Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.11G154214 Glycine max HOM05D006884 ORTHO05D008604 0.0e+00 1326.2 682 100.0
Phvul.011G073400 Phaseolus vulgaris HOM05D006884 ORTHO05D008604 0.0e+00 1172.5 678 89.1
VMungo1127G0767 Vigna mungo HOM05D006884 ORTHO05D008604 0.0e+00 1156.4 678 87.8
Lj3g0026527 Lotus japonicus HOM05D006884 ORTHO05D008604 4.6e-310 1067.4 682 80.6
Psat7g223440 Pisum sativum HOM05D006884 ORTHO05D008604 3.8e-304 1047.7 684 79.2
Medtr4g060500 Medicago truncatula HOM05D006884 ORTHO05D008604 1.3e-301 1039.3 682 78.3
TPR.G15554 Trifolium pratense HOM05D006884 ORTHO05D008604 2.0e-297 1025.4 687 77.7
arahy.Tifrunner.gnm1.ann1.AY6ICH Arachis hypogaea HOM05D006884 ORTHO05D008604 1.9e-295 1018.8 687 77.9
Lalb_Chr01g0004191 Lupinus albus HOM05D006884 ORTHO05D008604 9.7e-292 1006.5 684 76.6
Ca_19247_v3 Cicer arietinum L. HOM05D006884 ORTHO05D008604 4.8e-283 977.6 682 75.5
QL01p023227 Quercus lobata HOM05D006884 ORTHO05D008604 1.9e-263 912.5 683 70.0
Cfa011353 Carpinus fangiana HOM05D006884 ORTHO05D008604 1.2e-260 903.3 686 68.8
arahy.Tifrunner.gnm1.ann1.H1W27A Arachis hypogaea HOM05D006884 ORTHO05D008604 1.7e-256 889.4 611 76.4
Haze_23897 Corylus avellana HOM05D006884 ORTHO05D008604 9.4e-255 883.6 730 64.7
GSVIVG01025156001 Vitis vinifera HOM05D006884 ORTHO05D008604 8.0e-254 880.6 685 67.0
CiPaw.13G108400 Carya illinoinensis HOM05D006884 ORTHO05D008604 1.4e-253 879.8 686 66.2
CANSAT54G0393 Cannabis sativa HOM05D006884 ORTHO05D008604 1.4e-250 869.8 686 67.1
COL.COLO4_05186 Corchorus olitorius HOM05D006884 ORTHO05D008604 1.0e-248 863.6 687 66.4
Atru.chr3.3680 Acer truncatum HOM05D006884 ORTHO05D008604 1.7e-248 862.8 689 65.5
Duzib168G2304 Durio zibethinus HOM05D006884 ORTHO05D008604 1.7e-248 862.8 688 66.9
Prupe.6G097500 Prunus persica HOM05D006884 ORTHO05D008604 2.3e-245 852.4 686 67.1
Hma1.2p1_0071F.1_g038150 Hydrangea macrophylla HOM05D006884 ORTHO05D008604 5.7e-244 847.8 685 66.0
Actinidia07119 Actinidia chinensis HOM05D006884 ORTHO05D008604 9.8e-244 847.0 683 64.1
PGR119G0543 Punica granatum HOM05D006884 ORTHO05D008604 3.1e-242 842.0 682 64.7
Manes.04G024400 Manihot esculenta HOM05D006884 ORTHO05D008604 4.1e-242 841.6 685 63.9
TAR369G0310 Trochodendron aralioides HOM05D006884 ORTHO05D008604 7.8e-241 837.4 687 63.9
CSS0004159 Camellia sinensis var. sinensis HOM05D006884 ORTHO05D008604 1.0e-240 837.0 688 63.1
ClCG03G002300 Citrullus lanatus HOM05D006884 ORTHO05D008604 8.6e-240 833.9 687 64.5
Eucgr.J00944 Eucalyptus grandis HOM05D006884 ORTHO05D008604 3.3e-239 832.0 687 63.8
Ciclev10027944m.g Citrus clementina HOM05D006884 ORTHO05D008604 3.6e-238 828.6 677 64.1
TWI38G0581 Tripterygium wilfordii HOM05D006884 ORTHO05D008604 1.4e-237 826.6 686 64.1
Gorai.013G255800 Gossypium raimondii HOM05D006884 ORTHO05D008604 4.0e-237 825.1 686 63.4
Gohir.D13G225000 Gossypium hirsutum HOM05D006884 ORTHO05D008604 2.0e-236 822.8 686 63.4
Gohir.A13G221000 Gossypium hirsutum HOM05D006884 ORTHO05D008604 1.3e-235 820.1 686 62.8
Potri.009G014900 Populus trichocarpa HOM05D006884 ORTHO05D008604 7.0e-234 814.3 682 62.8
MELO3C005036.2 Cucumis melo HOM05D006884 ORTHO05D008604 3.9e-232 808.5 687 62.4
vmacro03180 Vaccinium macrocarpon HOM05D006884 ORTHO05D008604 8.6e-232 807.4 693 61.3
Aqoxy4G03234 Aquilegia oxysepala HOM05D006884 ORTHO05D008604 1.9e-231 806.2 689 62.8
RcHm_v2.0_Chr5g0060051 Rosa chinensis HOM05D006884 ORTHO05D008604 2.8e-230 802.4 684 63.5
TWI38G2405 Tripterygium wilfordii HOM05D006884 ORTHO05D008604 2.8e-230 802.4 686 62.8
Cc01_g11430 Coffea canephora HOM05D006884 ORTHO05D008604 2.3e-229 799.3 676 62.3
DCAR_018827 Daucus carota HOM05D006884 ORTHO05D008604 4.0e-229 798.5 679 61.1
Lj2C1032T7 Lonicera japonica HOM05D006884 ORTHO05D008604 1.2e-228 797.0 714 60.4
Sed0010984 Sechium edule HOM05D006884 ORTHO05D008604 9.2e-226 787.3 688 60.6
Oeu005901.1 Olea europaea HOM05D006884 ORTHO05D008604 1.7e-224 783.1 705 60.6
Sopen11g027910 Solanum pennellii HOM05D006884 ORTHO05D008604 1.1e-223 780.4 685 60.1
FvH4_3g32920 Fragaria vesca HOM05D006884 ORTHO05D008604 1.9e-223 779.6 684 61.5
Solyc11g069170.2 Solanum lycopersicum HOM05D006884 ORTHO05D008604 1.6e-222 776.5 685 59.7
Cpa.g.sc139.78 Carica papaya HOM05D006884 ORTHO05D008604 2.8e-222 775.8 607 67.5
FAN11G3181 Fragaria x ananassa HOM05D006884 ORTHO05D008604 7.5e-220 767.7 684 61.1
PSO063G0254 Papaver somniferum HOM05D006884 ORTHO05D008604 7.5e-220 767.7 690 60.4
FAN25G2544 Fragaria x ananassa HOM05D006884 ORTHO05D008604 2.7e-217 759.2 683 60.3
Peaxi162Scf00351g00322 Petunia axillaris HOM05D006884 ORTHO05D008604 4.6e-217 758.4 698 58.7
MSTRG.12324 Avicennia marina HOM05D006884 ORTHO05D008604 2.5e-215 752.7 690 58.7
THA.LOC104815748 Tarenaya hassleriana HOM05D006884 ORTHO05D008604 3.3e-215 752.3 692 59.2
PGSC0003DMG400008066 Solanum tuberosum HOM05D006884 ORTHO05D008604 2.8e-214 749.2 728 55.8
Migut.N02612 Erythranthe guttata HOM05D006884 ORTHO05D008604 5.2e-213 745.0 686 58.0
Sc06g0010010 Simmondsia chinensis HOM05D006884 ORTHO05D008604 5.2e-213 745.0 684 59.5
Nitab4.5_0000999g0100 Nicotiana tabacum HOM05D006884 ORTHO05D008604 2.1e-209 733.0 733 55.3
AT1G07970 Arabidopsis thaliana HOM05D006884 ORTHO05D008604 3.5e-209 732.3 692 57.4
Carub.0001s0732 Capsella rubella HOM05D006884 ORTHO05D008604 1.7e-208 729.9 690 57.2
Thhalv10006976m.g Eutrema salsugineum HOM05D006884 ORTHO05D008604 3.0e-208 729.2 687 57.1
HanXRQChr07g0197411 Helianthus annuus HOM05D006884 ORTHO05D008604 3.0e-208 729.2 683 56.7
ECA238G4524 Erigeron canadensis HOM05D006884 ORTHO05D008604 3.9e-208 728.8 673 57.4
CARHR007750 Cardamine hirsuta HOM05D006884 ORTHO05D008604 5.1e-208 728.4 691 57.5
Thecc.09G259000 Theobroma cacao HOM05D006884 ORTHO05D008604 1.5e-207 726.9 485 74.2
A06p05030 Brassica napus HOM05D006884 ORTHO05D008604 1.2e-206 723.8 691 57.0
C05p05970 Brassica napus HOM05D006884 ORTHO05D008604 2.1e-206 723.0 691 57.2
BolC5t29358H Brassica oleracea HOM05D003203 ORTHO05D003526 4.7e-206 721.8 691 57.2
BraA06t23709Z Brassica rapa HOM05D006884 ORTHO05D008604 7.6e-204 714.5 691 56.3
PSO339G1719 Papaver somniferum HOM05D006884 ORTHO05D008604 2.9e-203 712.6 611 62.7
Hund10472 Selenicereus undatus HOM05D006884 ORTHO05D008604 1.1e-202 710.7 685 57.7
Nitab4.5_0002186g0020 Nicotiana tabacum HOM05D006884 ORTHO05D008604 7.1e-202 708.0 638 59.9
AL1G18300 Arabidopsis lyrata HOM05D006884 ORTHO05D008604 4.6e-201 705.3 687 56.0
AUR62025009 Chenopodium quinoa HOM05D006884 ORTHO05D008604 3.3e-199 699.1 688 55.7
Aa31LG8G13130 Aethionema arabicum HOM05D006884 ORTHO05D008604 6.2e-198 694.9 683 55.8
BcaC05g24709 Brassica carinata HOM05D006884 ORTHO05D008604 1.1e-197 694.1 692 55.8
BcaB02g06701 Brassica carinata HOM05D006884 ORTHO05D008604 1.8e-197 693.3 669 57.4
ATR0759G051 Amborella trichopoda HOM05D006884 ORTHO05D008604 1.5e-196 690.3 688 55.8
MBI14_g07928_MAGBIO Magnolia biondii HOM05D006884 ORTHO05D008604 4.5e-196 688.7 607 60.6
Lsat_1_v5_gn_2_97900 Lactuca sativa HOM05D006884 ORTHO05D008604 1.9e-194 683.3 678 53.7
SalBow3G0672 Salvia bowleyana HOM05D006884 ORTHO05D008604 3.2e-194 682.6 690 54.9
Sabra09G0009400 Salix brachista HOM05D006884 ORTHO05D008604 7.9e-193 677.9 501 68.3
AUR62006527 Chenopodium quinoa HOM05D006884 ORTHO05D008604 3.9e-192 675.6 687 54.9
SGA_v2.0_scaffold2G00907 Striga asiatica HOM05D006884 ORTHO05D008604 2.8e-190 669.5 644 58.2
CsaV3_1G012990 Cucumis sativus L. HOM05D006884 ORTHO05D008604 2.0e-180 636.7 588 60.0
HPP92_025089 Vanilla planifolia HOM05D006884 ORTHO05D008604 2.0e-180 636.7 678 52.1
CAN.G631.5 Capsicum annuum HOM05D006884 ORTHO05D008604 2.9e-179 632.9 629 54.7
Zm00001eb397080 Zea mays HOM05D006884 ORTHO05D008604 7.1e-178 628.2 681 51.0
Os03g0288800 Oryza sativa ssp. japonica HOM05D006884 ORTHO05D008604 1.1e-175 620.9 683 51.0
SEGI_12216 Sequoiadendron giganteum HOM05D006884 ORTHO05D008604 3.8e-171 605.9 708 48.3
CDE09G0273 Ceratophyllum demersum HOM05D006884 ORTHO05D008604 1.4e-165 587.4 643 51.6
Rhsim08G0043200 Rhododendron simsii HOM05D006884 ORTHO05D008604 1.3e-163 580.9 386 72.3
Sp4g05030 Schrenkiella parvula HOM05D006884 ORTHO05D008604 7.9e-161 571.6 610 52.8
unitig_61.g26171 Utricularia gibba HOM05D006884 ORTHO05D008604 2.1e-137 493.8 618 47.9
arahy.Tifrunner.gnm1.ann1.REDW7M Arachis hypogaea HOM05D006884 ORTHO05D008604 1.0e-136 491.5 281 86.5
Mapoly0043s0112 Marchantia polymorpha HOM05D006884 ORTHO05D008604 1.8e-136 490.7 704 43.3
SMO364G0331 Selaginella moellendorffii HOM05D006884 ORTHO05D008604 5.9e-132 475.7 488 50.4
Actinidia24083 Actinidia chinensis HOM05D006884 ORTHO05D008604 2.3e-131 473.8 301 72.4
Pp3c12_22070 Physcomitrium patens HOM05D006884 ORTHO05D008604 5.9e-124 449.1 712 40.9
BcaB07g34161 Brassica carinata HOM05D006884 ORTHO05D008604 5.0e-115 419.5 357 57.7
Glyma.12G071233 Glycine max HOM05D006884 ORTHO05D008604 4.9e-94 349.7 218 84.4
Glyma.12G071167 Glycine max HOM05D006884 ORTHO05D008604 3.5e-84 317.0 204 87.7
Actinidia24084 Actinidia chinensis HOM05D006884 ORTHO05D008604 2.1e-52 211.5 315 46.3
Nn1g02428 Nelumbo nucifera HOM05D006884 ORTHO05D008604 6.7e-43 179.9 104 81.7
Nn1g02077 Nelumbo nucifera HOM05D006884 ORTHO05D008604 1.7e-41 175.3 104 79.8
Nn3g17897 Nelumbo nucifera HOM05D006884 ORTHO05D008604 5.9e-39 166.8 104 76.0
Nn4g22222 Nelumbo nucifera HOM05D006884 ORTHO05D008604 5.9e-39 166.8 100 78.0
SEGI_34075 Sequoiadendron giganteum HOM05D000114 ORTHO05D008604 4.1e-32 144.1 427 31.6
Nn4g22225 Nelumbo nucifera HOM05D006884 ORTHO05D008604 1.5e-29 135.6 84 76.2
Nn3g19002 Nelumbo nucifera HOM05D005115 ORTHO05D005703 4.2e-29 134.0 84 77.4
Cre12.g555200 Chlamydomonas reinhardtii HOM05D006884 ORTHO05D008604 1.7e-14 85.5 330 26.4
Nitab4.5_0002186g0030 Nicotiana tabacum HOM05D006884 ORTHO05D008604 1.1e-13 82.8 47 76.6
Nn1g05254 Nelumbo nucifera HOM05D006884 ORTHO05D008604 1.9e-13 82.0 70 55.7
Aa31LG3G16570 Aethionema arabicum HOM05D006884 ORTHO05D008604 5.2e-11 73.9 180 31.7
Nn1g03843 Nelumbo nucifera HOM05D006884 ORTHO05D008604 3.7e-09 67.8 51 60.8
AagrBONN_evm.TU.Sc2ySwM_117.1869 Anthoceros agrestis HOM05D006884 ORTHO05D008604 1.0e-06 59.7 215 27.0


User provided reference genes

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