Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.11G162400 Glycine max HOM05D003801 ORTHO05D004812 2.8e-70 268.5 132 100.0
Glyma.18G055700 Glycine max HOM05D003801 ORTHO05D004812 1.7e-43 179.5 138 71.0
Lalb_Chr10g0103681 Lupinus albus HOM05D003801 ORTHO05D004812 6.7e-40 167.5 140 65.7
Prupe.6G045000 Prunus persica HOM05D003801 ORTHO05D004812 5.7e-39 164.5 141 62.4
MD11G1060900 Malus domestica HOM05D003801 ORTHO05D004812 2.2e-38 162.5 137 63.5
VMungo0647G2088 Vigna mungo HOM05D003801 ORTHO05D004812 2.2e-38 162.5 140 61.4
RcHm_v2.0_Chr5g0072271 Rosa chinensis HOM05D003801 ORTHO05D004812 3.7e-38 161.8 140 58.6
Thecc.09G360800 Theobroma cacao HOM05D003801 ORTHO05D004812 3.7e-38 161.8 140 60.0
FvH4_3g40080 Fragaria vesca HOM05D003801 ORTHO05D004812 4.8e-38 161.4 140 60.7
FAN11G2663 Fragaria x ananassa HOM05D003801 ORTHO05D004812 4.8e-38 161.4 140 60.7
MD03G1058800 Malus domestica HOM05D003801 ORTHO05D004812 1.1e-37 160.2 139 61.2
GSVIVG01024601001 Vitis vinifera HOM05D003801 ORTHO05D004812 1.1e-37 160.2 140 60.0
LjContig00141g0011314 Lotus japonicus HOM05D003801 ORTHO05D004812 1.4e-37 159.8 137 61.3
Sed0013919 Sechium edule HOM05D003801 ORTHO05D004812 1.8e-37 159.5 140 60.0
Ca_05689_v3 Cicer arietinum L. HOM05D003801 ORTHO05D004812 3.1e-37 158.7 140 59.3
FAN21G1607 Fragaria x ananassa HOM05D003801 ORTHO05D004812 5.3e-37 157.9 140 60.0
PGR004G1069 Punica granatum HOM05D003801 ORTHO05D004812 5.3e-37 157.9 136 61.0
Glyma.14G201500 Glycine max HOM05D003801 ORTHO05D004812 9.0e-37 157.1 138 63.0
Gohir.D03G144200 Gossypium hirsutum HOM05D003801 ORTHO05D004812 9.0e-37 157.1 140 56.4
Gorai.003G151500 Gossypium raimondii HOM05D003801 ORTHO05D004812 9.0e-37 157.1 140 56.4
QL01p018072 Quercus lobata HOM05D003801 ORTHO05D004812 9.0e-37 157.1 139 61.2
Glyma.02G233700 Glycine max HOM05D003801 ORTHO05D004812 1.2e-36 156.8 138 62.3
Ciclev10000209m.g Citrus clementina HOM05D003801 ORTHO05D004812 1.5e-36 156.4 140 60.0
Gohir.A03G024300 Gossypium hirsutum HOM05D003801 ORTHO05D004812 1.5e-36 156.4 140 56.4
Phvul.008G250000 Phaseolus vulgaris HOM05D003801 ORTHO05D004812 1.5e-36 156.4 138 60.9
TWI79G0650 Tripterygium wilfordii HOM05D003801 ORTHO05D004812 1.5e-36 156.4 145 58.6
ClCG03G000210 Citrullus lanatus HOM05D003801 ORTHO05D004812 2.0e-36 156.0 139 62.6
Ca_13017_v3 Cicer arietinum L. HOM05D003801 ORTHO05D004812 4.5e-36 154.8 141 60.3
COL.COLO4_11183 Corchorus olitorius HOM05D003801 ORTHO05D004812 4.5e-36 154.8 140 57.9
Manes.18G140750 Manihot esculenta HOM05D003801 ORTHO05D004812 4.5e-36 154.8 140 60.7
Psat5g150840 Pisum sativum HOM05D003801 ORTHO05D004812 4.5e-36 154.8 148 58.8
A08p35840 Brassica napus HOM05D003801 ORTHO05D004812 7.6e-36 154.1 145 58.6
C08p02740 Brassica napus HOM05D003801 ORTHO05D004812 7.6e-36 154.1 145 59.3
BolC8t47069H Brassica oleracea HOM05D003801 ORTHO05D004812 7.6e-36 154.1 145 59.3
BraA08t35491Z Brassica rapa HOM05D003801 ORTHO05D004812 7.6e-36 154.1 145 58.6
FAN25G2625 Fragaria x ananassa HOM05D003801 ORTHO05D004812 7.6e-36 154.1 135 60.0
CiPaw.13G066600 Carya illinoinensis HOM05D003801 ORTHO05D004812 1.0e-35 153.7 135 60.0
Potri.013G154300 Populus trichocarpa HOM05D003801 ORTHO05D004812 1.0e-35 153.7 139 59.7
FAN16G2780 Fragaria x ananassa HOM05D003801 ORTHO05D004812 1.3e-35 153.3 136 59.6
Duzib168G2305 Durio zibethinus HOM05D003801 ORTHO05D004812 1.7e-35 152.9 140 57.1
Nn5g27878 Nelumbo nucifera HOM05D003801 ORTHO05D004812 1.7e-35 152.9 136 58.1
CsaV3_1G036690 Cucumis sativus L. HOM05D003801 ORTHO05D004812 2.9e-35 152.1 138 60.1
Medtr3g466170 Medicago truncatula HOM05D003801 ORTHO05D004812 3.8e-35 151.8 140 60.0
Sp1g05660 Schrenkiella parvula HOM05D003801 ORTHO05D004812 3.8e-35 151.8 140 57.9
BraA10t42811Z Brassica rapa HOM05D003801 ORTHO05D004812 5.0e-35 151.4 144 56.9
MELO3C020500.2 Cucumis melo HOM05D003801 ORTHO05D004812 5.0e-35 151.4 140 60.0
Thhalv10006671m.g Eutrema salsugineum HOM05D003801 ORTHO05D004812 5.0e-35 151.4 139 58.3
Sabra19G0125000 Salix brachista HOM05D003801 ORTHO05D004812 6.5e-35 151.0 142 57.7
Sabra19G0130000 Salix brachista HOM05D003801 ORTHO05D004812 6.5e-35 151.0 142 57.7
TPR.G17744 Trifolium pratense HOM05D003801 ORTHO05D004812 6.5e-35 151.0 143 58.0
AT1G06950 Arabidopsis thaliana HOM05D003801 ORTHO05D004812 8.5e-35 150.6 136 58.1
EL10Ac7g15867 Beta vulgaris HOM05D003801 ORTHO05D004812 8.5e-35 150.6 141 58.2
AL1G16990 Arabidopsis lyrata HOM05D003801 ORTHO05D004812 1.1e-34 150.2 136 58.1
Carub.0001s0624 Capsella rubella HOM05D003801 ORTHO05D004812 1.1e-34 150.2 141 58.9
CARHR006620 Cardamine hirsuta HOM05D003801 ORTHO05D004812 1.1e-34 150.2 136 58.1
Haze_24439 Corylus avellana HOM05D003801 ORTHO05D004812 1.1e-34 150.2 134 59.7
Cpa.g.sc173.16 Carica papaya HOM05D003801 ORTHO05D004812 1.4e-34 149.8 138 58.7
TAR369G0201 Trochodendron aralioides HOM05D003801 ORTHO05D004812 2.5e-34 149.1 138 56.5
BcaC05g24660 Brassica carinata HOM05D003801 ORTHO05D004812 3.2e-34 148.7 136 58.1
BolC5t29277H Brassica oleracea HOM05D003801 ORTHO05D004812 3.2e-34 148.7 136 58.1
AUR62009720 Chenopodium quinoa HOM05D003801 ORTHO05D004812 3.2e-34 148.7 131 60.3
AUR62036227 Chenopodium quinoa HOM05D003801 ORTHO05D004812 3.2e-34 148.7 131 60.3
Sabra19G0125200 Salix brachista HOM05D003801 ORTHO05D004812 3.2e-34 148.7 142 57.7
TPR.G24942 Trifolium pratense HOM05D003801 ORTHO05D004812 3.2e-34 148.7 141 57.4
Aa31LG5G6380 Aethionema arabicum HOM05D003801 ORTHO05D004812 4.2e-34 148.3 136 57.4
Eucgr.B04013 Eucalyptus grandis HOM05D003801 ORTHO05D004812 5.5e-34 147.9 130 62.3
Atru.chr1.2566 Acer truncatum HOM05D003801 ORTHO05D004812 7.2e-34 147.5 139 55.4
Atru.chr1.2574 Acer truncatum HOM05D003801 ORTHO05D004812 7.2e-34 147.5 139 55.4
TWI75G1891 Tripterygium wilfordii HOM05D003801 ORTHO05D004812 9.3e-34 147.1 142 57.7
arahy.Tifrunner.gnm1.ann1.Z7TKRX Arachis hypogaea HOM05D003801 ORTHO05D004812 1.2e-33 146.7 130 61.5
MSTRG.17901 Avicennia marina HOM05D003801 ORTHO05D004812 1.6e-33 146.4 142 57.7
CANSAT54G0450 Cannabis sativa HOM05D003801 ORTHO05D004812 1.6e-33 146.4 134 60.4
Sabra13G0124100 Salix brachista HOM05D003801 ORTHO05D004812 2.1e-33 146.0 167 50.9
TAR623G1445 Trochodendron aralioides HOM05D003801 ORTHO05D004812 2.7e-33 145.6 137 55.5
CDE04G3388 Ceratophyllum demersum HOM05D003801 ORTHO05D004812 3.6e-33 145.2 140 55.0
MSTRG.18544 Avicennia marina HOM05D003801 ORTHO05D004812 6.1e-33 144.4 140 54.3
Psat2g052760 Pisum sativum HOM05D003801 ORTHO05D004812 7.9e-33 144.1 137 54.7
Medtr5g074690 Medicago truncatula HOM05D003801 ORTHO05D004812 1.0e-32 143.7 136 55.9
Oeu044915.1 Olea europaea HOM05D003801 ORTHO05D004812 1.0e-32 143.7 143 54.5
Peaxi162Scf00095g00168 Petunia axillaris HOM05D003801 ORTHO05D004812 2.3e-32 142.5 133 58.6
ATR0584G141 Amborella trichopoda HOM05D003801 ORTHO05D004812 3.9e-32 141.7 126 57.1
Eucgr.I01027 Eucalyptus grandis HOM05D003801 ORTHO05D004812 5.1e-32 141.4 130 59.2
unitig_747.g21451 Utricularia gibba HOM05D003801 ORTHO05D004812 6.7e-32 141.0 144 51.4
Cfa011800 Carpinus fangiana HOM05D003801 ORTHO05D004812 1.1e-31 140.2 126 57.9
Dinv28708 Davidia involucrata HOM05D003801 ORTHO05D004812 1.9e-31 139.4 127 58.3
Potri.019G127000 Populus trichocarpa HOM05D003801 ORTHO05D004812 1.9e-31 139.4 132 57.6
Hund05047 Selenicereus undatus HOM05D003801 ORTHO05D004812 1.9e-31 139.4 136 55.1
HanXRQChr08g0228441 Helianthus annuus HOM05D003801 ORTHO05D004812 3.3e-31 138.7 137 51.1
Migut.D00836 Erythranthe guttata HOM05D003801 ORTHO05D004812 4.3e-31 138.3 137 56.2
Nn1g08532 Nelumbo nucifera HOM05D003801 ORTHO05D004812 4.3e-31 138.3 136 53.7
A10p05480 Brassica napus HOM05D003801 ORTHO05D004812 5.7e-31 137.9 168 48.8
PSO384G0852 Papaver somniferum HOM05D003801 ORTHO05D004812 7.4e-31 137.5 135 56.3
CAN.G1702.5 Capsicum annuum HOM05D003801 ORTHO05D004812 9.7e-31 137.1 135 54.8
Cc01_g14930 Coffea canephora HOM05D003801 ORTHO05D004812 1.7e-30 136.3 135 54.8
DCAR_028861 Daucus carota HOM05D003801 ORTHO05D004812 2.2e-30 136.0 133 54.9
Hma1.2p1_1637F.1_g294880 Hydrangea macrophylla HOM05D003801 ORTHO05D004812 2.2e-30 136.0 135 53.3
Nitab4.5_0004906g0050 Nicotiana tabacum HOM05D003801 ORTHO05D004812 3.7e-30 135.2 131 55.7
ECA247G0395 Erigeron canadensis HOM05D003801 ORTHO05D004812 4.8e-30 134.8 136 50.0
Actinidia32598 Actinidia chinensis HOM05D003801 ORTHO05D004812 6.3e-30 134.4 142 51.4
CSS0002946 Camellia sinensis var. sinensis HOM05D003801 ORTHO05D004812 6.3e-30 134.4 139 51.8
Cc01_g15070 Coffea canephora HOM05D003801 ORTHO05D004812 6.3e-30 134.4 131 55.7
PSO339G1799 Papaver somniferum HOM05D003801 ORTHO05D004812 2.4e-29 132.5 133 54.9
Sc17g0002560 Simmondsia chinensis HOM05D003801 ORTHO05D004812 2.4e-29 132.5 126 57.1
Solyc09g031780.3 Solanum lycopersicum HOM05D003801 ORTHO05D004812 1.5e-28 129.8 136 51.5
Sopen09g014770 Solanum pennellii HOM05D003801 ORTHO05D004812 2.6e-28 129.0 132 52.3
Oeu050040.1 Olea europaea HOM05D003801 ORTHO05D004812 7.7e-28 127.5 123 56.1
Lsat_1_v5_gn_9_14381 Lactuca sativa HOM05D003801 ORTHO05D004812 2.2e-27 125.9 125 51.2
Lj1A124T30 Lonicera japonica HOM05D003801 ORTHO05D004812 6.5e-27 124.4 140 47.9
SMO347G0592 Selaginella moellendorffii HOM05D003801 ORTHO05D004812 8.5e-27 124.0 128 48.4
Zm00001eb044910 Zea mays HOM05D003801 ORTHO05D004812 1.2e-25 120.2 150 44.0
HPP92_014541 Vanilla planifolia HOM05D003801 ORTHO05D004812 1.6e-25 119.8 140 45.0
SEGI_40714 Sequoiadendron giganteum HOM05D003801 ORTHO05D004812 4.7e-25 118.2 144 44.4
Mapoly0002s0142 Marchantia polymorpha HOM05D003801 ORTHO05D004812 7.9e-25 117.5 133 45.1
Os10g0492000 Oryza sativa ssp. japonica HOM05D003801 ORTHO05D004812 6.7e-24 114.4 151 45.0
Aqoxy2G00749 Aquilegia oxysepala HOM05D003801 ORTHO05D004812 8.8e-24 114.0 120 48.3
Pp3c14_10270 Physcomitrium patens HOM05D003801 ORTHO05D004812 2.0e-23 112.8 136 40.4
Pp3c17_6540 Physcomitrium patens HOM05D003801 ORTHO05D004812 4.4e-23 111.7 144 40.3
BcaB03g13435 Brassica carinata HOM05D003801 ORTHO05D004812 3.7e-22 108.6 109 50.5
CBR_g29785 Chara braunii HOM05D003801 ORTHO05D004812 1.4e-21 106.7 131 39.7
AL1G17110 Arabidopsis lyrata HOM05D003801 ORTHO05D004812 6.9e-21 104.4 102 51.0
SHI19243 Sapria himalayana HOM05D003801 ORTHO05D004812 9.1e-21 104.0 148 42.6
BcaB02g06769 Brassica carinata HOM05D003801 ORTHO05D004812 2.0e-20 102.8 110 51.8
SGA_v2.0_scaffold20G09298 Striga asiatica HOM05D003801 ORTHO05D004812 1.0e-19 100.5 142 37.3
Rhsim13G0062300 Rhododendron simsii HOM05D003801 ORTHO05D004812 1.0e-16 90.5 182 33.5
Lj6A615T91 Lonicera japonica HOM05D003801 ORTHO05D004812 2.3e-16 89.4 63 58.7
Nitab4.5_0000486g0130 Nicotiana tabacum HOM05D003801 ORTHO05D004812 3.0e-16 89.0 58 69.0
Nitab4.5_0004637g0060 Nicotiana tabacum HOM05D003801 ORTHO05D004812 5.7e-15 84.7 53 71.7
CDE07G0490 Ceratophyllum demersum HOM05D003801 ORTHO05D004812 2.2e-14 82.8 111 47.7
Dinv12255 Davidia involucrata HOM05D003801 ORTHO05D004812 1.8e-13 79.7 84 47.6
PRCOL_00000154 Prasinoderma coloniale HOM05D003801 ORTHO05D004812 4.5e-12 75.1 146 30.1
Sabra19G0124700 Salix brachista HOM05D003801 ORTHO05D004812 2.2e-11 72.8 54 64.8
PSO339G3141 Papaver somniferum HOM05D003801 ORTHO05D004812 3.8e-11 72.0 52 55.8
Sabra19G0125300 Salix brachista HOM05D003801 ORTHO05D004812 8.5e-11 70.9 42 76.2
VMungo1215G2313 Vigna mungo HOM05D003801 ORTHO05D004812 8.5e-11 70.9 97 41.2
Sabra19G0125100 Salix brachista HOM05D003801 ORTHO05D004812 1.1e-10 70.5 41 75.6
COL.COLO4_07614 Corchorus olitorius HOM05D003801 ORTHO05D004812 1.9e-10 69.7 102 41.2
C01p22580 Brassica napus HOM05D003801 ORTHO05D017532 7.2e-10 67.8 43 67.4
MCO16G620 Micromonas commoda HOM05D003801 ORTHO05D004812 7.2e-10 67.8 134 26.9
vmacro02901 Vaccinium macrocarpon HOM05D003801 ORTHO05D004812 9.4e-10 67.4 143 33.6
Lj1A123G49 Lonicera japonica HOM05D003801 ORTHO05D004812 1.2e-09 67.0 104 42.3
TAR624G1267 Trochodendron aralioides HOM05D004621 ORTHO05D005817 3.6e-09 65.5 40 65.0
BolC1t01884H Brassica oleracea HOM05D003801 ORTHO05D017532 6.1e-09 64.7 40 70.0
BolC1t02191H Brassica oleracea HOM05D003801 ORTHO05D017532 6.1e-09 64.7 40 70.0


User provided reference genes

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