Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.11G149600 Glycine max HOM05D007435 ORTHO05D009338 2.2e-65 252.3 142 100.0
Phvul.005G033400 Phaseolus vulgaris HOM05D007435 ORTHO05D009338 8.8e-38 160.6 145 66.9
Glyma.04G142000 Glycine max HOM05D007435 ORTHO05D009338 1.0e-33 147.1 140 65.0
VMungo1080G0635 Vigna mungo HOM05D007435 ORTHO05D009338 4.4e-29 131.7 142 61.3
Lj3g0014273 Lotus japonicus HOM05D007435 ORTHO05D009338 2.1e-23 112.8 142 53.5
Medtr3g023160 Medicago truncatula HOM05D007435 ORTHO05D009338 2.1e-23 112.8 142 57.0
Psat5g213320 Pisum sativum HOM05D007435 ORTHO05D009338 3.0e-22 109.0 144 47.9
Cpa.g.sc197.17 Carica papaya HOM05D007435 ORTHO05D009338 5.0e-17 91.7 119 51.3
MD07G1027000 Malus domestica HOM05D007435 ORTHO05D009338 1.5e-16 90.1 120 45.8
MD02G1297000 Malus domestica HOM05D007435 ORTHO05D009338 4.2e-16 88.6 120 45.8
Lalb_Chr25g0282731 Lupinus albus HOM05D007435 ORTHO05D009338 9.5e-16 87.4 135 45.9
TWI63G0886 Tripterygium wilfordii HOM05D007435 ORTHO05D009338 9.5e-16 87.4 140 44.3
Actinidia21528 Actinidia chinensis HOM05D007435 ORTHO05D009338 1.2e-15 87.0 103 46.6
CiPaw.13G009600 Carya illinoinensis HOM05D007435 ORTHO05D009338 1.6e-15 86.7 124 50.0
TAR065G0004 Trochodendron aralioides HOM05D007435 ORTHO05D009338 2.1e-15 86.3 135 43.0
Prupe.2G027100 Prunus persica HOM05D007435 ORTHO05D009338 2.8e-15 85.9 124 41.1
Rhsim05G0126700 Rhododendron simsii HOM05D007435 ORTHO05D009338 2.8e-15 85.9 143 39.2
arahy.Tifrunner.gnm1.ann1.4Y0UDN Arachis hypogaea HOM05D007435 ORTHO05D009338 6.1e-15 84.7 135 53.3
Actinidia02252 Actinidia chinensis HOM05D007435 ORTHO05D009338 1.0e-14 84.0 103 44.7
Ca_27018_v3 Cicer arietinum L. HOM05D007435 ORTHO05D009338 1.8e-14 83.2 92 56.5
Dinv32059 Davidia involucrata HOM05D007435 ORTHO05D009338 1.8e-14 83.2 105 44.8
CSS0019859 Camellia sinensis var. sinensis HOM05D007435 ORTHO05D009338 2.3e-14 82.8 137 42.3
Sed0015818 Sechium edule HOM05D007435 ORTHO05D009338 2.3e-14 82.8 114 46.5
Manes.11G002100 Manihot esculenta HOM05D007435 ORTHO05D009338 3.0e-14 82.4 135 43.0
AUR62026808 Chenopodium quinoa HOM05D007435 ORTHO05D009338 4.0e-14 82.0 130 42.3
MELO3C005141.2 Cucumis melo HOM05D007435 ORTHO05D009338 4.0e-14 82.0 118 44.1
TAR369G0027 Trochodendron aralioides HOM05D007435 ORTHO05D009338 4.0e-14 82.0 106 45.3
QL04p013057 Quercus lobata HOM05D007435 ORTHO05D009338 6.8e-14 81.3 149 43.0
ClCG01G007560 Citrullus lanatus HOM05D007435 ORTHO05D009338 8.9e-14 80.9 126 44.4
Thecc.10G004500 Theobroma cacao HOM05D007435 ORTHO05D009338 8.9e-14 80.9 123 45.5
Cfa010840 Carpinus fangiana HOM05D007435 ORTHO05D009338 1.5e-13 80.1 122 48.4
COL.COLO4_19345 Corchorus olitorius HOM05D007435 ORTHO05D009338 1.5e-13 80.1 145 44.1
Haze_03106 Corylus avellana HOM05D007435 ORTHO05D009338 1.5e-13 80.1 122 47.5
FvH4_7g02100 Fragaria vesca HOM05D007435 ORTHO05D009338 1.5e-13 80.1 147 37.4
CsaV3_5G024570 Cucumis sativus L. HOM05D007435 ORTHO05D009338 2.0e-13 79.7 122 44.3
Nn7g36439 Nelumbo nucifera HOM05D007435 ORTHO05D009338 2.0e-13 79.7 97 45.4
arahy.Tifrunner.gnm1.ann1.KRJM02 Arachis hypogaea HOM05D007435 ORTHO05D009338 2.6e-13 79.3 138 48.6
Duzib128G0703 Durio zibethinus HOM05D007435 ORTHO05D009338 3.4e-13 79.0 133 42.9
Eucgr.G03266 Eucalyptus grandis HOM05D007435 ORTHO05D009338 3.4e-13 79.0 124 41.1
AUR62037244 Chenopodium quinoa HOM05D007435 ORTHO05D009338 4.4e-13 78.6 104 44.2
RcHm_v2.0_Chr1g0319401 Rosa chinensis HOM05D007435 ORTHO05D009338 5.7e-13 78.2 143 38.5
Sc10g0004150 Simmondsia chinensis HOM05D007435 ORTHO05D009338 5.7e-13 78.2 116 42.2
Ah.10g030920 Amaranthus hybridus HOM05D007435 ORTHO05D009338 9.8e-13 77.4 120 42.5
Dinv03572 Davidia involucrata HOM05D007435 ORTHO05D009338 9.8e-13 77.4 102 43.1
Dinv05039 Davidia involucrata HOM05D007435 ORTHO05D009338 9.8e-13 77.4 102 43.1
QL04p012434 Quercus lobata HOM05D007435 ORTHO05D009338 9.8e-13 77.4 149 42.3
FAN03G1772 Fragaria x ananassa HOM05D007435 ORTHO05D009338 2.8e-12 75.9 101 42.6
CARHR239440 Cardamine hirsuta HOM05D007435 ORTHO05D009338 3.7e-12 75.5 128 40.6
unitig_578.g16053 Utricularia gibba HOM05D007435 ORTHO05D009338 3.7e-12 75.5 142 40.1
Carub.0007s0901 Capsella rubella HOM05D007435 ORTHO05D009338 8.3e-12 74.3 104 41.3
PSO339G5565 Papaver somniferum HOM05D007435 ORTHO05D009338 8.3e-12 74.3 102 43.1
SalBow6G1324 Salvia bowleyana HOM05D007435 ORTHO05D009338 8.3e-12 74.3 135 43.0
Aa31LG2G18760 Aethionema arabicum HOM05D007435 ORTHO05D009338 1.4e-11 73.6 104 42.3
SGA_v2.0_scaffold354G49740 Striga asiatica HOM05D007435 ORTHO05D009338 1.8e-11 73.2 111 39.6
AT4G31560 Arabidopsis thaliana HOM05D007435 ORTHO05D009338 3.1e-11 72.4 111 41.4
Duzib114G0226 Durio zibethinus HOM05D007435 ORTHO05D009338 4.1e-11 72.0 154 43.5
ATR0006G035 Amborella trichopoda HOM05D007435 ORTHO05D009338 1.2e-10 70.5 105 41.9
MBI13_g04786_MAGBIO Magnolia biondii HOM05D007435 ORTHO05D009338 1.2e-10 70.5 103 46.6
AL343U10010 Arabidopsis lyrata HOM05D007435 ORTHO05D009338 1.6e-10 70.1 111 41.4
THA.LOC104826709 Tarenaya hassleriana HOM05D007435 ORTHO05D009338 1.6e-10 70.1 102 44.1
DCAR_009211 Daucus carota HOM05D007435 ORTHO05D009338 2.0e-10 69.7 137 34.3
A01p06670 Brassica napus HOM05D005366 ORTHO05D006323 3.5e-10 68.9 131 38.9
HanXRQChr01g0020861 Helianthus annuus HOM05D007435 ORTHO05D009338 4.5e-10 68.6 114 38.6
Lsat_1_v5_gn_1_100400 Lactuca sativa HOM05D007435 ORTHO05D009338 4.5e-10 68.6 138 39.9
Sp7g29390 Schrenkiella parvula HOM05D007435 ORTHO05D009338 5.9e-10 68.2 125 38.4
BraA01t00625Z Brassica rapa HOM05D005366 ORTHO05D006323 1.0e-09 67.4 130 38.5
CANSAT80G0490 Cannabis sativa HOM05D007435 ORTHO05D009338 1.3e-09 67.0 136 39.0
BcaNung04129 Brassica carinata HOM05D007435 ORTHO05D009338 2.9e-09 65.9 152 35.5
C07p58750 Brassica napus HOM05D007435 ORTHO05D009338 2.9e-09 65.9 131 38.9
BolC7t46323H Brassica oleracea HOM05D007435 ORTHO05D009338 2.9e-09 65.9 131 38.9
Nitab4.5_0000316g0230 Nicotiana tabacum HOM05D002000 ORTHO05D002027 2.9e-09 65.9 127 37.8
Peaxi162Scf00087g00129 Petunia axillaris HOM05D007435 ORTHO05D009338 3.8e-09 65.5 151 35.8
BcaNung01514 Brassica carinata HOM05D007435 ORTHO05D009338 5.0e-09 65.1 133 37.6
PGSC0003DMG401006753 Solanum tuberosum HOM05D007435 ORTHO05D009338 6.6e-09 64.7 103 40.8
Thhalv10026511m.g Eutrema salsugineum HOM05D007435 ORTHO05D009338 8.6e-09 64.3 111 37.8
Solyc01g068190.3 Solanum lycopersicum HOM05D007435 ORTHO05D009338 8.6e-09 64.3 122 36.9
Hma1.2p1_0269F.1_g107800 Hydrangea macrophylla HOM05D007435 ORTHO05D009338 1.1e-08 63.9 79 46.8
Sopen01g030130 Solanum pennellii HOM05D007435 ORTHO05D009338 1.1e-08 63.9 103 39.8
Potri.001G022500 Populus trichocarpa HOM05D007435 ORTHO05D009338 1.5e-08 63.5 120 44.2
Nitab4.5_0001775g0080 Nicotiana tabacum HOM05D007435 ORTHO05D009338 1.9e-08 63.2 104 39.4
Ciclev10032994m.g Citrus clementina HOM05D007435 ORTHO05D009338 2.5e-08 62.8 103 48.5
ECA248G3437 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.5e-08 62.8 102 41.2
Migut.N01821 Erythranthe guttata HOM05D007435 ORTHO05D009338 2.5e-08 62.8 133 36.1
Aqoxy1G00332 Aquilegia oxysepala HOM05D007435 ORTHO05D009338 4.3e-08 62.0 79 40.5
Gohir.D10G251200 Gossypium hirsutum HOM05D007435 ORTHO05D009338 4.3e-08 62.0 97 45.4
Gorai.011G291600 Gossypium raimondii HOM05D007435 ORTHO05D009338 4.3e-08 62.0 97 45.4
C01p07440 Brassica napus HOM05D007435 ORTHO05D009338 5.6e-08 61.6 98 38.8
BolC1t00726H Brassica oleracea HOM05D007435 ORTHO05D009338 5.6e-08 61.6 98 38.8
Gohir.A10G239300 Gossypium hirsutum HOM05D007435 ORTHO05D009338 5.6e-08 61.6 97 49.5
A03p60860 Brassica napus HOM05D007435 ORTHO05D009338 9.5e-08 60.8 135 34.1
BraA03t15122Z Brassica rapa HOM05D007435 ORTHO05D009338 9.5e-08 60.8 135 34.1
BcaC09g51937 Brassica carinata HOM05D007435 ORTHO05D009338 2.8e-07 59.3 95 37.9
Hund13323 Selenicereus undatus HOM05D000185 ORTHO05D000105 3.6e-07 58.9 63 52.4
PGR031G0502 Punica granatum HOM05D007435 ORTHO05D009338 6.1e-07 58.2 140 32.9
vmacro19756 Vaccinium macrocarpon HOM05D007435 ORTHO05D009338 8.0e-07 57.8 67 49.3


User provided reference genes

Program Settings