Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.11G139400 Glycine max HOM05D003862 ORTHO05D004398 4.4e-46 187.6 94 100.0
Glyma.12G063000 Glycine max HOM05D003862 ORTHO05D004398 9.9e-46 186.4 94 98.9
Lalb_Chr03g0026631 Lupinus albus HOM05D003862 ORTHO05D004398 1.6e-43 179.1 94 93.6
Lalb_Chr19g0137831 Lupinus albus HOM05D003862 ORTHO05D004398 2.1e-43 178.7 94 93.6
Lj3g0018643 Lotus japonicus HOM05D003862 ORTHO05D004398 4.6e-43 177.6 94 93.6
MD11G1108200 Malus domestica HOM05D003862 ORTHO05D004398 7.8e-43 176.8 94 92.6
Medtr4g063925 Medicago truncatula HOM05D003862 ORTHO05D004398 7.8e-43 176.8 94 91.5
Phvul.011G064100 Phaseolus vulgaris HOM05D003862 ORTHO05D004398 1.3e-42 176.0 94 90.4
Prupe.6G077400 Prunus persica HOM05D003862 ORTHO05D004398 1.3e-42 176.0 94 92.6
RcHm_v2.0_Chr5g0064531 Rosa chinensis HOM05D003862 ORTHO05D004398 1.3e-42 176.0 94 92.6
Cfa011504 Carpinus fangiana HOM05D003862 ORTHO05D004398 2.3e-42 175.3 94 92.6
Ca_19161_v3 Cicer arietinum L. HOM05D003862 ORTHO05D004398 8.7e-42 173.3 94 90.4
PGR119G1270 Punica granatum HOM05D003862 ORTHO05D004398 1.1e-41 172.9 94 91.5
CDE07G2069 Ceratophyllum demersum HOM05D003862 ORTHO05D004398 1.9e-41 172.2 94 90.4
PGR102G0842 Punica granatum HOM05D003862 ORTHO05D004398 2.5e-41 171.8 94 89.4
vmacro20157 Vaccinium macrocarpon HOM05D003862 ORTHO05D004398 2.5e-41 171.8 94 90.4
CiPaw.14G068400 Carya illinoinensis HOM05D003862 ORTHO05D004398 3.3e-41 171.4 94 90.4
FvH4_3g36110 Fragaria vesca HOM05D003862 ORTHO05D004398 3.3e-41 171.4 93 90.3
FAN11G3597 Fragaria x ananassa HOM05D003862 ORTHO05D004398 3.3e-41 171.4 93 90.3
FAN16G1598 Fragaria x ananassa HOM05D003862 ORTHO05D004398 3.3e-41 171.4 93 90.3
FAN21G0907 Fragaria x ananassa HOM05D003862 ORTHO05D004398 3.3e-41 171.4 93 90.3
FAN25G1864 Fragaria x ananassa HOM05D003862 ORTHO05D004398 3.3e-41 171.4 93 90.3
Cfa017379 Carpinus fangiana HOM05D003862 ORTHO05D004398 2.1e-40 168.7 94 89.4
Haze_20791 Corylus avellana HOM05D003862 ORTHO05D004398 2.1e-40 168.7 94 89.4
CSS0028919 Camellia sinensis var. sinensis HOM05D003862 ORTHO05D004398 3.6e-40 167.9 94 89.4
CSS0038231 Camellia sinensis var. sinensis HOM05D003862 ORTHO05D004398 3.6e-40 167.9 94 89.4
Oeu014415.1 Olea europaea HOM05D003862 ORTHO05D004398 3.6e-40 167.9 94 89.4
TPR.G17728 Trifolium pratense HOM05D003862 ORTHO05D004398 3.6e-40 167.9 94 89.4
Cc10_g12100 Coffea canephora HOM05D003862 ORTHO05D004398 4.8e-40 167.5 94 88.3
Oeu032100.1 Olea europaea HOM05D003862 ORTHO05D004398 4.8e-40 167.5 94 89.4
arahy.Tifrunner.gnm1.ann1.Q4VW5J Arachis hypogaea HOM05D003862 ORTHO05D004398 6.2e-40 167.2 94 86.2
unitig_21.g20465 Utricularia gibba HOM05D003164 ORTHO05D003575 6.2e-40 167.2 93 86.0
GSVIVG01024961001 Vitis vinifera HOM05D003862 ORTHO05D004398 8.1e-40 166.8 94 88.3
CiPaw.09G192600 Carya illinoinensis HOM05D003862 ORTHO05D004398 1.1e-39 166.4 94 88.3
MBI05_g22042_MAGBIO Magnolia biondii HOM05D003862 ORTHO05D004398 1.1e-39 166.4 94 88.3
Nitab4.5_0000349g0310 Nicotiana tabacum HOM05D003862 ORTHO05D004398 1.1e-39 166.4 94 87.2
Nitab4.5_0001911g0090 Nicotiana tabacum HOM05D003862 ORTHO05D004398 1.1e-39 166.4 94 87.2
arahy.Tifrunner.gnm1.ann1.PAA8CG Arachis hypogaea HOM05D003862 ORTHO05D004398 1.4e-39 166.0 94 85.1
Migut.D00467 Erythranthe guttata HOM05D003862 ORTHO05D004398 1.8e-39 165.6 94 86.2
unitig_744.g24379 Utricularia gibba HOM05D003862 ORTHO05D004398 1.8e-39 165.6 93 84.9
HPP92_018126 Vanilla planifolia HOM05D003862 ORTHO05D004398 2.4e-39 165.2 94 86.2
HPP92_018144 Vanilla planifolia HOM05D003862 ORTHO05D004398 2.4e-39 165.2 94 86.2
Ah.02g115390 Amaranthus hybridus HOM05D003862 ORTHO05D004398 3.1e-39 164.9 94 84.0
Nitab4.5_0006455g0030 Nicotiana tabacum HOM05D003862 ORTHO05D004398 3.1e-39 164.9 94 87.2
Dinv17003 Davidia involucrata HOM05D003862 ORTHO05D004398 4.0e-39 164.5 94 87.2
Dinv42952 Davidia involucrata HOM05D003862 ORTHO05D004398 4.0e-39 164.5 94 87.2
Dinv43148 Davidia involucrata HOM05D003862 ORTHO05D004398 4.0e-39 164.5 94 87.2
Hma1.2p1_0936F.1_g238710 Hydrangea macrophylla HOM05D003862 ORTHO05D004398 4.0e-39 164.5 94 86.2
Hma1.2p1_1513F.1_g287975 Hydrangea macrophylla HOM05D003862 ORTHO05D004398 4.0e-39 164.5 94 86.2
SalBow5G2575 Salvia bowleyana HOM05D003862 ORTHO05D004398 4.0e-39 164.5 94 86.2
TAR636G2804 Trochodendron aralioides HOM05D003862 ORTHO05D004398 4.0e-39 164.5 94 86.2
Nitab4.5_0002018g0010 Nicotiana tabacum HOM05D003862 ORTHO05D004398 5.3e-39 164.1 94 86.2
GSVIVG01034172001 Vitis vinifera HOM05D003862 ORTHO05D004398 6.9e-39 163.7 94 87.2
CAN.G1195.10 Capsicum annuum HOM05D003862 ORTHO05D004398 1.2e-38 162.9 94 84.0
MELO3C009258.2 Cucumis melo HOM05D003862 ORTHO05D004398 1.2e-38 162.9 94 85.1
CsaV3_3G034900 Cucumis sativus L. HOM05D003862 ORTHO05D004398 1.2e-38 162.9 94 85.1
Os12g0571200 Oryza sativa ssp. japonica HOM05D003862 ORTHO05D004398 1.2e-38 162.9 94 84.0
PGSC0003DMG400019201 Solanum tuberosum HOM05D003862 ORTHO05D004398 1.2e-38 162.9 94 84.0
TAR369G0814 Trochodendron aralioides HOM05D003862 ORTHO05D004398 1.2e-38 162.9 94 86.2
Solyc10g086510.2 Solanum lycopersicum HOM05D003862 ORTHO05D004398 1.5e-38 162.5 94 84.0
Sopen10g035890 Solanum pennellii HOM05D003862 ORTHO05D004398 1.5e-38 162.5 94 84.0
TPR.G14480 Trifolium pratense HOM05D003862 ORTHO05D004398 1.5e-38 162.5 94 87.2
AUR62038108 Chenopodium quinoa HOM05D003862 ORTHO05D004398 2.0e-38 162.2 94 83.0
Migut.D01636 Erythranthe guttata HOM05D003862 ORTHO05D004398 2.0e-38 162.2 94 84.0
Cfa016018 Carpinus fangiana HOM05D000273 ORTHO05D004398 2.6e-38 161.8 94 88.3
ClCG10G021140 Citrullus lanatus HOM05D003862 ORTHO05D004398 2.6e-38 161.8 94 84.0
Sed0022625 Sechium edule HOM05D003862 ORTHO05D004398 2.6e-38 161.8 94 85.1
Peaxi162Scf00330g00415 Petunia axillaris HOM05D003862 ORTHO05D004398 3.4e-38 161.4 94 81.9
CANSAT54G2947 Cannabis sativa HOM05D003862 ORTHO05D004398 4.5e-38 161.0 95 86.3
Sed0018689 Sechium edule HOM05D003862 ORTHO05D004398 4.5e-38 161.0 94 85.1
PSO063G5647 Papaver somniferum HOM05D003862 ORTHO05D004398 5.8e-38 160.6 93 80.6
PSO339G2698 Papaver somniferum HOM05D003862 ORTHO05D004398 5.8e-38 160.6 93 80.6
PSO384G2795 Papaver somniferum HOM05D003862 ORTHO05D004398 5.8e-38 160.6 93 80.6
AUR62025808 Chenopodium quinoa HOM05D003862 ORTHO05D004398 7.6e-38 160.2 94 81.9
DCAR_030095 Daucus carota HOM05D003862 ORTHO05D004398 7.6e-38 160.2 94 84.0
RcHm_v2.0_Chr3g0466561 Rosa chinensis HOM05D003862 ORTHO05D004398 7.6e-38 160.2 96 85.4
HanXRQChr05g0136091 Helianthus annuus HOM05D003862 ORTHO05D004398 9.9e-38 159.8 93 82.8
TWI36G0288 Tripterygium wilfordii HOM05D003862 ORTHO05D004398 9.9e-38 159.8 94 84.0
MD04G1129100 Malus domestica HOM05D003862 ORTHO05D004398 1.3e-37 159.5 95 84.2
Hund10643 Selenicereus undatus HOM05D003862 ORTHO05D004398 1.3e-37 159.5 94 81.9
EL10Ac5g11591 Beta vulgaris HOM05D003862 ORTHO05D004398 2.2e-37 158.7 94 80.9
Prupe.6G255300 Prunus persica HOM05D003862 ORTHO05D004398 3.8e-37 157.9 95 83.2
Lsat_1_v5_gn_4_177081 Lactuca sativa HOM05D003862 ORTHO05D004398 4.9e-37 157.5 94 81.9
Lsat_1_v5_gn_5_170681 Lactuca sativa HOM05D003862 ORTHO05D004398 4.9e-37 157.5 94 81.9
TWI75G0870 Tripterygium wilfordii HOM05D003862 ORTHO05D004398 4.9e-37 157.5 94 81.9
Rhsim05G0192800 Rhododendron simsii HOM05D003862 ORTHO05D004398 8.4e-37 156.8 117 71.8
MD12G1141800 Malus domestica HOM05D003862 ORTHO05D004398 3.2e-36 154.8 95 82.1
THA.LOC104810779 Tarenaya hassleriana HOM05D003862 ORTHO05D004398 7.1e-36 153.7 94 81.9
Cpa.g.sc81.150 Carica papaya HOM05D003862 ORTHO05D004398 9.3e-36 153.3 94 80.9
Ciclev10029679m.g Citrus clementina HOM05D003862 ORTHO05D004398 9.3e-36 153.3 94 80.9
Sp2g01740 Schrenkiella parvula HOM05D003862 ORTHO05D004398 9.3e-36 153.3 94 80.9
AT3G46560 Arabidopsis thaliana HOM05D003862 ORTHO05D004398 1.2e-35 152.9 94 80.9
Gohir.D13G233100 Gossypium hirsutum HOM05D003862 ORTHO05D004398 1.2e-35 152.9 94 79.8
Gorai.013G263900 Gossypium raimondii HOM05D003862 ORTHO05D004398 1.2e-35 152.9 94 79.8
Peaxi162Scf01517g00013 Petunia axillaris HOM05D003862 ORTHO05D004398 1.2e-35 152.9 92 79.3
THA.LOC104799442 Tarenaya hassleriana HOM05D003862 ORTHO05D004398 1.6e-35 152.5 94 80.9
TWI31G1113 Tripterygium wilfordii HOM05D003862 ORTHO05D004398 1.6e-35 152.5 94 79.8
MD03G1093400 Malus domestica HOM05D003862 ORTHO05D004398 2.1e-35 152.1 81 91.4
Duzib150G0578 Durio zibethinus HOM05D003862 ORTHO05D004398 2.7e-35 151.8 94 79.8
Duzib168G1372 Durio zibethinus HOM05D003862 ORTHO05D004398 2.7e-35 151.8 94 79.8
Duzib170G0179 Durio zibethinus HOM05D003862 ORTHO05D004398 2.7e-35 151.8 94 79.8
Thhalv10002743m.g Eutrema salsugineum HOM05D003862 ORTHO05D004398 2.7e-35 151.8 94 79.8
Gohir.D03G125700 Gossypium hirsutum HOM05D003862 ORTHO05D004398 2.7e-35 151.8 94 79.8
Gorai.003G131900 Gossypium raimondii HOM05D003862 ORTHO05D004398 2.7e-35 151.8 94 79.8
VMungo1127G0240 Vigna mungo HOM05D003862 ORTHO05D004398 2.7e-35 151.8 81 90.1
Carub.0005s1283 Capsella rubella HOM05D003862 ORTHO05D004398 3.5e-35 151.4 94 79.8
COL.COLO4_18508 Corchorus olitorius HOM05D003862 ORTHO05D004398 3.5e-35 151.4 94 78.7
Gohir.A03G042066 Gossypium hirsutum HOM05D003862 ORTHO05D004398 3.5e-35 151.4 94 78.7
Actinidia05313 Actinidia chinensis HOM05D003862 ORTHO05D004398 4.6e-35 151.0 87 85.1
Gohir.A13G227500 Gossypium hirsutum HOM05D003862 ORTHO05D004398 4.6e-35 151.0 94 78.7
Thecc.09G321500 Theobroma cacao HOM05D003862 ORTHO05D004398 4.6e-35 151.0 94 79.8
AL5G25420 Arabidopsis lyrata HOM05D003862 ORTHO05D004398 6.0e-35 150.6 94 79.8
Thhalv10023780m.g Eutrema salsugineum HOM05D003862 ORTHO05D004398 6.0e-35 150.6 94 78.7
ECA248G1530 Erigeron canadensis HOM05D003862 ORTHO05D004398 1.3e-34 149.4 94 75.5
Manes.02G133100 Manihot esculenta HOM05D003862 ORTHO05D004398 5.1e-34 147.5 93 76.3
Sc05g0009640 Simmondsia chinensis HOM05D003862 ORTHO05D004398 5.1e-34 147.5 94 74.5
CARHR155240 Cardamine hirsuta HOM05D003862 ORTHO05D004398 8.7e-34 146.7 94 76.6
Manes.01G173900 Manihot esculenta HOM05D003862 ORTHO05D004398 1.5e-33 146.0 93 75.3
BcaC04g22454 Brassica carinata HOM05D003862 ORTHO05D004398 1.9e-33 145.6 94 76.6
A09p15900 Brassica napus HOM05D003862 ORTHO05D004398 1.9e-33 145.6 94 76.6
C09p19140 Brassica napus HOM05D003862 ORTHO05D004398 1.9e-33 145.6 94 76.6
BolC9t54821H Brassica oleracea HOM05D003862 ORTHO05D004398 1.9e-33 145.6 94 76.6
BraA09t37226Z Brassica rapa HOM05D003862 ORTHO05D004398 1.9e-33 145.6 94 76.6
Carub.0003s2691 Capsella rubella HOM05D003862 ORTHO05D004398 1.9e-33 145.6 94 75.5
Potri.012G039100 Populus trichocarpa HOM05D003862 ORTHO05D004398 7.4e-33 143.7 93 74.2
Sabra12G0027600 Salix brachista HOM05D003862 ORTHO05D004398 7.4e-33 143.7 93 74.2
Aa31sc23G440 Aethionema arabicum HOM05D003862 ORTHO05D004398 9.6e-33 143.3 94 73.4
BcaC02g10413 Brassica carinata HOM05D003862 ORTHO05D004398 1.3e-32 142.9 94 75.5
C04p29160 Brassica napus HOM05D003862 ORTHO05D004398 1.3e-32 142.9 94 75.5
BolC4t24450H Brassica oleracea HOM05D003862 ORTHO05D004398 1.3e-32 142.9 94 75.5
FAN02G2377 Fragaria x ananassa HOM05D003862 ORTHO05D004398 1.6e-32 142.5 95 75.8
FAN09G4075 Fragaria x ananassa HOM05D003862 ORTHO05D004398 1.6e-32 142.5 95 75.8
Pp3c24_15930 Physcomitrium patens HOM05D003862 ORTHO05D004398 1.6e-32 142.5 88 76.1
Aa31LG4G15560 Aethionema arabicum HOM05D003862 ORTHO05D004398 3.7e-32 141.4 94 74.5
A03p68180 Brassica napus HOM05D003862 ORTHO05D004398 8.1e-32 140.2 94 74.5
BraA01t02647Z Brassica rapa HOM05D003862 ORTHO05D004398 8.1e-32 140.2 94 74.5
FvH4_6g13690 Fragaria vesca HOM05D003862 ORTHO05D004398 8.1e-32 140.2 95 74.7
AagrBONN_evm.TU.Sc2ySwM_368.1516 Anthoceros agrestis HOM05D003862 ORTHO05D004398 1.1e-31 139.8 88 75.0
BcaB07g31364 Brassica carinata HOM05D003862 ORTHO05D004398 1.1e-31 139.8 94 73.4
vmacro08654 Vaccinium macrocarpon HOM05D003862 ORTHO05D004398 1.1e-31 139.8 150 54.0
ATR0559G041 Amborella trichopoda HOM05D003862 ORTHO05D004398 1.4e-31 139.4 81 82.7
Mapoly0020s0168 Marchantia polymorpha HOM05D003862 ORTHO05D004398 1.4e-31 139.4 89 73.0
HanXRQChr01g0009491 Helianthus annuus HOM05D003862 ORTHO05D004398 3.1e-31 138.3 90 72.2
Glyma.03G082300 Glycine max HOM05D003862 ORTHO05D004398 4.0e-31 137.9 93 67.7
Aqoxy4G02928 Aquilegia oxysepala HOM05D003862 ORTHO05D004398 6.9e-31 137.1 93 68.8
Lj3g0015625 Lotus japonicus HOM05D003862 ORTHO05D004398 9.0e-31 136.7 93 68.8
Phvul.L001624 Phaseolus vulgaris HOM05D003862 ORTHO05D004398 9.0e-31 136.7 93 67.7
Hund04959 Selenicereus undatus HOM05D003862 ORTHO05D004398 1.5e-30 136.0 94 69.1
arahy.Tifrunner.gnm1.ann1.817FQF Arachis hypogaea HOM05D003862 ORTHO05D004398 5.8e-30 134.0 91 70.3
arahy.Tifrunner.gnm1.ann1.JG2TRE Arachis hypogaea HOM05D003862 ORTHO05D004398 5.8e-30 134.0 91 70.3
QL07p048307 Quercus lobata HOM05D003862 ORTHO05D004398 1.3e-29 132.9 158 49.4
Actinidia11257 Actinidia chinensis HOM05D003862 ORTHO05D004398 2.9e-29 131.7 78 85.9
arahy.Tifrunner.gnm1.ann1.GD7L84 Arachis hypogaea HOM05D003862 ORTHO05D004398 2.9e-29 131.7 91 69.2
Pp3c20_6200 Physcomitrium patens HOM05D003862 ORTHO05D004398 3.8e-29 131.3 88 70.5
arahy.Tifrunner.gnm1.ann1.L1N949 Arachis hypogaea HOM05D003862 ORTHO05D004398 6.4e-29 130.6 91 68.1
Haze_24096 Corylus avellana HOM05D003862 ORTHO05D004398 1.1e-28 129.8 76 82.9
QL01p031927 Quercus lobata HOM05D003862 ORTHO05D004398 3.2e-28 128.3 62 96.8
PGR004G0102 Punica granatum HOM05D003862 ORTHO05D004398 4.6e-27 124.4 90 67.8
TPR.G5603 Trifolium pratense HOM05D003862 ORTHO05D004398 7.9e-27 123.6 93 60.2
Psat7g239120 Pisum sativum HOM05D003862 ORTHO05D004398 1.8e-26 122.5 93 57.0
Eucgr.A01265 Eucalyptus grandis HOM05D003862 ORTHO05D004398 3.9e-26 121.3 87 69.0
Nn2g14532 Nelumbo nucifera HOM05D003862 ORTHO05D004398 3.9e-26 121.3 69 84.1
FAN27G3302 Fragaria x ananassa HOM05D003862 ORTHO05D004398 8.7e-26 120.2 95 64.2
SMO367G0781 Selaginella moellendorffii HOM05D003862 ORTHO05D004398 1.5e-25 119.4 87 65.5
Sc20g0004910 Simmondsia chinensis HOM05D003862 ORTHO05D004398 2.5e-25 118.6 63 88.9
Dinv37171 Davidia involucrata HOM05D003862 ORTHO05D004398 5.6e-25 117.5 62 90.3
CAN.G326.7 Capsicum annuum HOM05D003862 ORTHO05D004398 1.3e-24 116.3 63 85.7
CBR_g46834 Chara braunii HOM05D003862 ORTHO05D004398 2.8e-24 115.2 94 60.6
MCO12G250 Micromonas commoda HOM05D003862 ORTHO05D004398 4.8e-24 114.4 92 58.7
SalBow2G1777 Salvia bowleyana HOM05D003862 ORTHO05D004398 6.2e-24 114.0 93 62.4
MBI14_g20103_MAGBIO Magnolia biondii HOM05D003862 ORTHO05D004398 8.2e-24 113.6 94 68.1
Peaxi162Scf00165g00129 Petunia axillaris HOM05D003862 ORTHO05D004398 1.0e-21 106.7 84 65.5
FAN14G4115 Fragaria x ananassa HOM05D003862 ORTHO05D004398 1.3e-21 106.3 95 64.2
unitig_6.g29269 Utricularia gibba HOM05D003862 ORTHO05D004398 8.4e-21 103.6 90 60.0
unitig_747.g21430 Utricularia gibba HOM05D003862 ORTHO05D004398 8.4e-21 103.6 90 60.0
Solyc08g048070.1 Solanum lycopersicum HOM05D003862 ORTHO05D004398 1.6e-19 99.4 67 70.1
Medtr4g021715 Medicago truncatula HOM05D003862 ORTHO05D004398 5.3e-15 84.3 93 46.2
PRCOL_00005138 Prasinoderma coloniale HOM05D003862 ORTHO05D004398 5.3e-15 84.3 73 52.1
Cre01.g033400 Chlamydomonas reinhardtii HOM05D003862 ORTHO05D004398 9.0e-15 83.6 79 48.1
Os05g0111100 Oryza sativa ssp. japonica HOM05D003862 ORTHO05D004398 1.1e-12 76.6 78 48.7
SHI25717 Sapria himalayana HOM05D003862 ORTHO05D004398 8.2e-08 60.5 61 50.8
CDE04G1893 Ceratophyllum demersum HOM05D004676 ORTHO05D005661 2.0e-06 55.8 40 67.5


User provided reference genes

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