Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.11G102300 Glycine max HOM05D007631 ORTHO05D009566 5.1e-142 507.7 248 100.0
VMungo1127G1566 Vigna mungo HOM05D007631 ORTHO05D009566 1.4e-110 403.3 251 82.1
Lj3g0001232 Lotus japonicus HOM05D007631 ORTHO05D009566 8.8e-102 374.0 250 76.4
Medtr4g074590 Medicago truncatula HOM05D007631 ORTHO05D009566 9.5e-96 354.0 249 72.7
Lalb_Chr03g0024841 Lupinus albus HOM05D007631 ORTHO05D009566 1.8e-94 349.7 249 71.1
Ca_03026_v3 Cicer arietinum L. HOM05D007631 ORTHO05D009566 6.8e-94 347.8 254 71.3
Phvul.011G031300 Phaseolus vulgaris HOM05D007631 ORTHO05D009566 1.2e-87 327.0 252 70.2
TPR.G32328 Trifolium pratense HOM05D007631 ORTHO05D009566 1.2e-87 327.0 255 67.1
arahy.Tifrunner.gnm1.ann1.C4PR70 Arachis hypogaea HOM05D007631 ORTHO05D009566 3.6e-87 325.5 275 64.0
Psat7g173560 Pisum sativum HOM05D007631 ORTHO05D009566 1.6e-74 283.5 212 68.9
Ciclev10032529m.g Citrus clementina HOM05D007631 ORTHO05D009566 4.0e-70 268.9 227 57.7
Potri.005G094700 Populus trichocarpa HOM05D007631 ORTHO05D009566 6.8e-70 268.1 249 56.6
CiPaw.09G164100 Carya illinoinensis HOM05D007631 ORTHO05D009566 2.0e-69 266.5 246 60.2
Manes.04G066700 Manihot esculenta HOM05D007631 ORTHO05D009566 9.2e-67 257.7 250 56.0
FAN12G2650 Fragaria x ananassa HOM05D007631 ORTHO05D009566 1.2e-66 257.3 256 53.5
TWI53G1419 Tripterygium wilfordii HOM05D007631 ORTHO05D009566 4.6e-66 255.4 247 56.7
Duzib268G1119 Durio zibethinus HOM05D007631 ORTHO05D009566 6.0e-66 255.0 249 55.0
CsaV3_3G031500 Cucumis sativus L. HOM05D007631 ORTHO05D009566 1.3e-65 253.8 248 54.4
Eucgr.J00853 Eucalyptus grandis HOM05D007631 ORTHO05D009566 3.0e-65 252.7 216 59.3
ClCG10G011860 Citrullus lanatus HOM05D007631 ORTHO05D009566 5.1e-65 251.9 190 63.2
CsaV3_3G032520 Cucumis sativus L. HOM05D007631 ORTHO05D009566 8.6e-65 251.1 250 53.2
Gohir.A03G110300 Gossypium hirsutum HOM05D007631 ORTHO05D009566 2.5e-64 249.6 251 54.2
FAN07G2143 Fragaria x ananassa HOM05D007631 ORTHO05D009566 5.6e-64 248.4 266 52.3
Gohir.D02G134900 Gossypium hirsutum HOM05D007631 ORTHO05D009566 6.8e-62 241.5 251 52.6
MELO3C024033.2 Cucumis melo HOM05D007631 ORTHO05D009566 1.5e-61 240.4 185 62.7
AUR62015208 Chenopodium quinoa HOM05D007631 ORTHO05D009566 5.8e-61 238.4 247 50.2
EL10Ac9g22926 Beta vulgaris HOM05D007631 ORTHO05D009566 3.8e-60 235.7 245 51.4
MD16G1250700 Malus domestica HOM05D007631 ORTHO05D009566 8.4e-60 234.6 244 50.4
PGR119G1778 Punica granatum HOM05D007631 ORTHO05D009566 1.1e-59 234.2 200 58.0
Nn4g24939 Nelumbo nucifera HOM05D007631 ORTHO05D009566 1.4e-59 233.8 245 52.7
Aa31LG8G6570 Aethionema arabicum HOM05D007631 ORTHO05D009566 7.1e-59 231.5 202 56.9
CANSAT64G0359 Cannabis sativa HOM05D007631 ORTHO05D009566 4.6e-58 228.8 189 56.1
Sp3g17810 Schrenkiella parvula HOM05D007631 ORTHO05D009566 6.0e-58 228.4 198 57.1
AT3G19800 Arabidopsis thaliana HOM05D007631 ORTHO05D009566 3.9e-57 225.7 193 57.0
A01p34940 Brassica napus HOM05D007631 ORTHO05D009566 6.6e-57 224.9 183 60.1
C01p44350 Brassica napus HOM05D007631 ORTHO05D009566 6.6e-57 224.9 184 59.8
BolC1t04400H Brassica oleracea HOM05D007631 ORTHO05D009566 6.6e-57 224.9 184 59.8
BraA01t03577Z Brassica rapa HOM05D007631 ORTHO05D009566 6.6e-57 224.9 183 60.1
Thhalv10021444m.g Eutrema salsugineum HOM05D007631 ORTHO05D009566 2.5e-56 223.0 202 55.0
Lsat_1_v5_gn_3_33601 Lactuca sativa HOM05D007631 ORTHO05D009566 3.3e-56 222.6 222 52.7
ECA246G0740 Erigeron canadensis HOM05D007631 ORTHO05D009566 5.6e-56 221.9 204 55.9
AL3G33250 Arabidopsis lyrata HOM05D007631 ORTHO05D009566 7.3e-56 221.5 199 55.3
Hma1.2p1_0499F.1_g166830 Hydrangea macrophylla HOM05D007631 ORTHO05D009566 7.3e-56 221.5 252 51.6
Carub.0003s1968 Capsella rubella HOM05D007631 ORTHO05D009566 3.6e-55 219.2 187 57.8
Dinv17601 Davidia involucrata HOM05D007631 ORTHO05D009566 4.7e-55 218.8 243 51.0
COL.COLO4_27670 Corchorus olitorius HOM05D007631 ORTHO05D009566 1.1e-54 217.6 248 51.2
Cc11_g05090 Coffea canephora HOM05D007631 ORTHO05D009566 1.8e-54 216.9 206 53.9
CAN.G157.15 Capsicum annuum HOM05D007631 ORTHO05D009566 5.3e-54 215.3 191 56.0
CARHR095310 Cardamine hirsuta HOM05D007631 ORTHO05D009566 1.5e-53 213.8 203 54.7
GSVIVG01010153001 Vitis vinifera HOM05D007631 ORTHO05D009566 1.7e-52 210.3 247 49.4
Nitab4.5_0002392g0040 Nicotiana tabacum HOM05D007631 ORTHO05D009566 2.9e-52 209.5 246 48.8
Sopen02g009160 Solanum pennellii HOM05D007631 ORTHO05D009566 2.9e-52 209.5 186 54.8
PGSC0003DMG400029978 Solanum tuberosum HOM05D007631 ORTHO05D009566 6.4e-52 208.4 185 56.8
PSO478G5292 Papaver somniferum HOM05D007631 ORTHO05D009566 2.4e-51 206.5 201 52.7
Solyc02g055440.4 Solanum lycopersicum HOM05D007631 ORTHO05D009566 3.2e-51 206.1 186 54.3
FAN17G2236 Fragaria x ananassa HOM05D007631 ORTHO05D009566 2.1e-50 203.4 220 50.5
SalBow6G3201 Salvia bowleyana HOM05D007631 ORTHO05D009566 2.7e-50 203.0 222 46.8
Haze_20362 Corylus avellana HOM05D007631 ORTHO05D009566 7.3e-48 194.9 268 44.8
Hund24286 Selenicereus undatus HOM05D007631 ORTHO05D009566 4.8e-47 192.2 202 48.5
HanXRQChr17g0540801 Helianthus annuus HOM05D007631 ORTHO05D009566 8.1e-47 191.4 178 54.5
Sed0008358 Sechium edule HOM05D007631 ORTHO05D009566 2.0e-45 186.8 250 44.0
HPP92_025628 Vanilla planifolia HOM05D007631 ORTHO05D009566 1.9e-43 180.3 237 42.2
FvH4_4g07430 Fragaria vesca HOM05D007631 ORTHO05D009566 2.4e-43 179.9 178 52.2
PSO017G5087 Papaver somniferum HOM05D007631 ORTHO05D009566 9.3e-43 177.9 230 43.9
Thecc.02G311600 Theobroma cacao HOM05D007631 ORTHO05D009566 9.3e-43 177.9 179 52.5
vmacro10901 Vaccinium macrocarpon HOM05D007631 ORTHO05D009566 9.3e-43 177.9 248 41.1
RcHm_v2.0_Chr4g0399891 Rosa chinensis HOM05D007631 ORTHO05D009566 1.2e-42 177.6 178 50.6
unitig_699.g19551 Utricularia gibba HOM05D007631 ORTHO05D009566 6.0e-42 175.3 212 44.3
DCAR_030399 Daucus carota HOM05D007631 ORTHO05D009566 6.7e-41 171.8 271 41.0
Os04g0525000 Oryza sativa ssp. japonica HOM05D007631 ORTHO05D009566 1.3e-39 167.5 205 44.9
Prupe.1G077300 Prunus persica HOM05D007631 ORTHO05D009566 4.0e-38 162.5 178 51.7
Zm00001eb076870 Zea mays HOM05D007631 ORTHO05D009566 5.3e-38 162.2 225 41.3
Cpa.g.sc63.2 Carica papaya HOM05D007631 ORTHO05D009566 2.0e-37 160.2 114 65.8
Gorai.005G150800 Gossypium raimondii HOM05D007631 ORTHO05D009566 3.4e-37 159.5 180 50.0
Sc10g0006760 Simmondsia chinensis HOM05D007631 ORTHO05D009566 4.5e-37 159.1 199 41.7
QL03p043760 Quercus lobata HOM05D007631 ORTHO05D009566 1.7e-36 157.1 109 66.1
Oeu033537.1 Olea europaea HOM05D007631 ORTHO05D009566 1.9e-35 153.7 147 53.1
arahy.Tifrunner.gnm1.ann1.GZ47R7 Arachis hypogaea HOM05D007631 ORTHO05D009566 1.3e-33 147.5 123 63.4
Atru.chr11.1322 Acer truncatum HOM05D007631 ORTHO05D009566 8.7e-33 144.8 113 61.1
CDE05G3190 Ceratophyllum demersum HOM05D005588 ORTHO05D006615 7.4e-32 141.7 159 47.8
SGA_v2.0_scaffold88G27232 Striga asiatica HOM05D007631 ORTHO05D009566 7.4e-32 141.7 128 51.6
FAN22G0357 Fragaria x ananassa HOM05D007631 ORTHO05D009566 1.3e-31 141.0 153 49.7
MBI06_g36505_MAGBIO Magnolia biondii HOM05D007631 ORTHO05D009566 1.1e-30 137.9 165 49.1
ATR0618G124 Amborella trichopoda HOM05D007631 ORTHO05D009566 1.8e-30 137.1 131 51.1
Atru.BG.289.p Acer truncatum HOM05D007631 ORTHO05D009566 3.9e-25 119.4 91 61.5
Aqoxy7G02010 Aquilegia oxysepala HOM05D007631 ORTHO05D009566 6.7e-25 118.6 187 39.6
TAR622G1133 Trochodendron aralioides HOM05D007631 ORTHO05D009566 4.8e-23 112.5 122 47.5
Peaxi162Scf00363g00724 Petunia axillaris HOM05D007631 ORTHO05D009566 1.1e-22 111.3 96 59.4
Migut.E00703 Erythranthe guttata HOM05D007631 ORTHO05D009566 4.5e-21 105.9 109 51.4
Migut.E00614 Erythranthe guttata HOM05D007631 ORTHO05D009566 5.9e-21 105.5 109 51.4
Cfa019889 Carpinus fangiana HOM05D007631 ORTHO05D009566 4.6e-18 95.9 78 56.4
Nitab4.5_0000139g0130 Nicotiana tabacum HOM05D007631 ORTHO05D009566 6.3e-15 85.5 247 30.4
arahy.Tifrunner.gnm1.ann1.1HI7LS Arachis hypogaea HOM05D037061 ORTHO05D009566 6.9e-14 82.0 121 41.3
arahy.Tifrunner.gnm1.ann1.M2YCYK Arachis hypogaea HOM05D007631 ORTHO05D009566 2.5e-11 73.6 85 49.4
arahy.Tifrunner.gnm1.ann1.3PEX26 Arachis hypogaea HOM05D037061 ORTHO05D009566 2.1e-10 70.5 46 71.7
CSS0013150 Camellia sinensis var. sinensis HOM05D007631 ORTHO05D009566 2.7e-10 70.1 57 61.4
SGA_v2.0_scaffold88G27234 Striga asiatica HOM05D007631 ORTHO05D009566 3.0e-09 66.6 82 46.3


User provided reference genes

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