Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.11G184500 Glycine max HOM05D006704 ORTHO05D008635 1.5e-225 785.8 391 100.0
Glyma.12G087800 Glycine max HOM05D006704 ORTHO05D008635 2.9e-200 701.8 391 90.0
VMungo1127G0699 Vigna mungo HOM05D006704 ORTHO05D008635 3.1e-194 681.8 391 85.7
Phvul.011G092800 Phaseolus vulgaris HOM05D006704 ORTHO05D008635 1.2e-185 653.3 394 83.8
Medtr4g053410 Medicago truncatula HOM05D006704 ORTHO05D008635 5.2e-181 637.9 391 80.6
Lj3g0010910 Lotus japonicus HOM05D006704 ORTHO05D008635 2.0e-177 625.9 400 77.8
Psat7g188440 Pisum sativum HOM05D006704 ORTHO05D008635 2.2e-176 622.5 394 80.5
arahy.Tifrunner.gnm1.ann1.JHI8LQ Arachis hypogaea HOM05D006704 ORTHO05D008635 4.4e-172 608.2 393 78.6
Lalb_Chr03g0028021 Lupinus albus HOM05D006704 ORTHO05D008635 4.4e-172 608.2 396 78.0
arahy.Tifrunner.gnm1.ann1.GMPU9C Arachis hypogaea HOM05D006704 ORTHO05D008635 7.5e-172 607.4 396 78.0
TPR.G17210 Trifolium pratense HOM05D006704 ORTHO05D008635 6.3e-171 604.4 396 78.0
Ca_19394_v3 Cicer arietinum L. HOM05D006704 ORTHO05D008635 4.1e-170 601.7 407 76.2
QL01p012560 Quercus lobata HOM05D006704 ORTHO05D008635 1.7e-152 543.1 404 69.6
Manes.11G160500 Manihot esculenta HOM05D006704 ORTHO05D008635 8.1e-150 534.3 327 75.8
RcHm_v2.0_Chr5g0044201 Rosa chinensis HOM05D006704 ORTHO05D008635 1.1e-149 533.9 400 69.0
TWI31G0547 Tripterygium wilfordii HOM05D006704 ORTHO05D008635 2.3e-149 532.7 353 73.4
FvH4_3g24630 Fragaria vesca HOM05D006704 ORTHO05D008635 7.5e-148 527.7 403 68.0
Ciclev10028571m.g Citrus clementina HOM05D006704 ORTHO05D008635 1.3e-147 526.9 359 71.6
COL.COLO4_19912 Corchorus olitorius HOM05D006704 ORTHO05D008635 1.3e-147 526.9 391 68.5
Potri.004G184400 Populus trichocarpa HOM05D006704 ORTHO05D008635 1.7e-147 526.6 324 75.3
Nn6g34957 Nelumbo nucifera HOM05D006704 ORTHO05D008635 4.9e-147 525.0 391 66.0
MD03G1142000 Malus domestica HOM05D006704 ORTHO05D008635 1.1e-146 523.9 395 66.6
Thecc.09G286000 Theobroma cacao HOM05D006704 ORTHO05D008635 1.1e-146 523.9 390 68.5
ClCG01G012900 Citrullus lanatus HOM05D006704 ORTHO05D008635 2.4e-146 522.7 401 67.3
TAR633G0569 Trochodendron aralioides HOM05D006704 ORTHO05D008635 2.4e-146 522.7 327 74.3
Duzib170G0143 Durio zibethinus HOM05D006704 ORTHO05D008635 7.1e-146 521.2 394 67.5
CANSAT54G0988 Cannabis sativa HOM05D006704 ORTHO05D008635 2.1e-145 519.6 391 67.5
Cfa010042 Carpinus fangiana HOM05D006704 ORTHO05D008635 3.5e-145 518.8 325 76.6
Gorai.009G086600 Gossypium raimondii HOM05D006704 ORTHO05D008635 3.5e-145 518.8 327 74.0
MELO3C004818.2 Cucumis melo HOM05D006704 ORTHO05D008635 6.0e-145 518.1 399 66.9
Gohir.A05G081700 Gossypium hirsutum HOM05D006704 ORTHO05D008635 1.0e-144 517.3 327 74.0
Atru.chr3.3296 Acer truncatum HOM05D006704 ORTHO05D008635 1.7e-144 516.5 394 69.0
Sabra04G0124100 Salix brachista HOM05D006704 ORTHO05D008635 2.3e-144 516.2 323 74.0
GSVIVG01036154001 Vitis vinifera HOM05D006704 ORTHO05D008635 2.3e-144 516.2 322 75.8
Dinv29464 Davidia involucrata HOM05D006704 ORTHO05D008635 1.1e-143 513.8 403 65.3
Gohir.D05G084700 Gossypium hirsutum HOM05D006704 ORTHO05D008635 1.5e-143 513.5 327 73.4
CSS0007169 Camellia sinensis var. sinensis HOM05D006704 ORTHO05D008635 1.9e-143 513.1 325 74.8
CSS0018673 Camellia sinensis var. sinensis HOM05D006704 ORTHO05D008635 1.9e-143 513.1 325 74.8
CsaV3_1G014420 Cucumis sativus L. HOM05D006704 ORTHO05D008635 2.5e-143 512.7 394 66.5
Sed0027356 Sechium edule HOM05D006704 ORTHO05D008635 1.1e-141 507.3 402 65.4
PGR119G0959 Punica granatum HOM05D006704 ORTHO05D008635 8.9e-141 504.2 397 66.5
vmacro03306 Vaccinium macrocarpon HOM05D006704 ORTHO05D008635 1.5e-140 503.4 333 71.5
FAN11G2081 Fragaria x ananassa HOM05D006704 ORTHO05D008635 5.8e-140 501.5 312 74.7
Eucgr.I00893 Eucalyptus grandis HOM05D006704 ORTHO05D008635 1.1e-138 497.3 396 66.2
Rhsim13G0110100 Rhododendron simsii HOM05D006704 ORTHO05D008635 1.4e-138 496.9 325 71.4
SalBow6G4963 Salvia bowleyana HOM05D006704 ORTHO05D008635 4.1e-138 495.4 398 62.6
Solyc06g074380.3 Solanum lycopersicum HOM05D006704 ORTHO05D008635 5.4e-138 495.0 326 71.2
FAN21G3586 Fragaria x ananassa HOM05D006704 ORTHO05D008635 7.1e-138 494.6 310 73.5
Cc01_g09380 Coffea canephora HOM05D006704 ORTHO05D008635 1.6e-137 493.4 332 69.6
Ah.08g215840 Amaranthus hybridus HOM05D006704 ORTHO05D008635 2.1e-137 493.0 397 63.0
Sopen06g030840 Solanum pennellii HOM05D006704 ORTHO05D008635 1.0e-136 490.7 326 70.9
PGSC0003DMG400007144 Solanum tuberosum HOM05D006704 ORTHO05D008635 1.0e-136 490.7 391 62.9
Hma1.2p1_0305F.1_g119670 Hydrangea macrophylla HOM05D006704 ORTHO05D008635 3.9e-136 488.8 357 66.4
AL4G22810 Arabidopsis lyrata HOM05D006704 ORTHO05D008635 6.6e-136 488.0 390 63.6
THA.LOC104800539 Tarenaya hassleriana HOM05D006704 ORTHO05D008635 8.6e-136 487.6 407 62.2
AT2G27590 Arabidopsis thaliana HOM05D006704 ORTHO05D008635 1.9e-135 486.5 391 63.7
Thhalv10016700m.g Eutrema salsugineum HOM05D006704 ORTHO05D008635 3.3e-135 485.7 391 63.9
Aqoxy2G01240 Aquilegia oxysepala HOM05D006704 ORTHO05D008635 4.3e-135 485.3 328 67.7
Aa31LG5G8320 Aethionema arabicum HOM05D006704 ORTHO05D008635 8.1e-134 481.1 389 62.7
PSO339G4200 Papaver somniferum HOM05D006704 ORTHO05D008635 8.1e-134 481.1 334 68.0
MSTRG.18751 Avicennia marina HOM05D006704 ORTHO05D008635 3.1e-133 479.2 395 65.1
PSO384G3226 Papaver somniferum HOM05D006704 ORTHO05D008635 3.1e-133 479.2 334 68.0
SGA_v2.0_scaffold22G09877 Striga asiatica HOM05D006704 ORTHO05D008635 3.1e-133 479.2 400 62.0
Hund20877 Selenicereus undatus HOM05D006704 ORTHO05D008635 4.0e-133 478.8 392 62.2
Sp4g10410 Schrenkiella parvula HOM05D006704 ORTHO05D008635 5.2e-133 478.4 393 62.3
A04p21040 Brassica napus HOM05D006704 ORTHO05D008635 1.5e-132 476.9 392 62.5
Lsat_1_v5_gn_6_40481 Lactuca sativa HOM05D006704 ORTHO05D008635 1.5e-132 476.9 396 62.6
BcaB06g28156 Brassica carinata HOM05D006704 ORTHO05D008635 2.0e-132 476.5 390 62.8
BraA04t17672Z Brassica rapa HOM05D006704 ORTHO05D008635 2.0e-132 476.5 391 63.2
Carub.0004s0825 Capsella rubella HOM05D006704 ORTHO05D008635 2.6e-132 476.1 390 61.5
CiPaw.13G137600 Carya illinoinensis HOM05D006704 ORTHO05D008635 2.6e-132 476.1 386 65.8
DCAR_006157 Daucus carota HOM05D006704 ORTHO05D008635 4.4e-132 475.3 396 61.4
EL10Ac7g15806 Beta vulgaris HOM05D006704 ORTHO05D008635 7.6e-132 474.6 400 62.0
AUR62039223 Chenopodium quinoa HOM05D006704 ORTHO05D008635 7.6e-132 474.6 335 66.3
CARHR121470 Cardamine hirsuta HOM05D006704 ORTHO05D008635 9.9e-132 474.2 394 61.4
Migut.D02353 Erythranthe guttata HOM05D006704 ORTHO05D008635 1.7e-131 473.4 395 62.0
MBI17_g08127_MAGBIO Magnolia biondii HOM05D006704 ORTHO05D008635 1.7e-131 473.4 332 66.6
BcaC02g08239 Brassica carinata HOM05D006704 ORTHO05D008635 2.2e-131 473.0 390 61.0
C04p56860 Brassica napus HOM05D006704 ORTHO05D008635 2.2e-131 473.0 390 61.0
Nitab4.5_0015718g0010 Nicotiana tabacum HOM05D006704 ORTHO05D008635 2.2e-131 473.0 414 59.4
BolC4t27219H Brassica oleracea HOM05D006704 ORTHO05D008635 4.9e-131 471.9 390 61.0
CAN.G919.21 Capsicum annuum HOM05D006704 ORTHO05D008635 6.4e-131 471.5 398 61.1
CDE06G2417 Ceratophyllum demersum HOM05D006704 ORTHO05D008635 6.4e-131 471.5 392 60.5
Haze_23402 Corylus avellana HOM05D006704 ORTHO05D008635 9.3e-130 467.6 436 56.7
HanXRQChr12g0364591 Helianthus annuus HOM05D006704 ORTHO05D008635 1.6e-129 466.8 398 62.6
AUR62009778 Chenopodium quinoa HOM05D006704 ORTHO05D008635 2.1e-129 466.5 391 58.8
ECA233G1041 Erigeron canadensis HOM05D006704 ORTHO05D008635 3.5e-129 465.7 327 69.1
Nitab4.5_0002002g0020 Nicotiana tabacum HOM05D006704 ORTHO05D008635 2.3e-128 463.0 413 58.4
Nitab4.5_0002002g0030 Nicotiana tabacum HOM05D006704 ORTHO05D008635 3.0e-128 462.6 391 61.6
Peaxi162Scf00091g00118 Petunia axillaris HOM05D006704 ORTHO05D008635 1.1e-125 454.1 326 67.8
unitig_37.g12893 Utricularia gibba HOM05D006704 ORTHO05D008635 7.6e-124 448.0 396 59.3
Lj2A980T13 Lonicera japonica HOM05D006704 ORTHO05D008635 2.2e-123 446.4 313 66.8
Sc12g0004410 Simmondsia chinensis HOM05D006704 ORTHO05D008635 1.4e-122 443.7 298 68.1
Os01g0858700 Oryza sativa ssp. japonica HOM05D006704 ORTHO05D008635 9.3e-122 441.0 322 63.0
Prupe.6G127300 Prunus persica HOM05D006704 ORTHO05D008635 2.7e-121 439.5 286 71.3
HPP92_000003 Vanilla planifolia HOM05D006704 ORTHO05D008635 4.6e-121 438.7 401 58.4
Zm00001eb147310 Zea mays HOM05D006704 ORTHO05D008635 4.6e-121 438.7 404 55.9
SEGI_32150 Sequoiadendron giganteum HOM05D006704 ORTHO05D008635 2.4e-109 399.8 339 58.4
Cpa.g.sc32.105 Carica papaya HOM05D006704 ORTHO05D008635 4.0e-109 399.1 326 62.0
ATR0820G138 Amborella trichopoda HOM05D006704 ORTHO05D008635 1.0e-107 394.4 310 61.3
FAN16G1713 Fragaria x ananassa HOM05D006704 ORTHO05D008635 1.4e-101 374.0 249 69.9
Mapoly0047s0027 Marchantia polymorpha HOM05D006704 ORTHO05D008635 3.4e-100 369.4 385 49.6
Actinidia07237 Actinidia chinensis HOM05D006704 ORTHO05D008635 7.9e-97 358.2 333 55.3
AagrBONN_evm.TU.Sc2ySwM_228.5549 Anthoceros agrestis HOM05D006704 ORTHO05D008635 3.0e-96 356.3 322 54.7
SMO200G0095 Selaginella moellendorffii HOM05D006704 ORTHO05D008635 5.7e-87 325.5 313 50.8
SMO079G0003 Selaginella moellendorffii HOM05D006704 ORTHO05D008635 7.4e-87 325.1 313 51.1
Hma1.2p1_0305F.1_g119660 Hydrangea macrophylla HOM05D006704 ORTHO05D008635 2.5e-82 310.1 225 66.2
VMungo0464G0466 Vigna mungo HOM05D006704 ORTHO05D000044 2.3e-40 170.6 165 58.8
TWI79G0085 Tripterygium wilfordii HOM05D006704 ORTHO05D008635 5.8e-39 166.0 99 71.7
MD03G1142200 Malus domestica HOM05D006704 ORTHO05D008635 1.3e-35 154.8 93 74.2
Oeu031485.1 Olea europaea HOM05D006704 ORTHO05D008635 6.6e-35 152.5 399 33.1
Cpa.g.sc32.104 Carica papaya HOM05D006704 ORTHO05D008635 1.3e-22 111.7 77 64.9
Actinidia24205 Actinidia chinensis HOM05D006704 ORTHO05D008635 8.4e-22 109.0 65 69.2
Cfa010043 Carpinus fangiana HOM05D006704 ORTHO05D008635 1.0e-19 102.1 49 95.9
Migut.D01870 Erythranthe guttata HOM05D006704 ORTHO05D008635 8.1e-17 92.4 271 25.8
SEGI_14445 Sequoiadendron giganteum HOM05D006704 ORTHO05D008635 1.1e-16 92.0 51 86.3
QL02p006829 Quercus lobata HOM05D006704 ORTHO05D004198 7.6e-15 85.9 53 73.6
MD11G1162700 Malus domestica HOM05D006704 ORTHO05D008635 5.6e-10 69.7 128 36.7


User provided reference genes

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