D003688 6.9e-07 58.9 264 25.0
Nitab4.5_0002052g0030 Nicotiana tabacum HOM05D003287 ORTHO05D003688 2.6e-06 57.0 245 26.5
Peaxi162Scf00209g00931 Petunia axillaris HOM05D003287 ORTHO05D003688 3.4e-06 56.6 246 25.6
Sopen05g002650 Solanum pennellii HOM05D003287 ORTHO05D003688 4.5e-06 56.2 251 24.3
CAN.G27.49 Capsicum annuum HOM05D003287 ORTHO05D003688 9.9e-06 55.1 240 25.0


User provided reference genes

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